Pfla025109.1
Basic Information
- Insect
- Polymixis flavicincta
- Gene Symbol
- -
- Assembly
- GCA_949987655.1
- Location
- OX465186.1:17158956-17159312[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-09 3.6e-06 28.0 0.0 3 38 17 52 15 57 0.92
Sequence Information
- Coding Sequence
- ATGGTTCGCCGCTACCAAAGGAAGACAGAACGTGCCAAATGGAGCTTGGAGGAGATGGAAGCAGCAGTAAGGGATGTGCCAAGCAGAAGGTTAAGCTGTAAACGGGCCGCTCTTGAGTACAATATGCCACGATCAACTTTGCAACGAAAACTAGAAGaatacaaaaaacaatatttatcacCAAGAAAACTAGGTAGCTTTAGACCGGTATTCACAACGGCTCAAGAAGAAGAGTTAGCTTCATATATTAAAGACATGGAAGGTAGATTGTTTGATTTGTGTCCAAAAGAAGTTCGTCAGCGGGCCTATCAATTGGCCAGCTATGTGCAACTCCACCACCTGAAAAATCTTTTTTAG
- Protein Sequence
- MVRRYQRKTERAKWSLEEMEAAVRDVPSRRLSCKRAALEYNMPRSTLQRKLEEYKKQYLSPRKLGSFRPVFTTAQEEELASYIKDMEGRLFDLCPKEVRQRAYQLASYVQLHHLKNLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00831101; iTF_01264334; iTF_01085073; iTF_01085074; iTF_00038648; iTF_01027226; iTF_00831102;
- 90% Identity
- -
- 80% Identity
- -