Pcas009414.1
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- Bgb
- Assembly
- GCA_038024825.1
- Location
- CP149050.1:6698540-6709705[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-14 1.9e-09 37.8 0.1 1 27 33 59 33 69 0.92 2 2 2e-63 4.7e-59 199.2 0.8 24 165 241 375 236 377 0.95
Sequence Information
- Coding Sequence
- ATGCACGCCATGAGCGATCCATCAGCCCTGGCTGGCATGTTACCCTTTGACTCCATCGGACTGTACGAACAGCCTAAGCCGCGTTTTATTTTCAAGATGCCTCGAGTAGTTCCAGATCAAAAAGCCAAATTCGAATCGGATGATCTCTTCAAAAGACTGAGCCGGGAGAGCGAGCAAGAAGCTACGCCCTGCGATCGCCAACCCGCCTGCCCAGCGTGGCGATTATGGGCTTTTACCTCCATGAAGGCACACCAAAGACCACGGCCCCTAGTTCCCGGCGGTCCCGCTATTCCTGGTCACGGTGGCGACCATGGTAACGGTGGGACGGGGGGTGCGAAGAATCTCCGGGCTACGGGAGGCCATCACACCAAACTGACCCTGGCGACGTACAACGGACGCACGCTACGGCTCGACTCGCATCTGGCGCAACTGGAGGTGGAACTTGAGAAGATTAGGTGGCACGTATTAGGGTTATGTGAAGTCCGAAGAGAGGGTGAGGACACCATATCTCTCGAATCAGGCCACCTAATGTACTTCCGAGAGGGAGACCAACAATCTCAAGGTGGCGTTGGGTTTCTGGTCAATAAGTCCCTGGCTGACAATGTTGTCGAAGTGTCCAGTGTGTCGAATCGGGTAGCGTACCTCATCATCAAGCTCACCGAGAGGTACAGCCTCAAGGTGGTGCAAGTGTACGCACCGACCTCGACACACTCGGATGATGAGGTGGAGGTGAGGTACACCGGGTACCGCGACCGTCCGCCAGAAGAGCGGCAGATGCGATTCACCAGTGGCTGCCGCGAGGGCCACACGGAGATCGCCTTCACCGCCACCGGCACCAACCTCCAGCTTGTGTTCGACCACTCGCCGTACAACAACCGCGGATGCGACTTCCAGAAAGAAAATGGCAagGCCCACATAGTGTCCAGATTCATAATGAACGGCGTGTGCGTCCGATGGCGGGGTTGGATCGACTTGGACCGTTTGGACGGGGCGGGTTGTTTGGAGTTGGACGAAGAGAGAGCCGCTATTGAGGATGCGGCTTTGAGGGATCAGATCGAGAGGTATAATCAGCGGTTGAGGGATTTCGAGGATAAGCAGCGGGCTTACAGGGAGCACGGCGAGGAGATGCGCGCCCACTCTCACGCGCACGTGCAGCGCTGCCATCAGGCGCGCCAGCCGCCGCACGGCGCGCACCCGGCCCATCCACATCCGCACCCGCCGCACCCCGTCCACATGAAATCGCAAGGAGCTCTCATTTCATAA
- Protein Sequence
- MHAMSDPSALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEQEATPCDRQPACPAWRLWAFTSMKAHQRPRPLVPGGPAIPGHGGDHGNGGTGGAKNLRATGGHHTKLTLATYNGRTLRLDSHLAQLEVELEKIRWHVLGLCEVRREGEDTISLESGHLMYFREGDQQSQGGVGFLVNKSLADNVVEVSSVSNRVAYLIIKLTERYSLKVVQVYAPTSTHSDDEVEVRYTGYRDRPPEERQMRFTSGCREGHTEIAFTATGTNLQLVFDHSPYNNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLDRLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEEMRAHSHAHVQRCHQARQPPHGAHPAHPHPHPPHPVHMKSQGALIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -