Kmac051952.1
Basic Information
- Insect
- Kuschelorhynchus macadamiae
- Gene Symbol
- retn
- Assembly
- GCA_030620095.1
- Location
- JAUTXW010001834.1:161422-180001[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-17 5.5e-13 52.0 0.1 29 89 4 62 1 62 0.93 2 2 0.11 2.7e+03 1.7 0.0 8 39 170 221 163 230 0.53
Sequence Information
- Coding Sequence
- ATGGCCAAATCAGTTCTAGACCTTTATGAGTTATATAATCTGGTAATTGCTCGAGGAGGCTTAGTCGATGTCATTAATAAGAAATTGTGGCAAGAAATCATCAAAGGGCTTCACCTTCCCTCTTCAATAACTTCTGCAGCATTTACTTTAAGGACCCAATACATGAAGTACTTATATCCGTACGAATGTGAAAAGCGCCACCTCAGTACACCAACAGAACTGCAAGCCGCTATTGACGGTAACAGAAGAGAAGGAAGGAGAAGTAGCTATGGTCAATATGATACCATGTCCAGATCTCCTAGTCATCCAACTCATCAACTAAACCCACTTTCGCTAGTGTCTGCAGCCCAACAACAACAGTTGGCAGCGAGGATGAGTGTTATGTCGGGAGGTATAAGCTTGCACAATGGAGCTCACCATCCTAGTCATCCACAACCCATGAACCAACCAATGAATGGAGGACCCCTGCCTAGCTTACCAAACTTAGCACCCAGTGAGTTTGAGGCCAGAATGATGGAATATATGAAATTGTTGAATAAAGAAATGAGAGCCACAACGACCACATCACCACGTCAAGGTGAAATGACACCACCAAACGCTACCTCACCCCTTACCCCGTTCGAAGTACAACAACGCATGAACCTATTCAATTTGTACAATAACAATCAGACACAGATCGAACCTCAAAAAGAACCAATAAACTTATCAGAACCTACACCTGCGATAAAAAGGGAGCCAGAATGCAGAGATTCCCCTCCCCCAAAAAGAGTATCTAAAGAAGAAGACGAGCCACCTAAATCGTTGTCGCCACCTTCACCTGTTCACACTCCAAGCACTcacattaaaattaatagtagagGCGACTCACGAAATGGCGATAATTCTTTGGTCGTTAGCATGGAACTAAACGGAGTGACCTACCAAGGCGTCCTGTTTGCCCAAAATACTCAGCCCAACTCACACACAGCAATGGCTTCCTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRHLSTPTELQAAIDGNRREGRRSSYGQYDTMSRSPSHPTHQLNPLSLVSAAQQQQLAARMSVMSGGISLHNGAHHPSHPQPMNQPMNGGPLPSLPNLAPSEFEARMMEYMKLLNKEMRATTTTSPRQGEMTPPNATSPLTPFEVQQRMNLFNLYNNNQTQIEPQKEPINLSEPTPAIKREPECRDSPPPKRVSKEEDEPPKSLSPPSPVHTPSTHIKINSRGDSRNGDNSLVVSMELNGVTYQGVLFAQNTQPNSHTAMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00195736; iTF_01106975; iTF_01238348; iTF_01239900; iTF_01186803;
- 90% Identity
- -
- 80% Identity
- -