Pter127877.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987335.1:19740491-19740826[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-08 1.7e-06 30.6 0.1 4 39 21 57 18 62 0.84
Sequence Information
- Coding Sequence
- atgCCACGTGTGTACAAACGTCCGCTCGGCTCACGCCAGTATAGGAACTTTACTCAGAAAGCTTTAGGAAATGCATTGCAAGCAGTAGTTAATGGTAGAATGGGCATAAGGCAAGCGTCAAGAGAATTTAAAGTTATATACGGTACGCTCAACAACAAGTATCATGGCAGACATGGGGCACAACATGGTGCTCAGATGGTGTTCTCAAGAGCTGACGAAAATGCTTTTGTTGATGCGATCGCGAAATGTTCCGACTGGGGCTTTCCCTTAAGTAACGCGTTATTTCTTAGATTTCGTTTAGTTggtttttgtcaaatcttatcaTTTAATCAATAG
- Protein Sequence
- MPRVYKRPLGSRQYRNFTQKALGNALQAVVNGRMGIRQASREFKVIYGTLNNKYHGRHGAQHGAQMVFSRADENAFVDAIAKCSDWGFPLSNALFLRFRLVGFCQILSFNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01243114; iTF_01243151; iTF_01242737; iTF_01242711; iTF_01242681; iTF_01242940;
- 90% Identity
- iTF_01243114;
- 80% Identity
- -