Ppte019364.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018376.1:92236710-92240744[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-06 0.00023 22.9 0.0 1 40 18 58 18 60 0.92
Sequence Information
- Coding Sequence
- ATGCCTAGGATTTACAAGAAAAAGCTTGGAGCGAGGAAATATCGTAATTATGATCCTGCTCAATTAGCTAGAGCAGTATTTGccataaaatttgaaaacatcaGCTACCGAAGGGCGGAAGCGCTATATGGTATTCCAATGAGAACGTTATGCAACAAAGTCAACAACAAACACACTTTAAATCCCGGATCACCTACAGTATTAACCGAAATAGAAGAACGACATTTCGTAGACGTTTTAATCGCAGCTAGCGAGTATGGTAGCCCATTGACTTGTTTTGACCTTAGGTTAGTAGTGAAGAAGTTTTTAGACCGCAGTGgaagaaaaatcaaaatattcccAGACAATCTTCCGGGTACAGAATGGGCGCTAAATTTTTTGTCCAGACATAAGGACAGATTATCTAAGAGAAGTTGCCAAAATATCAAATATGTTAGAGCCGAAAAAACAGAAAccgaatttataaattattttgataacTTGTCAAAATCGCTAGAAGGGGCTCCAATCTGTAATATTTTGAATTACGATGAAACAAATCTTACGGACGACCCGGGGGCCACAAAATGTATATTTAGGAGAGGGATGAAGTATCCTGAAAGGATAATGAACAGCACTAAATCCTCGATATCAGTGATGTTTGCGATAACCGGTGACGGAAAAAGTTTACCACCATATGTGGTCTACAAAGCGGAGAGAATCTACGATCAGTGGACAATTGGAGGTCCTCCGAATACAAGATATAACCGCTCAGCTTCAGGGTGGTTTGACAGCTCATCATTCGAAGATTGGTTTGAATCAATAGTAGTGCCGTGGGCAAAATGTCTTCCTggtagaaaaataataataggggACAATTTATCCTCACACATTAATGTACATATGTTTCAAAACTGCCAGAGGAACCAAATAAGTTTTGTTTATCTCCCACCAAACTCCACCCATTTATCGCAACCACTTGATGTTGCTTACTACGCTCCGTTGAAGAAGAAGTGGAGacagattttacaaaattacaaaTTGAAAAACCCTAGAGAGTCGTCTGTAAGCAAGACATCCTTTCCACATCTTCTGAGAACCCTTGTGGACGAGCTTAAAACCAAAGACAAACAAACCATAACAAGCGCTTTTAGGGCAACAGGAATAATTCCTCTTGATCCTTCACAAGTCCTTAAAAGACTTCCAAAACAAAGAGCCGACAGTAACTTACAAAATGAGGTGTCTGAAACTTTAACACAATTTTTACAAGAAATCAGGTCTCCTCCAGAAAAGGTATCAAAACCTAGAAAAAAGATGCTAAGGATAGAACCAGGAAAATCTGTCAGCTACGAAGATATGCGAAATATTTCTGGCGATTTAGCTGCTCCATCAACAAGTGAACTTAGCAAATCAACGAGAGAAAATAGCCCCGAAATTGATCCGGAAAATGACGGTGATAGCTACCTTACTATCACAGAAgatgaaactttaaaaacaaacatcaaTCCTGAAATAGGGGATTATGTTATTGTGCCCTTCGCAACAAAAAAAACCCTTGTTCACTTTGTTGCTTTGGTAATTGAAAAGCCTTTTGCTGAAGTCAAGGTTAAgttcttgagaaaaaaaaaggatgATAATTTGGCAGTTAGGGCCAGGCACAAACCCGTACGCGACCATGGCAATTCATATCGTCCCAGTGATCATTCACTGGAATCTTCCGATTCCAATGCTTCCGAAAATGACTATGTAGGAGATGGTGAAATTGTTGAACCTGAGCGAGATGAAGCTGAGGAAGCTGTGAttcaaaatatgggtaaaacaaACGAAATTTTAAAACGTAACCGACGTGATGAGAGCACATGGGCTAGGATCATGATAAAAAGGAACAGGAATCGACGACGTGACGAATATGAATTACAGAGGAAACCGTGTTCCACCTAA
- Protein Sequence
- MPRIYKKKLGARKYRNYDPAQLARAVFAIKFENISYRRAEALYGIPMRTLCNKVNNKHTLNPGSPTVLTEIEERHFVDVLIAASEYGSPLTCFDLRLVVKKFLDRSGRKIKIFPDNLPGTEWALNFLSRHKDRLSKRSCQNIKYVRAEKTETEFINYFDNLSKSLEGAPICNILNYDETNLTDDPGATKCIFRRGMKYPERIMNSTKSSISVMFAITGDGKSLPPYVVYKAERIYDQWTIGGPPNTRYNRSASGWFDSSSFEDWFESIVVPWAKCLPGRKIIIGDNLSSHINVHMFQNCQRNQISFVYLPPNSTHLSQPLDVAYYAPLKKKWRQILQNYKLKNPRESSVSKTSFPHLLRTLVDELKTKDKQTITSAFRATGIIPLDPSQVLKRLPKQRADSNLQNEVSETLTQFLQEIRSPPEKVSKPRKKMLRIEPGKSVSYEDMRNISGDLAAPSTSELSKSTRENSPEIDPENDGDSYLTITEDETLKTNINPEIGDYVIVPFATKKTLVHFVALVIEKPFAEVKVKFLRKKKDDNLAVRARHKPVRDHGNSYRPSDHSLESSDSNASENDYVGDGEIVEPERDEAEEAVIQNMGKTNEILKRNRRDESTWARIMIKRNRNRRRDEYELQRKPCST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01240579; iTF_01238920; iTF_01238921; iTF_01238922; iTF_01238923; iTF_01238924; iTF_01238925; iTF_01240569; iTF_01240570; iTF_01240571; iTF_01240572; iTF_01240573; iTF_01240574; iTF_01240575; iTF_01240576;
- 90% Identity
- iTF_01238920;
- 80% Identity
- -