Basic Information

Insect: Pollenia griseotomentosa
Gene Symbol: -
Assembly: GCA_963931875.1
Location: OZ007564.1:118143968-118159013[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00086 0.14 14.4 1.2 1 23 120 142 120 142 0.98

2 14 3.8e-06 0.00063 21.8 0.7 2 23 381 402 380 402 0.97

3 14 1.4 2.3e+02 4.3 0.2 1 23 453 476 453 476 0.93

4 14 4.9 8.1e+02 2.6 2.8 2 23 539 560 538 560 0.93

5 14 0.009 1.5 11.2 2.8 2 23 739 760 738 760 0.96

6 14 0.86 1.4e+02 5.0 3.5 1 23 766 789 766 789 0.96

7 14 0.98 1.6e+02 4.8 0.5 2 23 824 846 823 846 0.95

8 14 0.0025 0.41 13.0 1.0 1 23 854 877 854 877 0.96

9 14 0.4 67 6.0 2.6 1 21 1017 1037 1017 1038 0.94

10 14 0.027 4.6 9.7 8.5 1 23 1055 1077 1055 1077 0.98

11 14 0.00018 0.03 16.5 0.3 1 23 1082 1104 1082 1104 0.94

12 14 0.0033 0.54 12.6 7.4 1 23 1110 1133 1110 1133 0.94

13 14 0.012 1.9 10.8 0.7 2 20 1139 1159 1138 1162 0.87

14 14 0.49 82 5.7 4.3 1 19 1168 1186 1168 1191 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00086	0.14	14.4	1.2	1	23	120	142	120	142	0.98
2	14	3.8e-06	0.00063	21.8	0.7	2	23	381	402	380	402	0.97
3	14	1.4	2.3e+02	4.3	0.2	1	23	453	476	453	476	0.93
4	14	4.9	8.1e+02	2.6	2.8	2	23	539	560	538	560	0.93
5	14	0.009	1.5	11.2	2.8	2	23	739	760	738	760	0.96
6	14	0.86	1.4e+02	5.0	3.5	1	23	766	789	766	789	0.96
7	14	0.98	1.6e+02	4.8	0.5	2	23	824	846	823	846	0.95
8	14	0.0025	0.41	13.0	1.0	1	23	854	877	854	877	0.96
9	14	0.4	67	6.0	2.6	1	21	1017	1037	1017	1038	0.94
10	14	0.027	4.6	9.7	8.5	1	23	1055	1077	1055	1077	0.98
11	14	0.00018	0.03	16.5	0.3	1	23	1082	1104	1082	1104	0.94
12	14	0.0033	0.54	12.6	7.4	1	23	1110	1133	1110	1133	0.94
13	14	0.012	1.9	10.8	0.7	2	20	1139	1159	1138	1162	0.87
14	14	0.49	82	5.7	4.3	1	19	1168	1186	1168	1191	0.92

