Pcer015718.1
Basic Information
- Insect
- Polydrusus cervinus
- Gene Symbol
- stc
- Assembly
- GCA_935413225.1
- Location
- CAKXYS010000319.1:24117-27173[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.95 4.3e+04 -4.0 1.6 15 19 329 333 328 333 0.81 2 12 1.6e-06 0.073 14.4 14.1 3 18 376 391 375 392 0.93 3 12 4.6e-09 0.00021 22.5 13.3 1 18 428 445 428 446 0.97 4 12 3e-09 0.00014 23.1 14.1 1 18 486 503 486 504 0.98 5 12 1.3e-05 0.61 11.5 15.8 4 19 551 566 544 566 0.89 6 12 0.63 2.9e+04 -3.5 2.0 5 10 595 600 595 600 0.93 7 12 0.015 7e+02 1.7 12.2 1 11 606 616 606 628 0.90 8 12 3.6e-10 1.6e-05 26.1 12.1 1 18 633 650 633 651 0.98 9 12 0.18 8e+03 -1.7 0.9 5 10 679 684 677 684 0.95 10 12 0.0029 1.3e+02 4.0 16.5 1 18 690 706 690 707 0.87 11 12 6.3e-08 0.0029 18.9 17.6 1 19 743 762 743 765 0.96 12 12 0.00051 23 6.4 14.7 1 18 772 790 772 791 0.93
Sequence Information
- Coding Sequence
- ATGTCCGGTTCTTTAAAAAGTGATGACATTTCAATTCAAGAAGTTCGGTCTACAACATTTACTCGTGAGGTAGAATCAAGTGGAAGCCGTAGTTTAACTAGTGCCTATTCAAATTTGCAAGCTACAGCACCAGAATACTATCCTTTAAATCCCAACCAGGGTACTGTAAGAAAGAAGTCATTAAGGCAGAACCAGGAGTTTTATAACACAAATTCTGGCAAACCTAAAGCGGATAGAAGCAGTAGGCAGTCTGACTTAAGACCAACAGCCCAAGAATTCTACCCTGGGACTTCCAATGGCAGTGTAAAAGGAATTCAAGAGAGAAAACACTGGAAAGATAGGAATTCTCGTTACAACACAAACTGGCGATCTGCAAATAATGAATATGAGACAGGTCAGGAACCAACTAATTACAGGAGGCCCAATAATACCAGATATTCTGCCAACCATGCAGGATACAACTATAAAGGATTTAATAGTAACTCCAGCCAATATGGAAGGTATGAGAGGAATGAGGAAACATATGGAAATAAAGCAACTGATGGTTCACCTTCACATTCCAGATTTGAAAGAAATTCTTACGATAATACTAATAAtgattatagaaataaattccAATTCGAACGTAGAAGTGGGTATGTGAATAAATCATACAATAGGCCTAAACATGAAAAAAGTTACCCtgattttaatgaaaatgcTTTTTCTGGTGGTAGTAGACGTACAGATTACTATAATACTGAAgacaagaaaaaagaaaaatttgaaacataTTCTAATGTGCCAATTAGACATGTTTCAACTGCAGGGCAACGTGAAAGACTGATAGAAATGATCAGTGGTCGAATGTTAGAGTGTATGGTATGCTGTGAGAAAATTAAAAAGACTGATAAAATTTGGTCCTGTTTTCAATGTTATcatataatacatattagtTGCATATCTGCATGGGCAGAATCATCAAAGGTTGAAGAAAATTGGCGATGCCCAGCCTGTCAAAATATCTATACAGAAGTTCCAAATCAATATACATGTTATTGTGGTAAAATTATTGATCCAAAACTTATTCCGAATATTATTGCCCATGGATGTGATAACAtgtgtttaaaaaaaggaaaaaattgtgAACACAAGTGCAATATATTATGCCATCCAGGCCCTTGTCCAGAATGCAATATTATGGTTTCAAAACCTTGTGGATGTGGATTGACTCAACAAGTGGTTAAATGTAGTAGTGATATTAAAATCACCTGTAATTCAAATTgcgaaaaaattttgaattgtggGGTGCACAAATGTTTAGAAAAGTGTCATGCTGGTCCATGTTCTCCATGTGAAGCTGTAATAATACAAGAATGTTATTGTGGAAAAACTGGTAGAAAAGTACATTGTGATGCAGAGCACTCCGGTCAATTGACTTTTATATGTGAAAATAACtgtaataaattattgtcaTGTGGTAATCACAAGTGTGAAAAACAGTGCCATGCTGGATCTTGTTCCCCTTGTGACACAGACATcgacaaaattaaaacttgtttttgtaGCAAAACTCTATTAGAAACAAAAAGAACTTCTTGTCTTGATCCAATTCCATGTTGTgataataaatgtaataaacCTTTAATTTGTGGACCTCCAAGTATGCCTCATGTTTGCAAAGAGAAATGTCATGGTGGTAAGTGTCCACCCTGTCCTTTAACAACTGTAATTCGTTGCCGATGTGGACATATGGACAAAGAAATGGCTTGTCAAAAGTTAACTACTAAAGCAGATGATGCAAGATGTGAAAAAAAGTGCACCAAGAAGCGTCTTTGTGGTAAACATTCTTGTaagcaaaaatgttgtattgaaATTGAACATATTTGTCCATTACCTTGCAATCATCTACTTTCCTGTGGACTCCATAAGTGTGAACTTACCTGCCACTCTGGTCGATGCCCTCCTTGTATGGAAACCAGTTTTGAAGAATTATATTGCGAATGTGGTGCAAGTGTTCTGTACCCACCAGTTCCTTGTGGAACAAAACGTCCTACATGTAAAAAACTTTGCTCAAAGTCTCGTTCCTGTGGTCATCCACCAAATCATGAATGTCATCCAGGACCATGTCCACCTTGTTTTGTATTAACTAAACAATGGTGTTATGGTCATCACGAGCAGCGTGCAGCCATTCCTTGTCATCAAAATAGTTTTAGTTGTGGTTTACCCTGTGGACAGCCAATGTCTTGTGGGCGCCACACATGCAGCAAATCATGCCACGAAGGTAGATGTCCCGTCCCATGTACACAGCCTTGCACTATTCCTAGAGTACTATGTGGTCATCCGTGTAATAAGCCCTGTCACAACTCTCCTTGTCCTGATAGTACTTGTAAGCATATAGTACCTGTTACATGTCCATGTGGTCTTCAGAAGAGCAGCAAAATATGTGTAGATTTGACTGAAGAGTTTAGGAACATCGAAATGGCTCAGCTTAAAGACAAACTGGGAAACTTATCATTTAACACAAGTGTTGATGTGACTGATGTAACAGTTAAGAAACCATCTGTATTAAAGATTTTGGAATGCACTGAAGAATGCAAAGTTTTAGAAAGAAATAGAAGATTGGCTATTGGTTTGCAAATTCAAAATCCCGATTTGAGTCAAAAATTAACTCCAAGATATTCAGATTTCTTAAAACAATGGGCTAAGAAAGATCCAAAATTTTGCCAGAGGATTCATGATAAACTAAGCGAGCTGGTACAGCTGGCAAAGCAAAGTAAGCAGAAAAGCCGTTCCCATTCATTTGAGTCTATGAACCGAGATAAGCGCACTTTTATCCATGAATATTGTGAGTATTTTGGAGTAGAAAGTGCAGCTTATGATGCAGAACCAAACAGAAACGTTGTTGCAACTGCTATGAGGGACAAGTCGTGGTTACCTAGTATGAGTTTGTTAGAAATACTCCAAAGAGAAAATGGACAAAGGAAGGTACCAGGTCCAATCTTGGGTTATAGTGCCTCTGGTGAATCAGAAACAGTTTCTCTAAAAGTACTCACAAGTGccaaaaaaaatgagtaa
- Protein Sequence
- MSGSLKSDDISIQEVRSTTFTREVESSGSRSLTSAYSNLQATAPEYYPLNPNQGTVRKKSLRQNQEFYNTNSGKPKADRSSRQSDLRPTAQEFYPGTSNGSVKGIQERKHWKDRNSRYNTNWRSANNEYETGQEPTNYRRPNNTRYSANHAGYNYKGFNSNSSQYGRYERNEETYGNKATDGSPSHSRFERNSYDNTNNDYRNKFQFERRSGYVNKSYNRPKHEKSYPDFNENAFSGGSRRTDYYNTEDKKKEKFETYSNVPIRHVSTAGQRERLIEMISGRMLECMVCCEKIKKTDKIWSCFQCYHIIHISCISAWAESSKVEENWRCPACQNIYTEVPNQYTCYCGKIIDPKLIPNIIAHGCDNMCLKKGKNCEHKCNILCHPGPCPECNIMVSKPCGCGLTQQVVKCSSDIKITCNSNCEKILNCGVHKCLEKCHAGPCSPCEAVIIQECYCGKTGRKVHCDAEHSGQLTFICENNCNKLLSCGNHKCEKQCHAGSCSPCDTDIDKIKTCFCSKTLLETKRTSCLDPIPCCDNKCNKPLICGPPSMPHVCKEKCHGGKCPPCPLTTVIRCRCGHMDKEMACQKLTTKADDARCEKKCTKKRLCGKHSCKQKCCIEIEHICPLPCNHLLSCGLHKCELTCHSGRCPPCMETSFEELYCECGASVLYPPVPCGTKRPTCKKLCSKSRSCGHPPNHECHPGPCPPCFVLTKQWCYGHHEQRAAIPCHQNSFSCGLPCGQPMSCGRHTCSKSCHEGRCPVPCTQPCTIPRVLCGHPCNKPCHNSPCPDSTCKHIVPVTCPCGLQKSSKICVDLTEEFRNIEMAQLKDKLGNLSFNTSVDVTDVTVKKPSVLKILECTEECKVLERNRRLAIGLQIQNPDLSQKLTPRYSDFLKQWAKKDPKFCQRIHDKLSELVQLAKQSKQKSRSHSFESMNRDKRTFIHEYCEYFGVESAAYDAEPNRNVVATAMRDKSWLPSMSLLEILQRENGQRKVPGPILGYSASGESETVSLKVLTSAKKNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01244906; iTF_00197055; iTF_01241519;
- 90% Identity
- iTF_01241519;
- 80% Identity
- -