Basic Information

Insect: Polydrusus cervinus
Gene Symbol: -
Assembly: GCA_935413225.1
Location: CAKXYS010000830.1:270516-272390[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.9e-07 5.1e-05 24.2 0.0 2 36 19 53 18 60 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.9e-07	5.1e-05	24.2	0.0	2	36	19	53	18	60	0.88

Sequence Information

Coding Sequence: ATGCCCCGAAAACACAAAAAGCAGTTAGGGAGTagatcgtaccgaaatttttcCGACGAAACTTTGGAAGCTGCATTACGGGCTATTGAAAATGGTTCCGGAATTCGGGAAGCATCCCGGAGATTCGGAATTGACCCATCAACACTCTCACGGAAAAGAAGGAATTTGTTTTCCCGTAACCCTGGGAGGCAACCAGTATTTCCCAAGGAAGAGGAGGAagcatttgttaataatatccTTTTGGCCGCACAGTGGGGGTTTCCATTAACCTCATATGATATACGGTTAACAGTAAAACAATACCAGGATCGTAAAGGTGTTCGGGAGAATCGTTTTGGAAATAACAATATGCCAGGTTTGGAATGggcaagaaattttttaaataggcacAAATCTAAGctttcTGCGAGATTATGCGAAAACATAAAGCGGGCCAGAGCTCAAGTTTCCAGTGAtatgattaatgaatattttactGAGTTGGAGAATAGTCTTGAAAATGTGCCtcctcaaaatattattaattatgatGAGACCAATTTTTGTGACGATCCTGGTCGTCAAAAAGTCATTGTTAAACGAGGTGCTCGTCATAGTGAAAGATATATGGATTCGTCCAAGACATCAGTGTCTGTTATGATGGCTGGTTCAGCTGCAGGGCATATATTACCACCATACGTCGTCTATAAGTCGCTACATTTATATGACACATGGACTGAAAATGGTATAGAGGGTGCGAAATATAATCGGTCGAAGTCAGGGTGGTTTGACATTACAATATTTGAAGactggtttttaaaaattgctttgCAATATTTCCGGCAAAAAGATGGACCAAAAGTCATGATAGGAGACAATTTGTCGAGCCACCTTTCAGATCGAGTGATGCGTACCTGTAGAGAACATAATATTAGATTTATATTATTGCCGCCTAACTCGACACATTTATGCCAGCCATTGGACGTGGCGTTTTTTAGACCAGTTAAATCTGCTTGGAGGGATGTTCTACTTAAttggaaacaaaaaaataaaggttGTATTCCAAAGGATCAATTTCCAAGATTATTAAGACAAACTCTTGAAAAAGTGAAGCCTGAAAATTTGGTAGCAGGATTTAGGGCCACAGGGATATATCCGCTGAATAGAGAAGAAGTGCTAAAGCGACTGCCAGATTGGTGCCAAGCACAAGCACCTTTAAATCAAGACGCCTTAAACAATAGTTTTACAGACTTGTTACAAAAGATTCGCTTTCCAGATGAAAATAGGCAGATTAAGCGCAAAAAGAGATTAAATGTAATTGCAGGAAGAAGTGTATCTTTTGATACAAATGAAAAAGACGAAGCAACAAATGTAATAGAATCTGAAGATCTTATAGAAGATGattttaacacaaaattatTTCCGAGAGCCACCACTTCAAAAGAGAGCGACAGTTCGCTCTCGGATAGCCACATGTCTGTCCATGATTCAGATTCCGACAATTGGGATGAATTTAACTTAGAACCAAATGAATACAATGAAGGAGACTACATATTGGTTCAATTTATTCCTGAAACAAAGAGACGACAGGCCGTGATGTATGTTGGTCATGTTCAAGAAGTTTTacgtgaaaatgataataataattcacTGTATTGCAAATTTCTAAGAGCGGCCGCAGGTACAAAATTGActaaaaatagctttaaataTCCAGAAATTGATGATTTATCAATTGTCGATATAAATCAAGTAAAAATGAAGTTACCCGCACCGAAAGCAAAACGTGGAGTTTATACATTTCCCGGTCATTTGAAACTTAcatgttttgtttaa
Protein Sequence: MPRKHKKQLGSRSYRNFSDETLEAALRAIENGSGIREASRRFGIDPSTLSRKRRNLFSRNPGRQPVFPKEEEEAFVNNILLAAQWGFPLTSYDIRLTVKQYQDRKGVRENRFGNNNMPGLEWARNFLNRHKSKLSARLCENIKRARAQVSSDMINEYFTELENSLENVPPQNIINYDETNFCDDPGRQKVIVKRGARHSERYMDSSKTSVSVMMAGSAAGHILPPYVVYKSLHLYDTWTENGIEGAKYNRSKSGWFDITIFEDWFLKIALQYFRQKDGPKVMIGDNLSSHLSDRVMRTCREHNIRFILLPPNSTHLCQPLDVAFFRPVKSAWRDVLLNWKQKNKGCIPKDQFPRLLRQTLEKVKPENLVAGFRATGIYPLNREEVLKRLPDWCQAQAPLNQDALNNSFTDLLQKIRFPDENRQIKRKKRLNVIAGRSVSFDTNEKDEATNVIESEDLIEDDFNTKLFPRATTSKESDSSLSDSHMSVHDSDSDNWDEFNLEPNEYNEGDYILVQFIPETKRRQAVMYVGHVQEVLRENDNNNSLYCKFLRAAAGTKLTKNSFKYPEIDDLSIVDINQVKMKLPAPKAKRGVYTFPGHLKLTCFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01243426; iTF_01243428; iTF_01243430; iTF_01243432; iTF_01243433; iTF_01243434; iTF_01243435; iTF_01243436; iTF_01243437; iTF_01243438; iTF_01243470; iTF_01243439; iTF_01243440; iTF_01238897; iTF_01243441; iTF_01238898; iTF_01243442; iTF_01238899; iTF_01243443; iTF_01238900; iTF_01243444; iTF_01238901; iTF_01243445; iTF_01238902; iTF_01243446; iTF_01238903; iTF_01243447; iTF_01243448; iTF_01243449; iTF_01243450; iTF_01238907; iTF_01243451; iTF_01243452; iTF_01243453; iTF_01243454; iTF_01240528; iTF_01240532;
90% Identity: iTF_01240528;
80% Identity: -