Sequence Information

Coding Sequence: ATGGACGACAAGAAATCCGTACAGGAATACGCCATGGTGTGCCGGACATGTCTGCAGTCGAATGAGGAAATGATTCATTTAAGCGCATTTGTTAATGATAACATTCAAGAAGATACAACAATGATTTCTTACATGGAATGCTTAAAAGTGTGTATAAAATTTGAGGAGACTATGGATATTGGAATGCcacagaaaatttgtttcaaatgtgCCTCTGCTTTGCAAGTGTCATATTGGTTTATGAAAAATGCCAGCCAAGCCCAGGATTTGTTAAAACAGAAATTAACAGAGATAAGACGAAAAAAAGAACAAACTGAAAAGGAGattgcagcagaggaaattagaaagCCTAAAAGGTTTCGTTGCAAAATTTGCAATGAAAAAGTAGAAACAAAGAGATCTCTTAAAGATCATGTTAAGCTTCATTTGGATATTATTGTGTATAGTTGCCAATTATGTTCCTTTGAATGTCATAATCGAAATAACTTATGTGATCATTATATACAAATCCATGACGTGGAAGCTACAAAGGAACAGCTAaaaccaaaaactaaaatatcatCATCATCTGACATTACTACCCATGACCTCTTAGAAGGTGCCATAAAGAACGAACATTTCCAACTATTACCCGAAAATGCGGAACATACTTCATTTGAAACTGAAACAAAGCCAAACCTGATAACAAATACGACAAGCAGTAGTGAGCCTTTTCAAGTATCCACGATAATTACAACTAATCCAAATTACACCACATTATCTGCCCCTTTTACTGTATTGGAAGGTGAACTTAACAATGTCTCAAATAATGATCTTAGTATAGCCAATGAATTTATGGTCATGGCTGATGGCAGTTTAGAAAAAGTCTTGAACAAAGGTGTGGTTATAGAGTATATAGATGCGCCTAACAATTGCAACTTCACTTTAGACAATGGCTTAGTTTTAGACAACATAGTGCAGGTGCAAAATTTAGACAATACCGTCATGTTGGAATCTGGAAATGATATCGCACATATGGACGTTGATGATCTAATTATAGAAGATTCCGGCGATATTGTAGAAGAAACTCAAGGCTCTATCATTCTTCCTCTTGAAGAGGAAACAATACCAGCCAACTTTATTGAACAGCCTAAAAAGGTTATGTGTAAAATTTGTACCAAAGATTTTATAACacaagaacaattaaaaaatcatatgTTAACGCACAATGaaatccCTCACTTTTTTTGTGATCAATGTGCGTTTtatacgttttttaaaattgatctACATCAACACTATAAGAGCAGACATAATCTTCAACCtacaaacaaacaattacaaccaaaaaacaaacaaaattctaTTAATGAAATTTACGCCTGTGATTTATGTTTCTATGAGGCAGAGGCAAAAGCAGAtctaaaaaaacattataaagcAAATCATAAAATTGAAACCAACGAAATACAGTTGAAGCCAACTAagaaagagaaaataaaatcaaaattatcaCCGCTGTCGGCCAAGGCAAAAGCAGCAGCAATATTGAATAAACCAACAAAATTAACAACATctacaaacacaaaattgccaTCTGTGAACGATTCAAGGCCAGATTATCCAAATGGTTTAAATTGCCGTAAGTGTCATGAAGTATTCTATTGGCGCAATAAATTATATGAACATTATAAGTTGCATAATGCTGAAGAAGCCGCTCTTAAACAAGAGAAACAACTGATTAAAGTTCAAAATAAACCTTCGTTTTCCACAAATctgtatcaaaataaaattaaaaccacAAAAACCCTGCCAGCTCAAACTCAGACAATTGCACAATCTCAAATTAAAACAACACCGAACACATCAACTTATTCTTGCTTGGACACGTTGGCCTTAAAAGCCTCAACATCCAACATTTCCACAACATTACATTCAATGGCGCCTCTAACACCATCGTCCAGCTCAACTTATACCTTGCCGTCGGATGCCATACCGCAAATTGTAGAAACCGATCAAACCATTGAAAATGTTATGGATTTCGATTTTAATTGTGATGATGACGCCTTGTTCGAAGACTTTGATGCAAATGTAGATGTTGAGAACGACTCCGATGATAATGATAGCGAATTTCGTAATGTTTTGCTGACATCCGATGATGATTTTGAAGATATCTTGCAGGAAGACAGTGGTAAGAATGCTAATTGCAAAACCAGCACTAACACAACCGAATCGTATTGTGCCCATTGTCAAAAGACATTCTTAAGCCAATATCAGTTTGAAAATCATATGTTTGTTCATAGAGGTCTCGCTCCTTATCGTTGCGAATTGTGTACAAATCTGTACAATAAAAAACGTTGTTTAATACGTCACTATAAAGCAGTACATAAAAATGTACCTACTCGTGATATGATTCAAGCTAAAGGCGACAAAGTCTGTGACGATAAAACTCCTTTAGAACTTTTAAAACTAGAAGCAACAACTTGTCTAATGTGTGCTAAATGTCCTTATGAATCCTCTGAATTACATAATATCAAAGTTCATTTAAATTCTAGTCATAATATTTACGATGaaCTTCCGTTTGAATGTCCGCGTTGTATACGTTCATTTGCAAATAAAACGAAACTTTCTAGACATTTAGAACGCAATCACAGTTTGACACCAATTAATCAGCATCAAATTCTTTTCGATAGTGCAGAGAATATATCAGCCTCAGTAGCAACAAGCACATCAGTAACATTAATTACAACAACagtaaataataatgtaaatatgaTGAAAACAGAAACTAGTGAAACAAACGCAAGTTGCGAATACAATGATATATtcaaaaaagaacaacaacaacaatataatTGTCCAGCCGCAACAGGACAGAAACTATTATTTGAAGATGCCATAGCAATCGATATTATGATCCCATCCGAAGTATCCAGGAGCCAAACAACATATTTGGCTTATAACGAAACCTCTACCAACAGCAACAACTCCTCCCTTATCAAAATACCTTCAAGCACAGACTTGCCTACATCAACAGCCCTAGATGCGAATAATTTGGAACAGCCACTgttcaaatgtaaaatttgcCTTTTAACTTGTTACAATCTCGCTTCATTTAATAAACACGGTAAACGCATAGACTGCCGTAAACTCAGTGTTAGCAGTTTGGGGGACAGAATGCTTTTCGAGTGTGAAATATGTCACTGTAATTATAAGACCATGTATTTGTTAAAACACCATCTAAAACGACACATAGGAAGAAAGTTTTTGTGCGCCGAATGCCCCAAATCATTTATAAACAAGGTGGAATTGGAAGCCCACAAACATGTGCACAGCGGAGAGAGACCGCACAAATGTGATGTGTGTACAAAGTCGTTTCGTTATATCCATCATTTGAAACGTCACAAGGACAGTGTGCATTTTGGTAAACGTCACGCCTGTACCGAACCCAATTGCAATCGTAAATTTACCACTCTGGCTCAACTTAAGGTGCATGTATGGACACACAATGGTATTGTACCATATAAGTGTCCCTTTTGTAACCGCTTATTTAAAAAGAGATTGCTGCTTCGTGaacattgttataaaattcataaaattaatttaagtgaAGAGGAAATGGCTGAAATATTTCGCAATAGTTTGGGCTATACAAATCCTCATGATTTTACGGTAACTATTGGCAATGGCAAAATGTTGCGACGTGGCGACTTAGAAACTATGGGTGCATCTGGCGTTATAAGATCTTCATTCAAATAG
Protein Sequence: MDDKKSVQEYAMVCRTCLQSNEEMIHLSAFVNDNIQEDTTMISYMECLKVCIKFEETMDIGMPQKICFKCASALQVSYWFMKNASQAQDLLKQKLTEIRRKKEQTEKEIAAEEIRKPKRFRCKICNEKVETKRSLKDHVKLHLDIIVYSCQLCSFECHNRNNLCDHYIQIHDVEATKEQLKPKTKISSSSDITTHDLLEGAIKNEHFQLLPENAEHTSFETETKPNLITNTTSSSEPFQVSTIITTNPNYTTLSAPFTVLEGELNNVSNNDLSIANEFMVMADGSLEKVLNKGVVIEYIDAPNNCNFTLDNGLVLDNIVQVQNLDNTVMLESGNDIAHMDVDDLIIEDSGDIVEETQGSIILPLEEETIPANFIEQPKKVMCKICTKDFITQEQLKNHMLTHNEIPHFFCDQCAFYTFFKIDLHQHYKSRHNLQPTNKQLQPKNKQNSINEIYACDLCFYEAEAKADLKKHYKANHKIETNEIQLKPTKKEKIKSKLSPLSAKAKAAAILNKPTKLTTSTNTKLPSVNDSRPDYPNGLNCRKCHEVFYWRNKLYEHYKLHNAEEAALKQEKQLIKVQNKPSFSTNLYQNKIKTTKTLPAQTQTIAQSQIKTTPNTSTYSCLDTLALKASTSNISTTLHSMAPLTPSSSSTYTLPSDAIPQIVETDQTIENVMDFDFNCDDDALFEDFDANVDVENDSDDNDSEFRNVLLTSDDDFEDILQEDSGKNANCKTSTNTTESYCAHCQKTFLSQYQFENHMFVHRGLAPYRCELCTNLYNKKRCLIRHYKAVHKNVPTRDMIQAKGDKVCDDKTPLELLKLEATTCLMCAKCPYESSELHNIKVHLNSSHNIYDELPFECPRCIRSFANKTKLSRHLERNHSLTPINQHQILFDSAENISASVATSTSVTLITTTVNNNVNMMKTETSETNASCEYNDIFKKEQQQQYNCPAATGQKLLFEDAIAIDIMIPSEVSRSQTTYLAYNETSTNSNNSSLIKIPSSTDLPTSTALDANNLEQPLFKCKICLLTCYNLASFNKHGKRIDCRKLSVSSLGDRMLFECEICHCNYKTMYLLKHHLKRHIGRKFLCAECPKSFINKVELEAHKHVHSGERPHKCDVCTKSFRYIHHLKRHKDSVHFGKRHACTEPNCNRKFTTLAQLKVHVWTHNGIVPYKCPFCNRLFKKRLLLREHCYKIHKINLSEEEMAEIFRNSLGYTNPHDFTVTIGNGKMLRRGDLETMGASGVIRSSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236188;
90% Identity: iTF_01236188;
80% Identity: -