Lbel007133.1
Basic Information
- Insect
- Lysandra bellargus
- Gene Symbol
- -
- Assembly
- GCA_905333045.1
- Location
- HG995359.1:8022667-8046756[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.4e-09 2.4e-06 27.8 0.0 2 39 153 191 152 195 0.90 2 4 3.8e-12 2.1e-09 37.6 0.1 1 39 206 244 206 247 0.94 3 4 2.8e-14 1.5e-11 44.5 0.3 2 45 262 305 261 305 0.96 4 4 1.2e-16 6.6e-14 52.0 0.0 2 40 313 352 312 354 0.93
Sequence Information
- Coding Sequence
- ATGCCCGGCCACGATTTTAAACCGATTAAATGCGAGCCAACGACGGAAGATGATATTAGCCAGCAGATCACTATGGACATGTGGTATCACACGGAGTCGCATCTGCAGCCAGTCGCCAATCACTTGTTGCATCAGTTGCACGGTACCCTGGAAGAGCTAGCGCCTGCGCCGGCGGGGCCCGCCGCGACGCCGGTGGAGGAGCACCTCCCGTCACCGACGGAGGCGTCGCTGGCCACTCTTCAACCTGCACCCGTAGGAAATACGATGGGTAGTTCAATAATCGACATGCACGCGAAGATGATGAGCGTAACGGAAGTGGCCGACTCCGGGGACTTCGTGCCACTCATGTCGGTCAAGGATGAGCTGTCCGAGAGTGAGCAGCAACAGAGCAGCGACGACACCAGCGACTCCGCCCCGGAGCAGGCGGTGGGCCGCGGGAGCCCCAAGGCGTGGTCGCCGCAGGACATGGACAGCGCGCTCGACGCGCTCCGGACACACAACATGACTCTCACTAAGGCGTCAGCGACGTTCGGCATCCCGTCAACAACGCTATGGCAGCGCGCGCACCGCCTCGGCATAGACACGCCGAAGAAAGATGGCGCCTCCAAATCCTGGAGCGAGGATGACCTGAAGGCGGCGTTGGACGCACTACGCGCCGGCACCATCTCCGCTAACAAAGCTAGCAAAGCTTATGGCATCCCCAGCAGCACTCTGTACAAGATAGCGCGGCGCGAGGGCATCCGTCTGGCGGCGCCGTTCAACGCCGCGCCCACCGCGTGGCGGCGCGCCGACCTCGCGCGCGCGCTCGCTGCCGTGCGTGCGGGCGCCGCCGTGCAACGTGCCGCGTCGCACTATGGTATACCCACAGGAACTCTATACGGACGGTGCAAGCGAGAGGGAATAGAGCTGTCTCGCTCTAACCCGACGCCGTGGTCGGAAGGCGCTATGGAGGAGGCGTTGGAAGCTGTCAGGGTGGGTCAGATGTCGATCAACCAGGCGGCCATCTACTTCAACCTGCCCTACTCGTCGCTGTACGGCCGCTTCAAGCGCTGCAAGATCCAGCCGCCGCAGGGCATCCAACCTTCAAGTCACATGGAGTTCTCTGAACAAATGGATCATCAGTTCTCTCCGGACATGATATCCGGTTTGGATGACATACACCGGACATATACCCTGGCGGATGTCCTGGATGTACAGTCGCGCACACAAGAGTCAAACGACGAGTACACTGTACAGCCGCGAACAAAAGCGGAACATAGCGTATCGTATGTACAGTCGCGATCACCAGACTCATCTAAAAGGCAGGTCTATCAAGAGGTACAAAAGAACACTGAGCTGCAATCTGCACACGCACCTGTACAATCACGACCACAAGCGGAGCTAGGACCGTATGTACAGACGCGAACACTCGAATCTATGGATATGCGACCAGACGTTCAAGAATTTCAGTCAGAAGGGCGTCTACAAACTGCGCCTGTACATTCGCGACCACAAGTGCATTCACTAGTCAACTCGTACGTACAGTCGCGAACACTCGAATCCCTGGATGAGCGACAAGACTTACAGCGAGAGCTTAAGTCGAGTGAAGGGCGTCTACAAACTGCGCCTCTACAGTCGCGTCCACAAGTGCATTCACTAGTCAACTCGTACGTACAGTCGCGAACACTCGAATCCCTGGATAAGCGACAAGACTTACAGCGAGAGTTTCAGTCGAGTGAGGGGCGTCTACAAACTGCGCCTCTACAGTCGCGACCACAAGTGCATTCACTAGTACAGTCGCGAACTATTCAGTCCATTGATAAGCGACACGACGAGCAGGTACAGTCGGGCGCAGAAGTGCGGGCGTTTAGCGGCGTGCGTCAAGCTCTGTACGCGCTCGAGCCGTGCGGCCCCGCCTACTGCGTCGCCAGCTGA
- Protein Sequence
- MPGHDFKPIKCEPTTEDDISQQITMDMWYHTESHLQPVANHLLHQLHGTLEELAPAPAGPAATPVEEHLPSPTEASLATLQPAPVGNTMGSSIIDMHAKMMSVTEVADSGDFVPLMSVKDELSESEQQQSSDDTSDSAPEQAVGRGSPKAWSPQDMDSALDALRTHNMTLTKASATFGIPSTTLWQRAHRLGIDTPKKDGASKSWSEDDLKAALDALRAGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLARALAAVRAGAAVQRAASHYGIPTGTLYGRCKREGIELSRSNPTPWSEGAMEEALEAVRVGQMSINQAAIYFNLPYSSLYGRFKRCKIQPPQGIQPSSHMEFSEQMDHQFSPDMISGLDDIHRTYTLADVLDVQSRTQESNDEYTVQPRTKAEHSVSYVQSRSPDSSKRQVYQEVQKNTELQSAHAPVQSRPQAELGPYVQTRTLESMDMRPDVQEFQSEGRLQTAPVHSRPQVHSLVNSYVQSRTLESLDERQDLQRELKSSEGRLQTAPLQSRPQVHSLVNSYVQSRTLESLDKRQDLQREFQSSEGRLQTAPLQSRPQVHSLVQSRTIQSIDKRHDEQVQSGAEVRAFSGVRQALYALEPCGPAYCVAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01248008;
- 90% Identity
- -
- 80% Identity
- -