Pame004870.1
Basic Information
- Insect
- Pollenia amentaria
- Gene Symbol
- dmd-4
- Assembly
- GCA_943735935.1
- Location
- CALSEV010000059.1:119226-137610[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-24 2.4e-20 73.4 11.7 1 47 49 95 49 95 0.98 2 2 0.54 4.8e+03 -1.2 0.7 23 32 333 342 331 346 0.75
Sequence Information
- Coding Sequence
- ATGGCCTCTTCAGTCACTACTACTACGGCCACAAAGGAATCTTCTACGGCCACAGTTTTGGTTGGAAAAAAATCACGCAAATCTTTAAAATCCTTTGGATCAGATGGTCCATCAAGCAAATCATCTTCTTTGTCTTCTACAAATCGTGTTCCGAAATGTGCCCGCTGTCGTAATCATGGCTGGATATCGGAGTTACGGGGCCATAAAAAACACTGCGCCTATAAGAATTGTCGTTGTGCAAAGTGTGTGCTGATTTTCGAGCGGCAAAGAATAATGGCGGCCCAGGTGGCCCTTAAGCGCCAACAGGCTGTTGAAGATGCGATTGCTCTGCGTTTAGTGGCCACTAAAACTGGCCAACAAATGGACAGTTTGCCTCCAGGCAATATATTTGATTTGGCTGAAAACCTGCAAGATATTAAGGCAAATACCAGCAGCCCTCTACAAGACACTGTTGAAGATTTAAGTTTGTCTGGCAAACAAGCGGAGTCTTTGACAAAAATTTCTCAAAATTCCAACGTTAATTTAGCCGAAACAACCACAACCTCAACAAATTCCTCCAACTCAACATTATCTGCTGCCACCACCACCACCACCAGTTGTCAGTCTTCTTTCAACGATGTTAAGGTGTCCCAAAATGCTATTGATATGTTGGTCCAGCTGTTTCCCCAACGCAAACGTGCTGTCTTGGAATTGATTTTAAAAAGATGTGATTCAGATTTGGTAAAAGCCATTGAAAATATATCTTCTTCCTATAAAGATCATCAGGGAGATTTTGAAAGACATTTGGAGCCGTCGGGTTCGAATGTAATGAAAAGCGCTTTTAAACCGGTTTATAGTTCAGCAAATATGCACTCCAAATCCTTAACGCTGGGAAACTCCTTATGTTCCACAACTACTGCATATCCAAAATGGTTTGTGCCCCTTACATTTCCCATAACATTCCAGGGACATTTGGCACCTGCCCTGCCACCATCATCTCTACCACCACTTACTTCACGTTGTACTTTGCCAAACTGTACATGCTTGGAAGGGTATCAATTTAATTGTTAA
- Protein Sequence
- MASSVTTTTATKESSTATVLVGKKSRKSLKSFGSDGPSSKSSSLSSTNRVPKCARCRNHGWISELRGHKKHCAYKNCRCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVATKTGQQMDSLPPGNIFDLAENLQDIKANTSSPLQDTVEDLSLSGKQAESLTKISQNSNVNLAETTTTSTNSSNSTLSAATTTTTSCQSSFNDVKVSQNAIDMLVQLFPQRKRAVLELILKRCDSDLVKAIENISSSYKDHQGDFERHLEPSGSNVMKSAFKPVYSSANMHSKSLTLGNSLCSTTTAYPKWFVPLTFPITFQGHLAPALPPSSLPPLTSRCTLPNCTCLEGYQFNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01236699; iTF_01237679;
- 90% Identity
- iTF_01236699; iTF_01237679;
- 80% Identity
- -