Pter084460.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- tfip11
- Assembly
- GCA_963920685.1
- Location
- OY987331.1:15550397-15560049[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-95 1.4e-90 306.7 12.0 2 275 404 674 403 674 0.98 2 2 0.067 5.3e+03 -0.2 0.1 242 272 686 716 678 719 0.77
Sequence Information
- Coding Sequence
- atggAAGATGAGATGGAGAAATTTGAAATCACAGACTATGATATAGAAAATGAATTTAACATTAATCGACGACGGAAAGGTCTCAGTAAACATCAACAGATATATGGTATATGGGCCGATGACAGCGACAATGAAGTAGAAGATAGAAAATCCAGTAGAGGTGGCAAACATGGTAGGCAAGCAAAAGACTATTCTGCACCCATTGGATTTGTTGCTGGAGGAGTTCAGCAAGCAGGGAAAAaagataaaaaagaaattaaaaccgAAGCAGATGACTCAGATAATGAGAAGCCTGGTACATCCTTTAAAATGAGAGATAGCTCAGATTCTGAAGAGGAACCCACTCCTAGAGTTGgaTTTGGTGCCCCCCAAACCAGAAGACCTGCCCAACAATCAACAATGACTGAAGTCATCTCTGACATAGCTGGGTTCAGGACTCATAATAAAGTAGACCAAACACTCATCAAACAAGGAGTTGGCAATTGGGAAAAACACACCAAGGGAATTGGTGCTAAGCTTTTGCTGCAGATGGGCTACGAACCTGGTAAAGGTTTAGGCAAAGATCTACAGGGTATTTACGCCCCAGTTGAAGCACATTTAAGGAAAGGAAGGGGTGCTATAGGAGCCTATGGACCAGAAAAACCGGCTACTGTTCCAAAGaagaaaGACCTCTCTATAAAACAAGAAGATCATAATCAGAAAGAGTTAAAGGGCCCCTCCAAATGGAAAAGGACCGACGTAGCAGCTAAAAAGACGCGCTACTATTACAGAAGCGTTGACGATGTAATTGAGAAAGGTAAAAGACCAGGAAGTTTTAGAAATTCAGGAGTTTCAAGtgagCTTACTAAAGTTAAAGTTATTGATATGACTGGCCCTCAGCAAAGAGTTTTGAGCGGATACCACGCTCTTAGTGGTCTTAAAGCGCCACCTGGTGTGGAACATTTCGAGGATGTTGTCCAtaagaaatgtcaaaattttgcTCTGCCAGAAATACAACATAATTTGGATTTGTTAGTGGATATGTGTGAACAGgatATTATAAGGATTGATAGAGATAAAAGGCATACCCAAGATTCAATAACGGCCCTAAAGCAAGAGGAAGATGCCATAAAGGATCAAATTTTAATGGAAGACAAACTAGTTGATAACCTAAAATACGTTCTGGAAGTTGTCGATAAGCTCATGGATCCTTTGCAGAATTATTCCTTTAGTCAAATTGGAGAAATATTTAAAGGATTACTGAACAACTACTATGAAGAGTACTGTCGTTATGATCTAGGGCAGCTAGCTCCAGGTCTAGTGGGTCCTCTACTTACTTCCGCCCTAGCCAGCTGGAACCCTCTACAGCAACCAAAACAGTATACGGATTTCTTCAGCCAATGGAAGGAAATATTGGAGGAACCAAAGCACCGTGGGACTCTTGAAGGTAATAAAGTTGGGATACAGCCATACGATAGTCTCATATGGCACACTTGGGTGCCAGTTATGAGAGCTTGTATTAGTTTATGGAGTCCTCGAGATTGTGATCCAATGATCAACCTGATAGACGCCTGGAAGCCCCTTCTGCCAGTGTGGATACTAAACAACACATTTGATCAAATGATAATGCCCCGCATACTTAAGGAAGTTAACGATTGGAACCCGTTGACGGACACTATACCCATACATTTGTGGATACATCCGTGGATACCTTTGTTAGaCGAGAGATTGCAAGAGAAGATATATCCGATCATTCAAGAAAAATTAGGATCAGCTTTAAGTGGCTGGCATCCGTCGGATAGGTCAGCGAAATTGATGCTTCAGCCTTGGCAGCGTGCTTTAAGCAAGGGGTCATTTTTGGCGTTTCTGCTTAAACACATTGTTCCCAAGTTGCAACTTTGTATTCAGAATATGGTTATCAATCCACATCAGCAGTTGTTAGATCCCTGGAATTGGGTTATGGACTGGACCGACATGCTTTCCGTGGCTAATATGACACTTATACTGGACAAATTTTTCTTTCCAAGATGGTTGCAGACATTGGCCATGTGGTTAAATCACAGTCCAAATTACACACAAGTGACAGAGTGGTATTCTGGATGGAAGAGAATGGTGTCTGAGGAATTATTAGCACAAACAACAATTAAAGaaaGTTTTCATAAGGCATTAGAAATGATGAGTAGAGCGGTAGGAGTTATTCAGCAACCTGGTGCTAAGGAATCTATTGCCTACCTGTCCACCAACGAAATGAACGCAAGTCTTCCACCTCCACCTCCAAAGATTGAGagtCTGGCGGAAGCAGTTAGAACTGCAGCAAAAATACCACAAGGGTTCAAAGACTTAGTTACAAAACGATGCGAAGAAAGAGGAATACTTTTCGTACCAATTCCTAACAAATACCACGAGGCTAAGCAAGTCTATCGAATAGGATCAAATGGTGTACAGTGTTATATAGATAGGAACGTTATATTTTATAGTCAGAATAGTTCAACTTGGGTACCGACATCCCTAAATAAGTTACTAGACGTTTCTTCTTGA
- Protein Sequence
- MEDEMEKFEITDYDIENEFNINRRRKGLSKHQQIYGIWADDSDNEVEDRKSSRGGKHGRQAKDYSAPIGFVAGGVQQAGKKDKKEIKTEADDSDNEKPGTSFKMRDSSDSEEEPTPRVGFGAPQTRRPAQQSTMTEVISDIAGFRTHNKVDQTLIKQGVGNWEKHTKGIGAKLLLQMGYEPGKGLGKDLQGIYAPVEAHLRKGRGAIGAYGPEKPATVPKKKDLSIKQEDHNQKELKGPSKWKRTDVAAKKTRYYYRSVDDVIEKGKRPGSFRNSGVSSELTKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCQNFALPEIQHNLDLLVDMCEQDIIRIDRDKRHTQDSITALKQEEDAIKDQILMEDKLVDNLKYVLEVVDKLMDPLQNYSFSQIGEIFKGLLNNYYEEYCRYDLGQLAPGLVGPLLTSALASWNPLQQPKQYTDFFSQWKEILEEPKHRGTLEGNKVGIQPYDSLIWHTWVPVMRACISLWSPRDCDPMINLIDAWKPLLPVWILNNTFDQMIMPRILKEVNDWNPLTDTIPIHLWIHPWIPLLDERLQEKIYPIIQEKLGSALSGWHPSDRSAKLMLQPWQRALSKGSFLAFLLKHIVPKLQLCIQNMVINPHQQLLDPWNWVMDWTDMLSVANMTLILDKFFFPRWLQTLAMWLNHSPNYTQVTEWYSGWKRMVSEELLAQTTIKESFHKALEMMSRAVGVIQQPGAKESIAYLSTNEMNASLPPPPPKIESLAEAVRTAAKIPQGFKDLVTKRCEERGILFVPIPNKYHEAKQVYRIGSNGVQCYIDRNVIFYSQNSSTWVPTSLNKLLDVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847663;
- 90% Identity
- iTF_00196224;
- 80% Identity
- -