Basic Information

Insect: Polyergus mexicanus
Gene Symbol: Snapc4
Assembly: GCA_030449975.1
Location: JAUDSZ010000017.1:730734-733466[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.2 3.2e+03 -0.3 0.0 3 17 162 176 160 178 0.89

2 6 1.1 2.7e+03 -0.1 0.0 12 46 214 253 212 253 0.70

3 6 2.6e-11 6.8e-08 33.8 0.5 1 45 259 305 259 306 0.95

4 6 4.1e-10 1e-06 30.0 0.5 3 43 314 358 313 360 0.97

5 6 3e-08 7.8e-05 24.0 0.0 1 45 367 412 367 413 0.92

6 6 2.4e-13 6.1e-10 40.4 0.2 4 43 421 460 419 462 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.2	3.2e+03	-0.3	0.0	3	17	162	176	160	178	0.89
2	6	1.1	2.7e+03	-0.1	0.0	12	46	214	253	212	253	0.70
3	6	2.6e-11	6.8e-08	33.8	0.5	1	45	259	305	259	306	0.95
4	6	4.1e-10	1e-06	30.0	0.5	3	43	314	358	313	360	0.97
5	6	3e-08	7.8e-05	24.0	0.0	1	45	367	412	367	413	0.92
6	6	2.4e-13	6.1e-10	40.4	0.2	4	43	421	460	419	462	0.98

