Basic Information

Insect: Polydrusus cervinus
Gene Symbol: -
Assembly: GCA_935413225.1
Location: CAKXYS010000119.1:178658-180412[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-06 0.00011 23.1 0.0 1 40 18 58 18 60 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-06	0.00011	23.1	0.0	1	40	18	58	18	60	0.92

Sequence Information

Coding Sequence: ATGCCTAGGATTTACAAGAAAAAGCTTGGAGCGAGGAAATATCGTAATTATGATCCTGCTCAATTAGCTAGAGCAGTATTTgccataaaatttgaaaacatcaGCTACCGAAGGGCGGAAGCGCTATATGGTATTCCAATGAGAACGTTATGCAACAAAGTCAACAACAAACACACTTTAAATCCCGGATCACCTACAGTATTAACCGAAATAGAAGAACGACATTTCGTAGACGTTTTAATCGCAGCTAGCGAGTATGGTAGCCCATTGACTTGTTTTGACCTTAGGTTAGTAGTGAAGAAGTTTTTAGACCGCAGTggaagaaaaatcaaaatattcccAGACAATCTTCCGGGTACAGAATGGGCGCTAAATTTTTTGTCCAGACATAAGGACAGATTATCTAAGAGAAGTtgccaaaatatcaaatatgttAGAGCCGAAAAAACAGAAAccgaatttataaattattttgataactTGTCAAAATCGCTAGAAGGGGCTCCAATCTGTAATATTTTGAATTACGATGAAACAAATCTTACGGACGACCCGGGGGCcacaaaatgtatatttagGAGAGGGATGAAGTATCCTGAAAGGATAATGAACAGCACTAAATCCTCGATATCAGTGATGTTTGCGATAACCGGTGACGGAAAAAGTTTACCACCATATGTGGTCTACAAAGCGGAGAGAATCTACGATCAGTGGACAATTGGAGGTCCTCCGAATACAAGATATAACCGCTCAGCTTCAGGGTGGTTTGACAGCTCATCATTCGAAGATTGGTTTGAATCAATAGTAGTGCCGTGGGCAAAATGTCTTCctggtagaaaaataataataggggACAATTTATCCTCACACATTAATGTACATATGTTTCAAAACTGCCAGAGGAACCAAATAAGTTTTGTTTATCTCCCACCAAACTCCACCCATTTATCGCAACCACTTGATGTTGCTTACTACGCTCCGTTGAAGAAGAAGTGGAGACAGATTTTACAAAATTACAAATTGAAAAACCCTAGAGAGTCGTCTGTAAGCAAGACATCCTTTCCACATCTTCTGAGAACCCTTGTGGACGAGCTTAAAACCAAAGACAAACAAACCATAACAAGCGCTTTTAGGGCAACAGGAATAATTCCTCTTGATCCTTCACAAGTCCTTAAAAGACTTCCAAAACAAAGAGCCGACAGTAACTTACAAAATGAGGTGTCTGAAACTTTAACacaatttttacaagaaatcagGTCTCCTCCAGAAAAGGTATCAAAACCTAGAAAAAAGATGCTAAGGATAGAACCAGGAAAATCTGTCAGCTACGAAGATATGCGAAATATTTCTGGCGATTTAGCTGCTCCATCAACAAGTGGACTTAGCAAATCAACGAGAGAAAATAGCCCCGAAATTGATCCGGAAAATGACGGTGATAGCTACCTTACTATCACAGAAgatgaaactttaaaaacaaacatcaaTCCTGAAATAGGGGATTATGTTATTGTGCCCTTCGCAACAAAAAAAACCCTTGTTCACTTTGTTGCTTTGGTAATTGAAAAGCCTTTTGCTGAAGTCAAGGTTAAGTTcttgagaaaaaaaaaggatgGTAGTTTCGTATTTCCACAAGCAGATGATATTTCTGTCCTCGATGTCgttgatattattaaaatattagataaaCCTGTAATTTCGCCGAGAGGATTTCACCACTTTGAACATAACTTTTctgaatataataatatgcGTTAG
Protein Sequence: MPRIYKKKLGARKYRNYDPAQLARAVFAIKFENISYRRAEALYGIPMRTLCNKVNNKHTLNPGSPTVLTEIEERHFVDVLIAASEYGSPLTCFDLRLVVKKFLDRSGRKIKIFPDNLPGTEWALNFLSRHKDRLSKRSCQNIKYVRAEKTETEFINYFDNLSKSLEGAPICNILNYDETNLTDDPGATKCIFRRGMKYPERIMNSTKSSISVMFAITGDGKSLPPYVVYKAERIYDQWTIGGPPNTRYNRSASGWFDSSSFEDWFESIVVPWAKCLPGRKIIIGDNLSSHINVHMFQNCQRNQISFVYLPPNSTHLSQPLDVAYYAPLKKKWRQILQNYKLKNPRESSVSKTSFPHLLRTLVDELKTKDKQTITSAFRATGIIPLDPSQVLKRLPKQRADSNLQNEVSETLTQFLQEIRSPPEKVSKPRKKMLRIEPGKSVSYEDMRNISGDLAAPSTSGLSKSTRENSPEIDPENDGDSYLTITEDETLKTNINPEIGDYVIVPFATKKTLVHFVALVIEKPFAEVKVKFLRKKKDGSFVFPQADDISVLDVVDIIKILDKPVISPRGFHHFEHNFSEYNNMR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01240580;
90% Identity: iTF_01238920;
80% Identity: iTF_01238923; iTF_01238924; iTF_01240570; iTF_01240571; iTF_01240572; iTF_01240573; iTF_01240574; iTF_01240575; iTF_01240576; iTF_01240579;