Pgri037178.1
Basic Information
- Insect
- Pollenia griseotomentosa
- Gene Symbol
- Nfat5_1
- Assembly
- GCA_963931875.1
- Location
- OZ007563.1:12732224-12739118[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.51 8.2e+03 -1.6 0.3 62 89 92 120 87 173 0.63 2 3 9.2e-36 1.5e-31 111.5 1.1 1 168 218 377 218 378 0.96 3 3 1.6 2.6e+04 -3.2 0.0 47 67 480 500 473 508 0.80
Sequence Information
- Coding Sequence
- ATGCGCACAACTTATGAACAAGATACACACATATCAAAATGTTGGGCAAAATCCATGCACAAATCTAGGCATGCTAAAAAATTACCATTTTTAAATGATGACACTGAAAATACCGAATCTGAAGATGAAGATTTCTGTACCGATGATTCCGATGACAATTATGGTGGACGACATCGCAAAAATCTCAAAATTTCCAATCAACAAATCTTATCATCCTCCTCTTCATCATCTTCGTCGTGTTCGTCGTCTTCACCCCATTCTGATAAATATAACCATCACCAAAATCACAATCATCATCACACGGGACATGGCATAAAACGTAAAAAGATTGAAACCATTGAGGTTGATTTGGATAATGATGATGCTTGCAGTGAAGATGCATTCATACGTAAAAtagccagtgttgccagtaCAAATGTGTCGGCTGAAAGTGTCGCAACAGCTTCAACAGCGAATATTTCTGTTGTTAACACTCGACCGGCACAGCTTCAGTTACAGGCACATCCACACAGCTCCTCCCTAGTCGCTGGGCCGCCAGCAACCACAAAaTTTATTGCCGCCAGTGCTAGGAGTATGGCCAGAGTGGCTCACAAAAGGCAACCGGCAACTCCGGCTAATAGTGTGGCCACTTCCTCAAATGGTCGCATACAGTTAGAAATTGTTTCACAACCAGAACAACAACACAGAGCTAgATACCAAACTGAGGGTAGCAGAGGTGCTGTTAAAGATCGTAGTGGCAATGGTTTTCCTATTGTTAGATTAGTTGGCTACAGCAAAGCCACTACATTACAAGTATTCATAGGCACCGATATTGGCCGTGTTGCTCCACATATGTTTTATCAAGCCTGCAAAGTGGCTGGCAAAAATTCCACACAATGCAATGAAAAGAAAGTCGATGGCACGGTAGTTATTGAAATTGACTTTAAGCCCGATCAAGATATGACAATAACATGTGATTGTGTGGGAATTTTAAAGGAACGCAATGTCGATGTTGAACATCGTTTTCCCGAACATCTTGCACAGAAGAATAAAAAGAAATCAACACGGTGTCGCATGGTATTTCGTACACAATTAGCACATGATGATGGTATCGTCGAAACATTACAAGTCTGTTCCAATCCCATTATATgcaCCCAACCACCGGGTGTACcagaaatatgtaaaaaatccCTCAACTCTTGCCCAGTAGATGGTGGTCTGGAATTATTTATAATTGGTAAAAATTTTCTCAAAGATACACATGTGATATTTCAAGAAACCTACGAAAGTGTCAATGACAACATTGGCGATGATAATCTCAAGACAACAGCAGCCACAGCGATTGATATGCCTGTTATTGGAGGAGCACTATGGGAACAAACAGTGTTGCCCGATAAGGAATATTTACAGCAAaCCCATTTAATATGCACTGTGCCACCGTATATAcatcaaaatatattaaaacctGTCACCGTACAAGTGGCGATTATTTCGAGCGGTAAAAAAAGTGAACCCCATACATTTGTTTATACGCCAAAGGGCACTTATACACCACTAGCGGCTGCAACTACGCTATGTAGTACAAATACAACACACAGTAGCTTATCATCGCCCCaagAAGGTCCGAAACTTAAAATTGTCTTCTCTATGATACAACAAAAACCGGCTTTGCTAACTAAAgcgtttttgcaaaaaaatttctcCTCCACGGTATATATACAAATACCAGCTTCGGGTTTTGAGATTCAGAATTCTGAAAttcaagattaa
- Protein Sequence
- MRTTYEQDTHISKCWAKSMHKSRHAKKLPFLNDDTENTESEDEDFCTDDSDDNYGGRHRKNLKISNQQILSSSSSSSSSCSSSSPHSDKYNHHQNHNHHHTGHGIKRKKIETIEVDLDNDDACSEDAFIRKIASVASTNVSAESVATASTANISVVNTRPAQLQLQAHPHSSSLVAGPPATTKFIAASARSMARVAHKRQPATPANSVATSSNGRIQLEIVSQPEQQHRARYQTEGSRGAVKDRSGNGFPIVRLVGYSKATTLQVFIGTDIGRVAPHMFYQACKVAGKNSTQCNEKKVDGTVVIEIDFKPDQDMTITCDCVGILKERNVDVEHRFPEHLAQKNKKKSTRCRMVFRTQLAHDDGIVETLQVCSNPIICTQPPGVPEICKKSLNSCPVDGGLELFIIGKNFLKDTHVIFQETYESVNDNIGDDNLKTTAATAIDMPVIGGALWEQTVLPDKEYLQQTHLICTVPPYIHQNILKPVTVQVAIISSGKKSEPHTFVYTPKGTYTPLAAATTLCSTNTTHSSLSSPQEGPKLKIVFSMIQQKPALLTKAFLQKNFSSTVYIQIPASGFEIQNSEIQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -