Pmer006734.1
Basic Information
- Insect
- Polistes metricus
- Gene Symbol
- dmrta2
- Assembly
- GCA_010416925.1
- Location
- QUOH01000002.1:7678114-7721230[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-27 8e-24 82.9 10.8 1 47 47 93 47 93 0.99 2 2 2.2 7.7e+03 -3.5 0.0 33 43 179 189 178 191 0.78
Sequence Information
- Coding Sequence
- ATGTCGTTGCCGCGAGGTGTCGGACTCGGCGTCGATGTCGGTCAATTGATGCAAcatcagcaacaacaacatcaTCAACAACAGCATCACGTATTACCGGCAGCTTTTTTTCTACGGGCCAGTGCCGAAAGATATCAGAGGACACCGAAGTGTGCTAGATGTCGTAATCACGGAGTCGTTTCCGCCCTTAAGGGACACAAGCGTTATTGTCGATGGAGGGACTGCGTGTGTGCGAAATGTACCCTTATCGCTGAGAGACAACGCGTCATGGCAGCTCAGGTCGCGTTAAGAAGACAACAGGCTCAAGAAGAGAGCGAAGCACGTGAACTTGGATTACAATTACAATACAATACCGGTAGTTGCACTGGTACACCGGTATTGTCAGGATCAGCCACAGCAACGACACCAACCGATAGTCCATCACCGCATCCGGTCCACGTAACGAATCCGACGGGCTTGGCTATTCCAGCAGCGGCCGCGGCTGCTGCTGCAGCTGCTGCAGCGGCACATATTCAAACGCAATTGACACAACCTGAATGTGGTATGATACAACGAAAAAGATCGATTCAAGACGATTACAGACAACCTAAGCAAGAAAAACCCGACATGATCGTTGGCGgttcaAAGAGAACGAGACTTTCCGATCATGCTAAAGGAACGATATTAGCTGGGGATGATACGGGAAACGAAGACGATCGTGAATCAGATTCAGGTGGCGAGCTACGTGCCAATCATCCACTCGTTGTTTCCAGTCCCGTTGACAGTCAAGACGCTGAAGTAGCAAGAATGCGTACAAACAGCCTAAACGATTCCGAAGAAGGAAGCCCGGAGCCGGGTTCATCGAGTCCCACACATACACCACCCCTAACGCCTGCACTTACACCACAAAGAGAAAGTACACCAGCACCGGAGAACCTAAGCTTGCGTAAAAGCGGAAGTCCACCACAGACACAGCAAACTCCGCAAGCGGTCGATCTCGTACAACCCAGACCAAGTCCGCCATTAGCATCCTTGGCAGCAGCAGCAACGTCGGTACATTTTCCTACATATGCACCACTTTATGGACCAGCGGTTAGTTCACTTTATTGTTCCCCGGCAATCTATCAACATCAACATCATCCGAACGTACACGAGCCACGAGAAATACAAATGCAAATGCAAATGCAAAATATTCAACAACCATGCGGTATACAAGTTCAACAGCAACAAccacaacagcaacagcaacaacaacaacagcaacaacaacagcagcagcagcaacaacaaagGTCTCCAGTCGACGTTTTACTTCGCGTATTTCCTGGAAGACGTCGAGCCGACGTAGAAGCCCTTCTACATCGATATAAGGGTGACGTGGTATCAGCGATGGAAGTACTCGTATGCGAGGACAGTCTTCAACCAAAATCAGCGTTCTCACCATTGGCGGGTGCTTTGGCTTCAGCAGCAGCTGCTTCGGCATCAGTTTCAGCAGGTTACACGACACGCAGTGCTTATTGTACAACTCCGATCCCATCAACGAGACATAGATTTCTCGCAGCACCTTACGCTGGTACCGGTTACCTACCAACCGTGATAAAACCACCTAATCAAAGTATTCACGCAAATGGTACTGGTGATGCTTATCGAGAAACCTCACCGGATGATGCCAGTGATAAGACCAGTTATTCCGAGTGA
- Protein Sequence
- MSLPRGVGLGVDVGQLMQHQQQQHHQQQHHVLPAAFFLRASAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEESEARELGLQLQYNTGSCTGTPVLSGSATATTPTDSPSPHPVHVTNPTGLAIPAAAAAAAAAAAAAHIQTQLTQPECGMIQRKRSIQDDYRQPKQEKPDMIVGGSKRTRLSDHAKGTILAGDDTGNEDDRESDSGGELRANHPLVVSSPVDSQDAEVARMRTNSLNDSEEGSPEPGSSSPTHTPPLTPALTPQRESTPAPENLSLRKSGSPPQTQQTPQAVDLVQPRPSPPLASLAAAATSVHFPTYAPLYGPAVSSLYCSPAIYQHQHHPNVHEPREIQMQMQMQNIQQPCGIQVQQQQPQQQQQQQQQQQQQQQQQQQRSPVDVLLRVFPGRRRADVEALLHRYKGDVVSAMEVLVCEDSLQPKSAFSPLAGALASAAAASASVSAGYTTRSAYCTTPIPSTRHRFLAAPYAGTGYLPTVIKPPNQSIHANGTGDAYRETSPDDASDKTSYSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00769640;
- 90% Identity
- iTF_01233015;
- 80% Identity
- iTF_01234366;