Pter005359.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987326.1:59145706-59146020[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-07 3.3e-05 26.5 0.0 4 38 21 56 18 62 0.85
Sequence Information
- Coding Sequence
- atgCCACGTGTGTACAAACGTCCGCTCGGCTCACGCCAGTATAGGAACTTTACTCAGAAAGCTTTAGAAAATGCATTGCAAGCAGTAGTTGATGGTAGAATGGGCATAAGGCAAGCGTCAAGAGAATTTAAAGTTATTGACGGTACGCTCAACAACAAGTATCATGGCAGACATGGGGCACAACATGGTGGTCAGATGGTGTTCTCAAGAGCTGAAGAAAATGCTTTTGTTGATGCGATCGCGAAATGTTCCGACTGGGGCTTTCCCTTAAGTAACACGTTATTTCTTAGATTTCGTTTAGTTGGTTTTTGTTAA
- Protein Sequence
- MPRVYKRPLGSRQYRNFTQKALENALQAVVDGRMGIRQASREFKVIDGTLNNKYHGRHGAQHGGQMVFSRAEENAFVDAIAKCSDWGFPLSNTLFLRFRLVGFC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242589;
- 90% Identity
- iTF_01243151; iTF_01242737; iTF_01242711; iTF_01242681; iTF_01242940; iTF_01242589;
- 80% Identity
- -