Pmer004689.1
Basic Information
- Insect
- Polistes metricus
- Gene Symbol
- dsx
- Assembly
- GCA_010416925.1
- Location
- QUOH01000009.1:5512916-5584289[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-16 5.5e-13 48.2 12.0 3 45 28 70 27 72 0.93 2 2 4.7e-15 1.7e-11 43.5 13.2 3 47 184 228 182 228 0.96
Sequence Information
- Coding Sequence
- ATGGATCACGCGAACCAAGCTGTAACTAACCTTATGGAAAATAACGCATTTTCGAACAAGTCTACAGGCTCGCGAATAACGAGAAATTGTTCGCGATGTCGAAATCATGGATTAAAAGTTTCTCAGAAGGGCCATAAGAAAGACTGTATGTACCGCAATTGTGTTTGCGAATTTTGTAAACTTTTTTCGGCTCGACGGAGCACGACGTCAAGACGTATTCGACTAAGAACTCCCACTCTAGATAAgGATTCAACGCCACTCTCAATAGACGCGTCCTTTCTCGGCTCGAGGCCACAATCTGTGAAGAATCTCAAGGGAAGTTACGACAGCAACAACGGCGACTTGTCGGTCAGCAATCACGGAAGCAACGAAACTCAAGACGGGAACAACGATGTTACCAGAATTACTTCCTCAACAAAACCAGTATCTTCAAATCAGTCGCCTTCAGCAACAAAGTCCTGGCCGCAATGGCAGAACGGAACGGATTCTAATGTATCTTGGGATGCATCTTCTTCGACTTCGAACAATGGCAACAACTTGCGTGCAATAAAGACATGCTCACTTTGCCGCAATCACAATATTGTCAATATTTATAAGGGTCACAAGAGGTATTGCCGTTTTCTATGTTGTTTATGTCCATCTTGTCGTGAAACCCGTAAGGAACGGAAAAGAATGGCAACACAAACCGCAGTTAACAGGGCACGTATCCAAGACgaggaacaaataaaaaagtttggTAAGCTGGTGAAGCCGATAATTCCTCCGCAACAAGTAAATCATGTACCAACTATTTCACAACCAGTGTGGAGCGTCGAAGGCAATTATGGTGGCGATGgcattaacaatttaattagtACTCCGACTCCGAGAAAGGTGCCTGTTGATCCAATGATGCCTCCTTTGATCGATTTGATTCATTCAGAACCTAgCGTCGACGTCGACATTATATTAGCACGCAGCATGACTCTTCTGCAACAATTCCAAAATCCTTGGGATATTCTAACACTCCTGTATGTTACTGTGAAGTATGCCGGTGCAAATCTTTACGAGGCTATCAGACGTATTCATGAAGCAAGCAACGATATAAAAAGCTGGGAACTTAACATGATGAAAAACATTTGGAACGACAATAGGTTTTACTTTCCTGAATTCATACGGAAGACAGATATCACAGATGCGCCAACTTACGAAGGTGAAGCACCGTTCATTGGAGATCCGACCTCACAAGTTTCTGAACACTTCACGTCACTACCGCACCTCAGAAACACCCACATACCGACAAACAACAGCTCTTCGGAACATTATACCGAGTAG
- Protein Sequence
- MDHANQAVTNLMENNAFSNKSTGSRITRNCSRCRNHGLKVSQKGHKKDCMYRNCVCEFCKLFSARRSTTSRRIRLRTPTLDKDSTPLSIDASFLGSRPQSVKNLKGSYDSNNGDLSVSNHGSNETQDGNNDVTRITSSTKPVSSNQSPSATKSWPQWQNGTDSNVSWDASSSTSNNGNNLRAIKTCSLCRNHNIVNIYKGHKRYCRFLCCLCPSCRETRKERKRMATQTAVNRARIQDEEQIKKFGKLVKPIIPPQQVNHVPTISQPVWSVEGNYGGDGINNLISTPTPRKVPVDPMMPPLIDLIHSEPSVDVDIILARSMTLLQQFQNPWDILTLLYVTVKYAGANLYEAIRRIHEASNDIKSWELNMMKNIWNDNRFYFPEFIRKTDITDAPTYEGEAPFIGDPTSQVSEHFTSLPHLRNTHIPTNNSSSEHYTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01234365;
- 90% Identity
- iTF_01234365;
- 80% Identity
- -