Sequence Information

Coding Sequence: ATGAGCGAATCCGACGATTCTGACATTCAAGCTGATATTCAAGCTCTAACCGAAGCTTTGTCTTTACCTACAACCAGTGACCCACAACAACAGTTTATTTCTAGTAATTCGCGATCCGATAGCACTCCCTCGATAGATATTGATGGGAGCGACGATGAATGTTTTAACTATATCTATGAAAATCAGGACATTGAGTCTCTGAACGTTTACGAGatgaatgaaaaattgatCACGGGCCTGATGATAGccaagaaaaaattgattgttTTGTTACAAGAGTGTGAGAGGAAGATAAAGGAAGTGGAAGAAAAAATGAGTTCCAGTGAAAGATCAAGTTTACGTATTCCTAGTAGAATTGCAATCACTAATGCTGGCATGCCATATTTTAAGGATAAGAATCATTTTAGAGCACCCAAGAACTGTGACATGAAGCTCAAGGAACAACGCGGTGAGTTATTTCTGTCATCTCTTAGAAAACCGAGTCGTTGGACGGGAAGAGATAGGGAAATACTTTTAAAAGCCATAGAAAATGAGGCTATTGAATCGGTACTGTCTAAAGGATTTGATGATGATAAACAGTCTGATGAAGAGATATTGAACAATCAAGCTAAAAATATGGCATTACCACTGCctagaaattttaaagaaatggtGGGAGCGGTCGGCGAGAGAGAGTTTGATTGGCATAAAATTTCCAGAATAGATTTCGACGATAAGCATTCACCGGGTGAATGCCAAGCCATGTGGAATGTCTATTTGCATCCCGACTTCAACAAGAGCGAGTGGACAAATGCAGAGGATAAGAAACTATTGCAATATAccaaagaatataaatatcaagatTGGGATACTATTACACAGTTGTTAAAAACAAATCGTAGTGCTTATCAATGTTTCATCAGGTATAATACCATTAAGAAGATGCCATCCTCGGGACATGCTTGGACTAAGGTGGAAGATAAATGTCTCGCGAATATCATAAACCAACTCCAGATTGGAGATTACATTCCTTGGTCCGAAATTGCTAATCATATGCGGCATAGAACCAAGCAGCAGGTTTACACACGGTGGATGTACAGGACAGCGCCGCATTTAAGGAAAGGCAGGTTTACTTATTTGGAAACAAAAACTCTTATGGAAGCGGTAGAAAAATATGGCATGGACTTCTGTAAAATCTCAAATATGGTGATGCCATATCGAACTTCTACACAACTCAATGAACGCTATCATACAGTAATGAAAAACATGAACGATAAAATATGGACAATCGACGATGATGAGAAACTGCTTCAActacacaaaaattataataatgattggTCCAAGATAGCCATGTATTTTTCCAACAAATCAAGAACACAAGTGAGACAACGATTTAACGCGATACAAAATTacacaaagaaaaatatctctcTTCAAGATATTCCTAGACAATCTAGAAATGGTAAACAGGTTTTAATGTATAAGCAATTATCTAAGAATACATTGAAACAATGTAATAAAACCACGATTGATGATATTCAGCTAAGATTGTATGAAATTCTTAGTTTACCTCCTTTAGAAGTTATCAATTCTCAAAAATCTTACGATTCAAAACAGCTCGCATACGATACTAGAagattttatgatatattaaacttattaaaCGTCAATGTTGATCTTTCAAATAGTTTTGTAAATTTTGTGCATCTAAATAAAAGGGAAAAACTACTTTTGGCTTCTCTAAAAGAATACATAAATGTAAGAAATAATGGAATACAAAATCATGAGCGAATAGAAAAGTTCAGAATGCAAATGTTTGGTCGTATCGAAAAAGTTAGCGAATGTTCTTTCATACCGCCACTACCGTTTGATGGATACATAAGAACAAAgaagataaagagaaaagatcAATCAATAGATTGCGAGCTAAATGtcaatgaaaaatttcttatcGATGTGCCTACagaattctctacaactttctATATAGATTTCATTAATCATGAGGAAGAAAttcaattttacaaatttagtCAATTATTACTAAGTGATTATTACGAATGCGATGAGcgacatataaatttatacaaattattagaATGTAATCTCTCTTTTGATAAAGCGAGCACTTCACCAGAATATCATAATAGTACGGATGTGGATTTGAAGTTAACAAACTACAAGCAAAGAAAATGctcgaataaattgcaaacACCTATAAGCACTGAATATATTAACGATGAATATGAAGAAAAGCTATTCACTATGTCGAATATAATTATGCCGAATCGAGCAACTTTATTAGGTTTCAAGAATTTGCTTCTTTGGAAATTGTTGTAtgaatgtcaaaataaatctGAGCATtgcgaattattatttaaaagtgAACAACAAGAAACGGAACGAACAACAACAAACTGTCCTATACAAACGGAAAGCGTCGAATATCAATTGCTGCAAATTCGTTTGCTGCAATTATTTAAACTTCCTATAGGTTTATCAAACTCCATATTGGAACTATCTGGACCAGCACctatatttttgacaaaaatagATGAGAATCAGAAAACCGTttcgaaaaagagaaaatgtgaAGATATGAATTCTGGAGAATTGAATGAAGAAACAAATAACTATAACATTCTTGCCAATAGCAGCTCTAAGTTTGACTCCAATATTGAAACTGCGGATCTTCCCATAGTACGTAATTGCAAAGTagtttgcaaaaaatataaaataatcgcaaaataa
Protein Sequence: MSESDDSDIQADIQALTEALSLPTTSDPQQQFISSNSRSDSTPSIDIDGSDDECFNYIYENQDIESLNVYEMNEKLITGLMIAKKKLIVLLQECERKIKEVEEKMSSSERSSLRIPSRIAITNAGMPYFKDKNHFRAPKNCDMKLKEQRGELFLSSLRKPSRWTGRDREILLKAIENEAIESVLSKGFDDDKQSDEEILNNQAKNMALPLPRNFKEMVGAVGEREFDWHKISRIDFDDKHSPGECQAMWNVYLHPDFNKSEWTNAEDKKLLQYTKEYKYQDWDTITQLLKTNRSAYQCFIRYNTIKKMPSSGHAWTKVEDKCLANIINQLQIGDYIPWSEIANHMRHRTKQQVYTRWMYRTAPHLRKGRFTYLETKTLMEAVEKYGMDFCKISNMVMPYRTSTQLNERYHTVMKNMNDKIWTIDDDEKLLQLHKNYNNDWSKIAMYFSNKSRTQVRQRFNAIQNYTKKNISLQDIPRQSRNGKQVLMYKQLSKNTLKQCNKTTIDDIQLRLYEILSLPPLEVINSQKSYDSKQLAYDTRRFYDILNLLNVNVDLSNSFVNFVHLNKREKLLLASLKEYINVRNNGIQNHERIEKFRMQMFGRIEKVSECSFIPPLPFDGYIRTKKIKRKDQSIDCELNVNEKFLIDVPTEFSTTFYIDFINHEEEIQFYKFSQLLLSDYYECDERHINLYKLLECNLSFDKASTSPEYHNSTDVDLKLTNYKQRKCSNKLQTPISTEYINDEYEEKLFTMSNIIMPNRATLLGFKNLLLWKLLYECQNKSEHCELLFKSEQQETERTTTNCPIQTESVEYQLLQIRLLQLFKLPIGLSNSILELSGPAPIFLTKIDENQKTVSKKRKCEDMNSGELNEETNNYNILANSSSKFDSNIETADLPIVRNCKVVCKKYKIIAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00279888;
90% Identity: iTF_00730660; iTF_00729223; iTF_00729982;
80% Identity: -