Pcer027971.1
Basic Information
- Insect
- Polydrusus cervinus
- Gene Symbol
- retn
- Assembly
- GCA_935413225.1
- Location
- CAKXYS010000767.1:74229-96139[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-17 1.7e-13 52.0 0.1 29 89 4 62 1 62 0.93 2 2 0.17 1.3e+03 1.2 0.0 24 38 206 220 163 225 0.52
Sequence Information
- Coding Sequence
- ATGGCCAAATCTGTTCTGGATCTATACGAGTTGTATAATCTGGTAATCGCGCGAGGGGGCTTAGTCGACGTCATCAACAAGAAATTGTggcaagaaattatcaaaggACTCCATTTACCCTCTTCGATAACATCAGCAGCTTTTACGTTAAGGACTCAaTACATGAAATATCTTTACCCCTATGAATGTGAAAAACGTCGCCTCAGTACGCCAGCGGAATTACAGGCCGCCATCGATGGTAATAGAAGGGAAGGTAGACGAAGTAGTTACGGTCAATATGATTCCATGTCCAGATCTCCAAATCCCACTCACCAACTCAACCCACTAGCTCTAGTCTCGGCAGCTCAGCAACAACAATTGGCAGCTAGAATGAGTTCCGTCATGTCGGGCGGTATAGGTTTGCATAATGGGGCTCACCACCCCAGTCATCCAACACCTATGAACCAGCCTCTCAATGGTGGACCGCTTCCAAACTTGCCAAGCTTAGCACCCACTGATTTTGAAACTAGAATGATGGAGTATATGAAATTACTTAACAAGGAGATCAGGTCCACAGCCAACACCCCACCTCGCCAAGGAGACATGTCACCTCCAAACGCTACCTCACCGCTCACGCCCTTTGAGATGCAGCAGCGCATGAACCTCTTTAACCTCTACAACAATAACCAGCCTCAAATTGAACCACAGAAGGAACCTATAAACCTTTCTGAACCGTCACCagcgataaaaagagaacctgAATGTCGAGAGTCTCCTCCGCCTGCCAAAAGAGTAACCAAAGAAGAAGAGGAGCCACCCAAATCGGTGTCGCCTCCTTCACCTATGACAACTCCTAGTACTcacattaaaattaatagtagagGTGACTCAAGGAATGGCGACAACTCCCTCGTAGTCAGCATGGAACTCAACGGAGTTACTTATCAAGGAGTCCTCTTCGCTCAGACAACCCAGCCTAGTTCGCATACAGCAATGGCGTCCTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDSMSRSPNPTHQLNPLALVSAAQQQQLAARMSSVMSGGIGLHNGAHHPSHPTPMNQPLNGGPLPNLPSLAPTDFETRMMEYMKLLNKEIRSTANTPPRQGDMSPPNATSPLTPFEMQQRMNLFNLYNNNQPQIEPQKEPINLSEPSPAIKREPECRESPPPAKRVTKEEEEPPKSVSPPSPMTTPSTHIKINSRGDSRNGDNSLVVSMELNGVTYQGVLFAQTTQPSSHTAMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00845661;
- 90% Identity
- iTF_01239900;
- 80% Identity
- -