Basic Information

Insect: Pollenia amentaria
Gene Symbol: L
Assembly: GCA_943735935.1
Location: CALSEV010000037.1:985905-1008277[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.4e-06 0.00096 20.7 1.7 1 23 215 237 215 237 0.98

2 19 0.7 80 5.2 5.8 1 23 243 265 243 265 0.98

3 19 3.7e-07 4.2e-05 25.0 3.1 1 23 271 293 271 293 0.99

4 19 1.7e-05 0.0019 19.8 0.3 1 23 299 321 299 321 0.98

5 19 5.8 6.5e+02 2.4 0.7 2 23 386 409 385 409 0.84

6 19 0.0045 0.51 12.1 0.2 2 23 436 458 435 458 0.96

7 19 0.044 5 9.0 0.7 1 23 558 580 558 580 0.97

8 19 0.16 18 7.3 2.0 2 23 588 609 587 609 0.96

9 19 0.00077 0.087 14.5 0.4 1 23 617 641 617 641 0.93

10 19 0.35 39 6.2 0.1 1 19 646 664 646 666 0.93

11 19 4.5 5.1e+02 2.7 0.4 3 23 678 699 676 699 0.84

12 19 0.0022 0.25 13.1 2.9 1 23 738 760 738 761 0.96

13 19 4.8 5.4e+02 2.6 0.9 1 23 930 954 930 954 0.89

14 19 0.0013 0.15 13.8 4.8 2 23 963 985 962 985 0.97

15 19 0.19 21 7.0 0.1 1 23 991 1013 991 1013 0.92

16 19 0.047 5.3 8.9 1.0 2 23 1021 1042 1021 1042 0.96

17 19 0.94 1.1e+02 4.8 0.9 2 23 1132 1153 1132 1153 0.94

18 19 0.0027 0.3 12.8 0.0 1 23 1163 1185 1163 1185 0.97

19 19 0.033 3.8 9.4 0.7 1 23 1192 1214 1192 1214 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.4e-06	0.00096	20.7	1.7	1	23	215	237	215	237	0.98
2	19	0.7	80	5.2	5.8	1	23	243	265	243	265	0.98
3	19	3.7e-07	4.2e-05	25.0	3.1	1	23	271	293	271	293	0.99
4	19	1.7e-05	0.0019	19.8	0.3	1	23	299	321	299	321	0.98
5	19	5.8	6.5e+02	2.4	0.7	2	23	386	409	385	409	0.84
6	19	0.0045	0.51	12.1	0.2	2	23	436	458	435	458	0.96
7	19	0.044	5	9.0	0.7	1	23	558	580	558	580	0.97
8	19	0.16	18	7.3	2.0	2	23	588	609	587	609	0.96
9	19	0.00077	0.087	14.5	0.4	1	23	617	641	617	641	0.93
10	19	0.35	39	6.2	0.1	1	19	646	664	646	666	0.93
11	19	4.5	5.1e+02	2.7	0.4	3	23	678	699	676	699	0.84
12	19	0.0022	0.25	13.1	2.9	1	23	738	760	738	761	0.96
13	19	4.8	5.4e+02	2.6	0.9	1	23	930	954	930	954	0.89
14	19	0.0013	0.15	13.8	4.8	2	23	963	985	962	985	0.97
15	19	0.19	21	7.0	0.1	1	23	991	1013	991	1013	0.92
16	19	0.047	5.3	8.9	1.0	2	23	1021	1042	1021	1042	0.96
17	19	0.94	1.1e+02	4.8	0.9	2	23	1132	1153	1132	1153	0.94
18	19	0.0027	0.3	12.8	0.0	1	23	1163	1185	1163	1185	0.97
19	19	0.033	3.8	9.4	0.7	1	23	1192	1214	1192	1214	0.93

