Pter000058.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- CAWUCV010000010.1:3844-6710[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-07 6.6e-05 25.5 0.1 5 34 74 102 73 107 0.91
Sequence Information
- Coding Sequence
- ATGAAGAAAAAACGCACATCTCAAAAACCATTCCAAATTTACAATAACTTCATCAAAGAAAATCCGGTTTTAATATCAGGAAAATTGCACCCAGCTTGTAGTCCTGAAAACTTGGAGGGTTTGTGGGCTAAGCTCACACAAATTCTAAATTCTTGTGGGGATGGACCTATCAGAGAGGTGGCGTCATGGAAAAGAAAACAAATATATAACCCAGTCTACCTAAGAAGGGCTGTTGAGGCGGTCAAACGAGGGATGGCTATAAGAACGGCGGCGGAAAACTATGGAGTGCCATACAGTACGGTGCATGATAATGTCCGTGCGCCTGCGGAAGGAAAAATTGGAGGCCAACCGGCTCTATCTGCTGTGGAAGAACGCAAGCTAGCAGACGCTCTTGTTCTCTGTGCCGACTGGGGGTTTCCCTTCAAAAGCTATGATGTGAGGTACATGGTACAACAATACTTAACTAAGGCTGGAAGAACCGAAAAGCGCTTTGATAACAATTTTCCAggagtcgactggttcaaatctTTTATGGGCAGACACGATGATTTGACCGTAAAGTTAGCTGAAAACACAAAGAGGGTGAGAGCAGCGGTAACATATGAGGTAGTtcaaaagtattttaacgaatTGGGCGCTACCATCGATGGCATTCCTCCTGCTAACATTATAAACTACGATGAGACGAACTTTTGTGACGATCCGGGTCAAGCTTTGGTGGTGGTCAGAAAAGGCAAAAAACATGCCCATAGAGTGATTGATACTTCTAAATCAAGCACGAGCGTAATGTTCGCGGTGGCAGGAGATGGAAAATTATTACCGCCTTATATTATATACAAAGCTAAACACATGTATGAAGGCTGGACTGAGGGCGGCTTCCCAAATGCCCGGTATAATAGAACCCTAAGCGGCTGGTTTGATGCCGATTCATTTGAGGACTGGTTCTTGTTCACTGCGCTACCATATTTTAACTCACTGGAAGGAAACAAAGTTATGTTAGGTGATAATCTCTGCAGCCATTTAACACTCAGCGTTCTAGAGGCCTGCGAAAATAACAACATTAAATTTGTTCTTCTTCCTCCCAACTCAACCGACTTACTGCAGCCTCTAGATGTTGCCTACTTTCGCCCCCTCAAACATGCATGGAAAAAGACCTTAGAAGATTGGAAACTCAAAAATAGGGGAGTCTTGCCAAAAACCGTTTTTCCGAGACTTTTAAACGCAACCATTGATAATGTCGGTTTAAGAAGTGGGGAAAACACAAAAGCAGGCTTTAAGGCATGTGGGATAGTCCCCTTTAATCCAGACCAAACGCTAAAAACAATAAGTCATTTAAAAAAGacagaaattgctgaaaatggaGTAGAGCAAACATGGAGTGACACAATTGTTTCCCATTTAAGACAATTAAGAACGGGAGGGGAAAGCGCTCCGAAACGAGGTAAAAGAGTAAGTGTGGAAGCCGGCAAGAGTGTTTGTGTTGGAGATTTAATTAATACTCTTGTGGAGAAAGAGCAGGAGGAAGAAATGGTTGAGGACCAATCTCTAGGAATGTCCCAAGATTTATCAGATCTTTCTGATGTAGAGGAGgctcaaaataattatttaagcaGTGAGGAAAACGAGGAAAACAATGAAAACCAAATTTTTGGCCTTGGAGACTTTGTGATAGTAAAGTTTTCGACCAATAAGCGAAACAgattttttgttgctaaaattgaGCAAATTAATGAAACGGACAATACTTTTACTgtcaactgtttacgaaaaaaaattacaaaaaaagaaaccTTTTTTACATACCCCAATGTGCAAGATATATCCGAAGTTAAACAGGATCAAATAATGAGAAAAATTTTTGGAAAGTCCTCAAGAAGAgggcaatatatttttaaacatctttctaataattataatcttgaataa
- Protein Sequence
- MKKKRTSQKPFQIYNNFIKENPVLISGKLHPACSPENLEGLWAKLTQILNSCGDGPIREVASWKRKQIYNPVYLRRAVEAVKRGMAIRTAAENYGVPYSTVHDNVRAPAEGKIGGQPALSAVEERKLADALVLCADWGFPFKSYDVRYMVQQYLTKAGRTEKRFDNNFPGVDWFKSFMGRHDDLTVKLAENTKRVRAAVTYEVVQKYFNELGATIDGIPPANIINYDETNFCDDPGQALVVVRKGKKHAHRVIDTSKSSTSVMFAVAGDGKLLPPYIIYKAKHMYEGWTEGGFPNARYNRTLSGWFDADSFEDWFLFTALPYFNSLEGNKVMLGDNLCSHLTLSVLEACENNNIKFVLLPPNSTDLLQPLDVAYFRPLKHAWKKTLEDWKLKNRGVLPKTVFPRLLNATIDNVGLRSGENTKAGFKACGIVPFNPDQTLKTISHLKKTEIAENGVEQTWSDTIVSHLRQLRTGGESAPKRGKRVSVEAGKSVCVGDLINTLVEKEQEEEMVEDQSLGMSQDLSDLSDVEEAQNNYLSSEENEENNENQIFGLGDFVIVKFSTNKRNRFFVAKIEQINETDNTFTVNCLRKKITKKETFFTYPNVQDISEVKQDQIMRKIFGKSSRRGQYIFKHLSNNYNLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00330517;
- 90% Identity
- iTF_01241733; iTF_01243201; iTF_01243204; iTF_01243205; iTF_01243179; iTF_01243182; iTF_01243164; iTF_01243196; iTF_01243198; iTF_01243199; iTF_01243200;
- 80% Identity
- -