Pter084350.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- stc
- Assembly
- GCA_963920685.1
- Location
- OY987331.1:14058067-14061162[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 1.5e+05 -4.1 1.6 15 19 344 348 343 348 0.81 2 13 3.7e-06 0.29 14.2 13.1 4 19 392 407 390 407 0.93 3 13 4.8e-08 0.0038 20.2 11.0 1 19 443 461 443 461 0.97 4 13 2 1.6e+05 -4.9 1.6 9 13 467 471 466 472 0.69 5 13 1.3e-08 0.00098 22.1 15.6 1 18 501 518 501 519 0.97 6 13 3.7e-06 0.29 14.2 12.9 1 19 559 581 559 581 0.86 7 13 1.3 1e+05 -3.5 2.0 5 10 610 615 610 615 0.93 8 13 0.018 1.4e+03 2.5 12.4 1 11 621 631 621 643 0.90 9 13 7.3e-10 5.7e-05 26.1 12.1 1 18 648 665 648 666 0.98 10 13 0.36 2.8e+04 -1.7 0.9 5 10 694 699 692 699 0.95 11 13 0.012 9.7e+02 2.9 15.2 1 18 705 721 705 722 0.87 12 13 3.7e-07 0.029 17.4 17.3 1 19 758 777 758 780 0.96 13 13 0.001 81 6.4 14.7 1 18 787 805 787 806 0.93
Sequence Information
- Coding Sequence
- ATGTCCAATTCATTAAAAAGTAATGAACAATTTTCATTGAATGGTGTTCAATCCGCAACTACACGCGAAGTGGAATCAGgtgataatagtaataatagaGTATTTAGTTCCTATTCAAATTTACAAGCTACTGCACCAGAATATTATCCTCTAAACACAACTCAGGGAGCAGTAAGAAAGAAACCTCCAAGACAAAATCAAGAGGTTCGAAACACAAATGCCTACAGACCCAAGATAGATAAAAATAGTAGACCCTCAGACCTGAGACCAACAGCCCAAGAATTTTACCCGGGGAATTCCAATGGTGCTGGAAAAAGATATCAAGAAAAAAAACATCATTGGAAGGACAGAAATTCCAGATATAACACAAACTGGCGGTCTGAAAGTAATGAATATTCAAATGATTATGATGCTGGTCAAGAGTCAAATAATTTGGAGAAGCCTAACAATGCAAGATATGCCGGAAATTATGGAGGATACGGCTACAAAGGGTTTAATAGCAACTCCAACCATTATGGAAGATATGAAAGGAATGAGGAAACCTATAGAAATAACAAAGCAGTCAATGTTTCACCCTCACATTCTAAATTTGAGAGAAATTCAAATGAAAATAGTACTTATGATTATAGAAATAAATTCTATTTTGAGCGTAAAAATGGGTATGTAGCCAAGCCATTCAGTAGAACTAAACAATCTGAAAGAGGTTACTCTGATTTTAATGAAAATGGTTATTCTGAGAGATTTTCAAGTAATAGTAACAGGCATACAGAACATCATAATAATATGGAGGACAGAAGAAGAGATAAAGTTAAGTCGTATCCTAATGATGCAATTAAAAATGGTTCCACTGCAGGGCAACGAGAAAGACTGATTGAAATGATCAACAACCGTGTATTAGAATGTATGGtatgctgtgaaaaaattaaaaggtCTGATAGGACGTGGTCATGTTTTCAGTGCTACCATATTATTCATATTAGCTGTATCACTGCATGGGCCCAATCATCAAAGATTGAAGAAAGTTGGAGATGTCCAGCATGTCAAAATATATATACAGAAGTTCCAAGTCAATATACTTGCTATTGTGGAAAAATGAATGATCCAAAACTTATCCCGACTATCATTGCTCATGGATGCGACAATATGTGTTTAAGAAAAGGAAAAAATTGTGATCACAACTGCAACATATTATGTCATCCAGGCCCATGTCCAGAATGCAGTATTATGGTTTCAAAACCATGCGGATGTGGACTGACAGAACAAGTTGTAAAATGTAGCAGTGATGTTAAAATAACTTGCAGTTCTAAttgcaataaaatattaaactgtGGAATCCACACATGTGTAGAGAAGTGTCATCAAGGCCTCTGTTCTTCCTGTACAGCTGTAATAATCCAAGAATGCCACTGTGGAAAGACTGGTAGAAAAGTTCAATGTGATGCAGAACACAGTGGTAAATTAACATTTATATGTGAAAATACCTGTGATAAATTGTTACCATGTGGCAATCACAACTGTCAAAAGCAATGTCACCCTGGACCTTGTTTCCCATGTGAAAGAGATGTTACCATAATTAAAAGTTGCTTTTGTGGCAAAACCCCATTAGATACAATCAGAACTTCTTGTCTTGATCCAATCCCATGTTGTGACAACAAATGTGGTAAACTTTTAATTTGTGGACCACCTAGCATGTCCCATGCTTGTAAAGAAAAATGCCATGAAGGCAAGTGTCCACTGTGCCCTTTAACAACTATAATTCGTTGTAGATGTGGACATATGGATAAAGAGATGGCTTGTCAAAAGGTAACTACTAAAGCAGATGATGCCAGATGTGAAAAAAAGTGCACTAAGAAACGCCTTTGTGGTAAGCATACCTGCAAACAGCGTTGTTGTATTGAAATTGAACATATATGTCCATTACCTTGTAATCATTTACTTTCCTGTGGCCTCCATAAATGTGAACTTACCTGTCATTCTGGTCGATGCCCACCTTGTATGGAAACTAGTTTTGAAGAACTATATTGTGAATGTGGTGCAAGCGTTCTATATCCACCAGTTCCTTGCGGAACAAAACGTCCTACCTGCAAAAAACTTTGCTCAAAACCTCGCCCCTGTGGTCATCCACCAAATCACGAATGTCATCCTGGACCATGTCCATCTTGTTTTGTATTAACTAAACAGTGGTGCTATGGTAATCATGAGCAACGAGCAGCAATTCCCTGTCATCAAAATAAATTTAGTTGTGGTTTACCATGTGGCCAACCAATGCCTTGTGGTCGCCATGCATGCATCAAACCGTGCCATGAAGGTAGATGTCCAGTACCATGTACTCAGCCTTGCACTATGCCTAGAGTGCTATGTGGTCATCCATGTAATAAGCCTTGTCACAATTCGCCTTGTCCAGACAGTACTTGTAAGCAGATGGTACCTATCACTTGTCTATGTGGACTACAAAAAAGCAGCAAAATATGCATGGACTTGACTGAAGAATTTCGAAACATTGAAATGGGCCAGCTTAAAGACAAATTGGGAAATTTATCATTTAATACTGATGTTACTGATATCACAGTTAAAAAGCCATCTGTTTTAAAAATACTGGAATGTACTGAAGAATGTAAAGTTTTAGAAAGAAACAGAAGGCTTGCTATAGGACTGCAAATTCAAAATCCTGATTTGAGTCAAAAATTAACACCAAGGTATTCAGATTTTTTGAAGCAATGGGGTAAAAAGGATCCGAAATTTTGCCAAAGAATTCATGATAAACTGAGTGAACTGGTGCAGCTGGCGAAGCAAAGTAAGCAAAAAAGTCGTTCCTATTCATTTGAATCGATGAACCGTGATAAGCGCACTTTTATTCAtgaatattgtgattattttgggATCGAGAGTGCAGCCTATGATGCAGAGCCAAACCGAAATGTTGTTGCCACCGCTATTAGAGACAAATCGTGGTTACCCAGCATGAGCTTGTTAGAGGTACTCCAAAGAGAAAATGGTCAGCGAAAGGTGCCAGGTCCAATTTTAGGGTACAGTGCCACTGGTGAATCCGAAACGGTTTCTTTGAAAGTACTCACAAGTGCCAAAAAATACGAGTGA
- Protein Sequence
- MSNSLKSNEQFSLNGVQSATTREVESGDNSNNRVFSSYSNLQATAPEYYPLNTTQGAVRKKPPRQNQEVRNTNAYRPKIDKNSRPSDLRPTAQEFYPGNSNGAGKRYQEKKHHWKDRNSRYNTNWRSESNEYSNDYDAGQESNNLEKPNNARYAGNYGGYGYKGFNSNSNHYGRYERNEETYRNNKAVNVSPSHSKFERNSNENSTYDYRNKFYFERKNGYVAKPFSRTKQSERGYSDFNENGYSERFSSNSNRHTEHHNNMEDRRRDKVKSYPNDAIKNGSTAGQRERLIEMINNRVLECMVCCEKIKRSDRTWSCFQCYHIIHISCITAWAQSSKIEESWRCPACQNIYTEVPSQYTCYCGKMNDPKLIPTIIAHGCDNMCLRKGKNCDHNCNILCHPGPCPECSIMVSKPCGCGLTEQVVKCSSDVKITCSSNCNKILNCGIHTCVEKCHQGLCSSCTAVIIQECHCGKTGRKVQCDAEHSGKLTFICENTCDKLLPCGNHNCQKQCHPGPCFPCERDVTIIKSCFCGKTPLDTIRTSCLDPIPCCDNKCGKLLICGPPSMSHACKEKCHEGKCPLCPLTTIIRCRCGHMDKEMACQKVTTKADDARCEKKCTKKRLCGKHTCKQRCCIEIEHICPLPCNHLLSCGLHKCELTCHSGRCPPCMETSFEELYCECGASVLYPPVPCGTKRPTCKKLCSKPRPCGHPPNHECHPGPCPSCFVLTKQWCYGNHEQRAAIPCHQNKFSCGLPCGQPMPCGRHACIKPCHEGRCPVPCTQPCTMPRVLCGHPCNKPCHNSPCPDSTCKQMVPITCLCGLQKSSKICMDLTEEFRNIEMGQLKDKLGNLSFNTDVTDITVKKPSVLKILECTEECKVLERNRRLAIGLQIQNPDLSQKLTPRYSDFLKQWGKKDPKFCQRIHDKLSELVQLAKQSKQKSRSYSFESMNRDKRTFIHEYCDYFGIESAAYDAEPNRNVVATAIRDKSWLPSMSLLEVLQRENGQRKVPGPILGYSATGESETVSLKVLTSAKKYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01239805;
- 90% Identity
- -
- 80% Identity
- -