Plab001927.1
Basic Information
- Insect
- Pollenia labialis
- Gene Symbol
- Rel
- Assembly
- GCA_949318255.1
- Location
- OX439139.1:37399393-37403650[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-52 4.3e-48 165.0 1.2 1 168 158 336 158 337 0.93 2 2 1.1 1.4e+04 -2.7 0.1 58 87 849 880 821 887 0.56
Sequence Information
- Coding Sequence
- atggATAATATGATGCCATATTTTAGTGCCACAAATGACAAGGATATAACCGATCTGGATACACTGAAACGTATACGACGAGTCAGTGAATGTTCTATGGGTAGTACTAGTGGCTATAATAGCACAACTTCTCCAGGACCAGATAATTCTCCAAATTCAAATCATTATTCGCCAGTACAATCACCTGATTCTGTTTTGCAAGCTGAATTTTCCCAATTAGTCTTACCCACTATATCTTATCAACAAAATTCGCCGCAATATCTACAATTGCAAAATGTCCAGCACATGAATGTAAATAACATCATCAGCAATAACAATCAGTCAATGTACTATcaacaaaataatatgaatttcTCGCCACATTTAAACTTTGGAAATCCTATAAATTATCAATTACCATTACACTCATCAGCAGCAGTAGAACCAACAACAATGCCATACAAAGAAGTTAAATATGAATATGAAGCAACTTTGCGTATTACCGAACAACCAGTAGAGAAATTTCGTTTTCGTTACAAGTCGGAAATGCATGGAACACATGGTTCTTTAAATGGTACAAACTCgcaaagaaatacaaaaactttTCCTGAAGTTGAACTGTGTGGTTACAAAGGTCCAGCTATCATACGTTGCAGTCTCTTTCAAACAAACCTTGAAAGTCCACATTCACATCAGTTGGTGGTGCGAAAAGATGACCATGATATATGTGATCCACATGAGTTAAAAGTCTCTCAAGAAGTTGGCTACTTtgccgaatttaaaaatatgggtATTATACATACAGCCAAGAAATTTATTGTCGACGAGTTACTAAAAAAGAAACGTAATCGTTTGGGTCATGACAATTTGACAACTAAGGAAGATCAAGAGCTACATAAGCAAACGGAAAAGGAAGCGAAGGATATGAATTTAAATCAAgtACGTCTGTGCTTTGAAGCATATCGTGTCGAAGAAAATAAATCATACACACCTATAGCTGCCCCAGTTTATTCAAATCCAATTAACAATCGCAAGTCAGCACAGACTGGAGAACTACGTATTGTCCGCTTGAGCATAGCTACTGGAAATGTTAGTGGCGGCGATGATCTGATGCTATTGGTAGAAAAAGTTAGCAAAAAGAACATTAAAGTAAGATTCTTCGAAATGGTTGATGATGAACAAGTATGGGAAGCATTTGCACATTTTCGCGAATCCGATGTTCATCATCAATACGCAATTGTCTGCAGAACACCACCATATAAAGATAAAGATATTGACAAAGCTGTTGAGGTGTTTATAGAACTTGTAAGGCCCTCGGACGATGAACGCAGCTATCCACCCGTATCATTTCGCTATAAGCCGAATCCCGCAATATCACGTAAACGCAGAAGAACATGTTCATCTTTTAATAGTGGTTCTCTGAGTAATTCTGGTTCATTAAGCTCAGGCGAAATACCAAAAACAGTTCAAGAACAACAACGAAGTTCGATGAATATTGATTGTACTtcaaatgaacttaatttattattaaaaagtacAGATTTGTATAATTCTGAAATAGGAGTCGACTCGgacttattaaaatatcttgaGAATCCAGAGTATGGCGATTTGGATAAACACTTTATAGATGGTGAAACTGAAGCTAATCGTATAGAAAAAGATGGTGTTTCTATGGGCAGTGATGCAAAGAAATctctttttcattttaaaaagcaaatgattagcaaaaaacaaatggATGTGGCTAATCAAGGCCTAAAGCCTCAATctccaaatttatatttacaacgtattttaaacatttttcaggaTACGATTAGAGCAGGAACACCACTTAATCCGATCAGAAGGGAGAGTGCTGCTGAACAAATAACCAAAATCATAAATGAACATTCGGAAAAATACCGAGATCCCTTAATACATGAGATCGTATTAGCCAATAACAATAAATTAGCtataccaatttttaaaatattggaatattttaagttaaatgaaCTTTTAAATACAGTTCTAAATAAGCATACACAAACAGCATTACATTACGCCAGTCTGTATGGTCAGCAGAACTATATACGACCCCTTTTAAAATTGGGCTGCAATCCCAATTTACAAGATAATGATGGTAATACAGCACTCCATATTGCAGTGGCTGAGAAAAACTTGAAATGCttagaaagctttataaattcgGAAATGCCCTTAAATTTAAACCATCTAAACGACGATGGATTCACAGCCTTACATTTAGGCATACGTGATAACAATTACGATATTGTGGCAAAACTACTCAAATTTGATGCAAACACAGTAGCCACGGCTAGCAGTAAAGATGGCAGTAATGCTTTACATATGGCcgtacaacaacaaaatctaaaaatggtaaatttaatATTAGATACCCCTCTAATAGTTGCAGCATTACACGCCACCAACAGAGCTGGTTATACACCTCTGGATTTGGCCAAACAATTGGTAACGAGTGATAAACagggaaaacaaattttgactgTCCTGCTTACTTATTACAACAAATATCCATCTccagaaaaaacacaaaaaatggaAGACGATGATGATAAAACGCATCATAAtcttattattaaagaagaagaagaaaattcatttattataaaagaattgATTATTAAAGAAGAAGAGAATTCATGTTCATCTACCGAAGAGGACGAAGAGGATAACAGCAGTGGTTTCATTACTTGCGCGACAGTATCACCTAGTATTTCGCAAACTAAAACTATAAACGAATTTGAATTGAAACAAGAACTACCCGACGACAGTACGATTAATATGCTCAACATAAACGACTTGAAAATGGCTTTAAATGATAAAGAAATCGTATCAAAACTCTGTGCGAAACTAAATAAGAACGAAAACTGGAAGAAATTAGCAAAAGATATAGATTTGCCAACtttctatttaacaaacgtAGAAGCATTTCTCAATTCATTAAAACggaatttaacaacaatatGCTATACGCAATTTACGTTAGGACTTGAAAGAatcgataaaaatttaattaaaatcataaagaaaaaaaattaa
- Protein Sequence
- MDNMMPYFSATNDKDITDLDTLKRIRRVSECSMGSTSGYNSTTSPGPDNSPNSNHYSPVQSPDSVLQAEFSQLVLPTISYQQNSPQYLQLQNVQHMNVNNIISNNNQSMYYQQNNMNFSPHLNFGNPINYQLPLHSSAAVEPTTMPYKEVKYEYEATLRITEQPVEKFRFRYKSEMHGTHGSLNGTNSQRNTKTFPEVELCGYKGPAIIRCSLFQTNLESPHSHQLVVRKDDHDICDPHELKVSQEVGYFAEFKNMGIIHTAKKFIVDELLKKKRNRLGHDNLTTKEDQELHKQTEKEAKDMNLNQVRLCFEAYRVEENKSYTPIAAPVYSNPINNRKSAQTGELRIVRLSIATGNVSGGDDLMLLVEKVSKKNIKVRFFEMVDDEQVWEAFAHFRESDVHHQYAIVCRTPPYKDKDIDKAVEVFIELVRPSDDERSYPPVSFRYKPNPAISRKRRRTCSSFNSGSLSNSGSLSSGEIPKTVQEQQRSSMNIDCTSNELNLLLKSTDLYNSEIGVDSDLLKYLENPEYGDLDKHFIDGETEANRIEKDGVSMGSDAKKSLFHFKKQMISKKQMDVANQGLKPQSPNLYLQRILNIFQDTIRAGTPLNPIRRESAAEQITKIINEHSEKYRDPLIHEIVLANNNKLAIPIFKILEYFKLNELLNTVLNKHTQTALHYASLYGQQNYIRPLLKLGCNPNLQDNDGNTALHIAVAEKNLKCLESFINSEMPLNLNHLNDDGFTALHLGIRDNNYDIVAKLLKFDANTVATASSKDGSNALHMAVQQQNLKMVNLILDTPLIVAALHATNRAGYTPLDLAKQLVTSDKQGKQILTVLLTYYNKYPSPEKTQKMEDDDDKTHHNLIIKEEEENSFIIKELIIKEEENSCSSTEEDEEDNSSGFITCATVSPSISQTKTINEFELKQELPDDSTINMLNINDLKMALNDKEIVSKLCAKLNKNENWKKLAKDIDLPTFYLTNVEAFLNSLKRNLTTICYTQFTLGLERIDKNLIKIIKKKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01236429;
- 90% Identity
- iTF_01236429;
- 80% Identity
- -