Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: -
Assembly: GCA_963920685.1
Location: OY987332.1:80724673-80726538[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-06 0.00018 24.2 0.0 2 36 19 53 18 60 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-06	0.00018	24.2	0.0	2	36	19	53	18	60	0.88

Sequence Information

Coding Sequence: ATGCCCCGAAAACACAAAAAGCAGTTAGGGAGTAGATCGTACCGAAATTTTTCCGACGAAACTTTGGAAGCTGCATTACGGGCTATTGAAAATGGTTCCGGAATTCGGGAAGCATCCCGGAGATTCGGAATTGACCCATCAACACTCTCACGGAAAAGAAGGAATTTGTTTTCCCGTAACCCTGGGAGGCAACCAGTATTTCCCAAGGAAGAGGAGGAAGCATTTGTTAATAATATCCTTTTGGCCGCACAGTGGGGGTTTCCATTAACCTCATATGATATACGGTTAACAGTAAAACAATACCTGGATCGTAAAGGTGTTCGGGAGAATCGTTTTGGAAATAACAATATGCCAGGTTTGGAATGggcaagaaattttttaaataggcacAAATCTAAGcttTCTGCGAGATTATGCGAAAACATAAAGCGGGCCAGAGCTCAAGTTTCCAGTGATATGATTAATGAATATTTTACTGAGTTGGAGAATAGTCTTGAAAATGTGCCtcctcaaaatattattaattatgatGAGACCAATTTTTGTGACGATCCTGGTCGTCAAAAAGTCATTGTTAAACGAGGTGCTCGTCATAGTGAAAGATATATGGATTCGTCCAAGACATCAGTGTCTGTTATGATGGCTGGTTCAGCTGCAGGGCATATATTACCACCATACGTCGTCTATAAGTCGCTACATTTATATGACACATGGACTGAAAATGGTATAGAGGGTGCGAAATATAATCGGTCGAAGTCAGGGTGGTTTGACATTAcaatatttgaagactggtttttaaaaattgctttgCAATATTTCCGGCAAAAAGATGGACCAAAAGTCATGATAGGAGACAATTTGTCGAGCCACCTTTCAGATCGAGTGATGCGTACCTGTAGAGAACATAATATTAGATTTATATTATTGCCGCCTAACTCGACACATTTATGCCAGCCATTGGACGTGGCGTTTTTTAGACCAGTTAAATCTGCTTGGAGGGATGTTCTacttaattggaaacaaaaaaataaaggttGTATTCCAAAGGATCAATTTCCAAGATTATTAAGACAAACTCTTGAAAAAGTGAAGCCTGAAAATTTGGTAGCAGGATTTAGGGCCACAGGGATATATCCGCTGAATAGAGAAGAAGTGCTAAAGCGACTGCCAGATTGGTGCCAAGCACAAGCACCTTTAAATCAAGACGCCTTAAACAATAGTTTTACAGACTTGTTACAAAAGATTCGCTTTCCAGATGAAAATAGGCAGATTAAGCGCAAAAAGAGATTAAATGTAATTGCAGGAAGAAGTGTATCTTTTGATACAAATGAAAAAGACGAAGCAACAAATGTAATAGAATCTGAAGATCTTATAGAAGATGATTTTAACACAAAATTATTTCCGAGAGCCACCACTTCAAAAGAGAGCGACAGTTCGCTCTCGGATAGCCACATGTCTGTCCATGATTCAGATTCCGACAATTGGGATGAATTTAACTTAGAACCAAATGAATACAATGAAGGAGACTACATATTGGTTCAATTTATTCCTGAAACAAAGAGACGACAGGCCGTGATGTATGTTGgtcatgttcaagaagttttacgtgaaaatgataataataattcacTGTATTGCAAATTTCTAAGAGCGGCCGCAGGTACAAAATTGCCTAAAAATAGCTTTAAATATCCAGAAATTGATGATTTATCAATTGTCGATATAAATCAAGTAAAAATGAAGTTACCCGCACCGAAAGCAAAACGTGGAGTTTATACATTTCCCGGTCATTTGAAACTTACATAA
Protein Sequence: MPRKHKKQLGSRSYRNFSDETLEAALRAIENGSGIREASRRFGIDPSTLSRKRRNLFSRNPGRQPVFPKEEEEAFVNNILLAAQWGFPLTSYDIRLTVKQYLDRKGVRENRFGNNNMPGLEWARNFLNRHKSKLSARLCENIKRARAQVSSDMINEYFTELENSLENVPPQNIINYDETNFCDDPGRQKVIVKRGARHSERYMDSSKTSVSVMMAGSAAGHILPPYVVYKSLHLYDTWTENGIEGAKYNRSKSGWFDITIFEDWFLKIALQYFRQKDGPKVMIGDNLSSHLSDRVMRTCREHNIRFILLPPNSTHLCQPLDVAFFRPVKSAWRDVLLNWKQKNKGCIPKDQFPRLLRQTLEKVKPENLVAGFRATGIYPLNREEVLKRLPDWCQAQAPLNQDALNNSFTDLLQKIRFPDENRQIKRKKRLNVIAGRSVSFDTNEKDEATNVIESEDLIEDDFNTKLFPRATTSKESDSSLSDSHMSVHDSDSDNWDEFNLEPNEYNEGDYILVQFIPETKRRQAVMYVGHVQEVLRENDNNNSLYCKFLRAAAGTKLPKNSFKYPEIDDLSIVDINQVKMKLPAPKAKRGVYTFPGHLKLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01238904;
90% Identity: iTF_01240528;
80% Identity: iTF_01243433;