Basic Information

Gene Symbol
-
Assembly
GCA_004195275.1
Location
SGAY01009332.1:172-2895[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.1 2.1e+03 -0.3 0.0 3 17 160 174 158 176 0.89
2 6 0.4 7.6e+02 1.1 0.0 20 46 226 254 219 254 0.80
3 6 1.2e-11 2.4e-08 34.7 0.3 1 45 260 306 260 307 0.95
4 6 8e-11 1.5e-07 32.1 1.2 3 44 315 360 314 362 0.96
5 6 5.2e-08 9.8e-05 23.1 0.0 1 45 368 413 368 414 0.94
6 6 7.8e-13 1.5e-09 38.6 0.2 4 43 423 462 421 465 0.97

Sequence Information

Coding Sequence
ATGAGCGACGATTCTGACATTGAAGCTGATATTCAAGCTCTGACTGAAGCTTTGGCCTTGCCTACAAACAGCGATTCACAACAACAGTTTGTTTCTAGTAATTCTCGACCTAGTAGCActctttcgataaattttgatgGCAGCGACGATGAATGTTTTAACTATATCTATGCAAATCAGGACAATGAGTCTCTGAACGCTTACgagatgaatgaaaaattgatcacAGGCCTGATGATggctaagaaaaaattgatcgtTTTGCTACAAGAGTGTGAAGGGAAGATAAAGGAAGTGGAAGAAAAAATGAGTTCCAGTGAAAAGACAAGTTTACGTACTCCTAATAGAATTGCAGTTACCAACGCTGGCATGCCATATTTTAaggataaaaatcattttagagCACCTAAGAACAGCGACATGATATTAAAAGAACAACGTGGTGAGTTATTTCTGCCCTCTCTTAAAAAGCCGAGTCGTTGGACCGGAAGGGACCGAGAAATACTTTTAAAGGCCATAGAAAACGAGGCTATTGAATCGATACTGTCTAAAGGATTTACTGATGAAATTGATGATAAACAATCTGATGAGGAGACATTGAACAATCAAACTAAAAAGATTGCATTACCACTGCCTAGAAATTTTAAGGAAATGGTAGGGGCGATTGACGAGAGAGGGTTTGATTGGCACAAAATTTCTAGAACAGATTTCGAAGATAAGCATTCACCGAGTGAATGTCAAGCCATGTGGAATGTCTATTTGCATCCCGACTTCAACAAGAGCGAGTGGACAAATGCAGAGGATAAGAAACTGTTGCAGTATGCCAAAGAATGTAAATATCAGGATTGGGACACAATTACACAGTTATTAGGAACAAGTCGTAGTGCTTATCAATGTTTCATTAGATATAATACTATTAAGAAGATGCCATCCTTGGGACATGCTTGGACTAAGGAGGAAGATAAATGTCTTGAGAATATCATAAGCGAACTCAAAATTGGAGATTATATTCCTTGGTCTGAAGTTGCTAATCATATGCGGCATAGAACCAAACAGCAGATTTACACACGGTGGATGTATAGGAAAGCGCCGCACTTAAAGAAAGGCAGGTTTACTTATGCGGAAACAAAAACTCTCATGGAAGCAGTAGAAAAATATGGCATGGACTTTTGTAAGATCTCAAACGTCGTGATGCCATATCGAACTTCTATACAACTCAACGAACGCTATCGTACAATAATGGAAAACGTAAACAACGATAAAATATGGACAATCGATGATGACGAAAGATTGCTTcaattacacaaaaattataataatgattggtCCAAGATAGCCATGTTTTTTTCCAACAAATCAAGAACACAAGTGAGACAACGATTCAACGCGctacaaaaatacataaagaaagatatttctctTCAAGATATACCTAGACCTAAAAACGATAAACAGATTTCaacatataaagaattatctaatcatatattagaacaatgtaataaaatcgcATCGATTGAAAAACATATTGTAAACATTGATGATATTCAGCTAAGATTGTATGAAATTCTTAGTTTACCTCCTTTAGAAACTATCAATTCTCAACAAGCTTACGATTCAGAACAGCTCGTGTATGATACTAGAAGATTGTATGATACATTGAACCTATTGAACGTCAATCTTGATTTGtcaagtaattttataaattttatgcatctAAATAAAAGGGAGAAACAACTTTTGGCTTCTCtaaaagaatatgtaaatataagaaataatggaATACAAAATCATGAGCGAATAGAAAAGTTCAGAATGCAAATGTTTGGTCCTGTCGAAAAAGTTAgcgaaaattcttttataccaCCACTACCGTTTGATGGATACATAAGAACAAAGaaggtaaaaagaaaagatcagTCTATAGATTGTGAGCTAgatatcaatgaaaaatttcttatcgatGTGCCTACAGAATTCTCTATAACTttctatatagattttattaatcatgaggaagaaattcaattttacaaatttagtCAATTGTTATTAAACGATTGTTATAAATGTGCTGAacgacatataaatttatacaaattattagaatGTAATCTCTCTTTTGATAAAACGAGCATTTTACCAGAATACCATAATAGTACAGATGTGGATTCGAAGTTGACAAACTACAAGCAAAGAAAATGCTCGAATAAATTGCAAACACTTATTAATATGGAATATATGAATGATGAAGATGAAGAAAAGCTATTCATTACGCCGAAAATAATTACACCGAATCGAGCAACTTTATTAGGTCTCAAGAATTTGCTTCTTTGGAAGTTATTGTAtgaatgtcaaaataaatctgaaCATTGCGCATTAGTGTTCAAAAGTGAGCAACAAGAAACCAAACAAACAACAAATTGTCCTATACAAACAGAAAGCACCGAATATAAATTGCTGCAAATTCGCCTGctgcaattatttaaacttcCCATAGGTTTATCAAACTCCATATTGGAACTATCTGGACCAGCAcctatatttttgacaaaaaaggAAATGAATCAAAAAACCGtttcgaaaaagagaaaatttgaagATATCTCTGTAGAATTGAGCAAAGAAACAGaccactttaatatttttgccaaTAGCAATTCTAAATTTGACTCCAATGTTGGAACTACAGATCTTTCCATAGTACGTGATTGcaatttgtaa
Protein Sequence
MSDDSDIEADIQALTEALALPTNSDSQQQFVSSNSRPSSTLSINFDGSDDECFNYIYANQDNESLNAYEMNEKLITGLMMAKKKLIVLLQECEGKIKEVEEKMSSSEKTSLRTPNRIAVTNAGMPYFKDKNHFRAPKNSDMILKEQRGELFLPSLKKPSRWTGRDREILLKAIENEAIESILSKGFTDEIDDKQSDEETLNNQTKKIALPLPRNFKEMVGAIDERGFDWHKISRTDFEDKHSPSECQAMWNVYLHPDFNKSEWTNAEDKKLLQYAKECKYQDWDTITQLLGTSRSAYQCFIRYNTIKKMPSLGHAWTKEEDKCLENIISELKIGDYIPWSEVANHMRHRTKQQIYTRWMYRKAPHLKKGRFTYAETKTLMEAVEKYGMDFCKISNVVMPYRTSIQLNERYRTIMENVNNDKIWTIDDDERLLQLHKNYNNDWSKIAMFFSNKSRTQVRQRFNALQKYIKKDISLQDIPRPKNDKQISTYKELSNHILEQCNKIASIEKHIVNIDDIQLRLYEILSLPPLETINSQQAYDSEQLVYDTRRLYDTLNLLNVNLDLSSNFINFMHLNKREKQLLASLKEYVNIRNNGIQNHERIEKFRMQMFGPVEKVSENSFIPPLPFDGYIRTKKVKRKDQSIDCELDINEKFLIDVPTEFSITFYIDFINHEEEIQFYKFSQLLLNDCYKCAERHINLYKLLECNLSFDKTSILPEYHNSTDVDSKLTNYKQRKCSNKLQTLINMEYMNDEDEEKLFITPKIITPNRATLLGLKNLLLWKLLYECQNKSEHCALVFKSEQQETKQTTNCPIQTESTEYKLLQIRLLQLFKLPIGLSNSILELSGPAPIFLTKKEMNQKTVSKKRKFEDISVELSKETDHFNIFANSNSKFDSNVGTTDLSIVRDCNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-