Sequence Information

Coding Sequence: ATGTACTCGACACATACATCTTCAAGTTACTCACCTTCAATATCAGATGGTACTATAACACCAAATTCCCTACATCAGCATCATCATCATCACCACCATCAGCATTTAGCTGTGCCACCACATTTACCATTCCCCAATTCGGCTGCTTATGAAGAAGACACAACGTTAGCTGTACAGACACAACGTCTGCAAAGACAAAAAACTAATGGCACCTTGGATGGCGCTGACTATGAAGACAACGCGAATGACAATGACAACGACAACGACCAAAACAACGAAAGGATTCACAAAAATGATACAAAATTGTGTAAAGACAACGACACAATTGTTGCAGACAGTAAGACAACCGCAAATATTCCTGAAAGTGGCGAAGAACATCATCAACATCCACAGCAGCAAACACAGCAACATCATCAACTTAAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATTCCTTCAAAATTACGTAAAATCGATAGGGATACAACGACGGTGGGTAATGGTTCTAGTGCCATTGCCGTTGGTAGTGGTGGCACTCTTACAGCAAATGCAGTCAAGTTTGATAAGTTGACAGGAGATGGCATTAAAAGTGGTAACAATGCTGCCGGTGCTAGTGCCGACGGATCCTATCAATGTCAATTCTGTGATAAATCATTTCCGCGTCTTGGTTATTTGAAAAAACATGAGCAGAGCCATGCTGAACACTTGCCTTTTAAATGTGATTACTGTGCTCGACTCTTTAAGCACAAACGTTCCCGTGATCGTCATACTAAATTGCATACAGGCGATCGTCGTTACCGCTGCCCTCATTGCGAAGCGGCCTTTTCAAGAAGCGATCATTTAAAGATCCATATGAAAACCCATGATAACCAAAAACCATTTCAATGTACTATATGCAATCGGGGCTACAATACCGCCGCAGCTCTCACATCTCACATGCAAAATCATAAGAAGCAAGCTGCTCTTTTGGCTGCTGGTGGAAATCCGCAAGCTATCAATTACAGCCCACGTTCTACAGGCTCAGCTTCTAGCAATGGCAGTTTGCAAAAGAGGCGTTATGGTTTAGCCGGAGCACCAGAACAGAGCCCCAATCGCCTTGATTATCCAAAACGTGGTCGTTCATCATCGTCAAATGTGCTAAAGTGCACATTTTGTTCAAAGTCCGATTTTACTGCAGTGGAACAGCTAAACAGTCATCTTCAAACTCAGCACGAAAAAGAGTTGGCACATTCTATGACACCTCCGGCCATAAACAATCATCAAGCAGTTGATAATCATACACTCCAACTATCTTGTGAATACTGCACAATGAAATTTCCCAGCATCGCTGCCATGTTTCAGCATATGCGTTCAGCCCATTTAGATCGTTTAACCAGTCCCAATTCATACTTTGAACATTTTAATCGTTTAGCTGCCTCAGGTACTTTTAGTCCCCGCTTGTTAACTGGACCACCTCTGAGAAGTACGGCTAGTGCGGAGGAAAACAACATAAAAGAGGAAAACAATTTATCCAGCCCCAAATCAGTAGAAGCTTTGACACGACAAAGTGAAGATGAACCAACAGATCTTAGCCGAAATCGTAGATCAATGACACCTACAAATACTCCACAGAATTCTCCACAGGAAAATTTTCCTACCACCGAAAAGCCAGGTTTATTTTTCTGCAACCAGTGCAATGCTGGTTTACCCGACTTTGAGTCCTTCCGCAATCATTTAAAGACCCATATTGCCCAGGGTTTGAATTTGGTATGTCATCATTGTGGGTTGTTACTAAGGGAACATGCTGAGTATGAAAGACATATTATATCACATTTTCTCATTACAAATTCAGAGTACAATTGTTCGGGAAATTGTCAAAAGTCTTTTGGAAAACCAGAGGAATTGCAAAAGCATCTATTAGATCAACATGCTATAACCATGTTTAAATGTGGTCTTTGCAGTGAAATGTTTGAATCGAAAGTTGCCATACAAGTACATTTCGCTTGTACACACTCGGCTGAAACTAAAATCCTAAGATGTTCGGCCTGTATGGATGTATTCAGAACGGAAGCAGATTTTAACTTGCACGTAAAAACACGCCACCAAGCTATTAACAATACGCCTGCTCCTGTTAATTCTTTGCAGTGCATGTTTTGTCGTACGGTTTGTTCCTCAGACTTGGAAATGCAATTTCATTTGGCAGCTCATGCCAGACAGTTTCGTTGTCCTTCTTGTCCGGAAACTTTTCATGTTGAATTTTTGCTTGATAGACATATGCAAACACATCATGGGGGCTTAGAGCGACCTCCACCACCTCCCCTACAACAAAATACGGCAGAAGAACACACATCTCCCGTGCCTCATCCAAATACTATTTCACCTATGAACTCTCTGTATGTAAATGCTCTTTTTGGTAAATCTCCATTAATGCCATTGGCGCCACAGAACAACAACAGTAGCATTCTAGATTATAACATGGCATTTGCCTCTCACCTTAACAAGGGTCTATTTCCTAATACGGCTCCCAACAAATTCTACAATCCTCTCCAAATTGACACAAATGCCATGAAACATTCAGCCTTAATGTACGGTTTGTCACAAAGATATTTTGACACCAATCGCACTGTCATGGAAATGTATCAACAGCAGCAGCAGCAACAACAACAACAACAGCATCAGGATAGTAACAAACCACAAGGAAATTATTTTATAAGTCCCAAACAACCAACTTCGGGAGCTCATGATGTTCATCTTGGAACAGCTTTGCCCACCTCGCCAATAAACAATACTGGTTTCAGTTGTGGAATTTGTGAGCGAAATGATTTCCGCACCGAGTCTGAAGTTCATTCACATCGCAAGATTGTACACAATCTAAAGACCGGAGTCAGCTTAAAATGCGCCTATTGTTCGGGCAACTTCAAATCACGCAGTGAGTTGGAACACCATATGAAAACCTGTCATAACTCAACAGGAAAACACAAGTGTTTGATATGTGATGAGATTTTTCCTTCACCCGCCATTTTGGCCGAACACAAATTACAACATTCCAAAGTAGGACAATCGGGAAGATGTTCCCATTGTTCGAAGGCATTAGCTGATGTAAGTGCTTTTAAAACTCATTTATCCGAACACAATACAGAAGGTCAAATGCCAGTGCAGTGTATATGTTGTCGTCAGACTTTACATTCCGAGTTCGAGATTGGTCTGCATGCAAAATTCCATGTTAAAAATTCCACTGTTCAGGAAAATGTTTGTGCTCTCTGCCTTGAGGCTATCACAAGTTTGCCCACTGAGGCCAAGGTCTGCGAGAAATGCTGCCGTAAACATAATCTTAATGCTAAATTCAAGCAACGTGACCATTTTGAACGTCCCGTCGAACTAAGGCAGTACATTGAAAATCGTTGCAATCTTTGCAAAATGATTTTGCCACACTCTCAAAAACTTCAAGAGCACTTGGTTGAACACACCTTCGCCGGTTGCGAGGATCGTGGATTTAACTGTTACATCTGTTCGGCTGTTTTCACTGCACCCAGTGGTCTGCTAAATCATATGCTCGAGCATGGTGCCAACTCAAAGCCCTACGATTGCAATTTATGTCCAGAGAAGTTCTACTTCCGTGCTGAATTAGATCATCATCTAGTCGATCACGATTTAAGAGAACTACCGGCGGCAGTTAAAAATGAGCAAGAGCATTCGGTTAATAAAAAGGAACCTTTAAATAGTATGAAACCAGAAAAACCTGTCGAAGGATTAAACGATGTTAAACAAGAAGTAATTGAAACGGATCATAATTTCAACAATGCTGAAGAGGATGAATATATTGAAGTAGAGAAAGTTAATGAAAATAATAACAATATTAACAACAATCAATTGGACGAAACAGTATCGGATAAAAGAGAAGAAACTAAAGATATTCTAAATGAACATCTCAGAGATGAGAAGGCCTAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLHQHHHHHHHQHLAVPPHLPFPNSAAYEEDTTLAVQTQRLQRQKTNGTLDGADYEDNANDNDNDNDQNNERIHKNDTKLCKDNDTIVADSKTTANIPESGEEHHQHPQQQTQQHHQLKRHGRHHRYAEHALRIPSKLRKIDRDTTTVGNGSSAIAVGSGGTLTANAVKFDKLTGDGIKSGNNAAGASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQAINYSPRSTGSASSNGSLQKRRYGLAGAPEQSPNRLDYPKRGRSSSSNVLKCTFCSKSDFTAVEQLNSHLQTQHEKELAHSMTPPAINNHQAVDNHTLQLSCEYCTMKFPSIAAMFQHMRSAHLDRLTSPNSYFEHFNRLAASGTFSPRLLTGPPLRSTASAEENNIKEENNLSSPKSVEALTRQSEDEPTDLSRNRRSMTPTNTPQNSPQENFPTTEKPGLFFCNQCNAGLPDFESFRNHLKTHIAQGLNLVCHHCGLLLREHAEYERHIISHFLITNSEYNCSGNCQKSFGKPEELQKHLLDQHAITMFKCGLCSEMFESKVAIQVHFACTHSAETKILRCSACMDVFRTEADFNLHVKTRHQAINNTPAPVNSLQCMFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGGLERPPPPPLQQNTAEEHTSPVPHPNTISPMNSLYVNALFGKSPLMPLAPQNNNSSILDYNMAFASHLNKGLFPNTAPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQQQQQQQQHQDSNKPQGNYFISPKQPTSGAHDVHLGTALPTSPINNTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKALADVSAFKTHLSEHNTEGQMPVQCICCRQTLHSEFEIGLHAKFHVKNSTVQENVCALCLEAITSLPTEAKVCEKCCRKHNLNAKFKQRDHFERPVELRQYIENRCNLCKMILPHSQKLQEHLVEHTFAGCEDRGFNCYICSAVFTAPSGLLNHMLEHGANSKPYDCNLCPEKFYFRAELDHHLVDHDLRELPAAVKNEQEHSVNKKEPLNSMKPEKPVEGLNDVKQEVIETDHNFNNAEEDEYIEVEKVNENNNNINNNQLDETVSDKREETKDILNEHLRDEKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: iTF_01194655;
80% Identity: -