Pmer000092.1
Basic Information
- Insect
- Polistes metricus
- Gene Symbol
- SUB1
- Assembly
- GCA_010416925.1
- Location
- QUOH01000007.1:5414008-5415721[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.23 3.2e+03 -2.6 0.3 28 37 29 38 27 38 0.71 2 2 4e-25 5.6e-21 73.4 0.3 1 51 57 108 57 109 0.96
Sequence Information
- Coding Sequence
- atgcCTAAATCAAAGGAATATGTCTCGAGCGATAGTGATAGCGACAGCGAAGtggaacaagtaaagaagaaacaaagaacagaaaaaggagaaaaagctGTTCCAAGTAAAAAgtcaaagaaagaaactaaagAAGTGGAAGAACCGAAGAATAATGAGGAAGACGTATGGGATTTAGGTGGCAGACGACAAGTAAATGTTCGAAATTTTAAAGGAAAACTCTTTGTTGATATAAGAGAAATGTACCTCGATAAAGAAGGAGATTTAAAGCCAAGTAAAAAAGgtatttgtttaaatatgatACAATGGCGCAAATTCATGTCAATCGTTGAAGAGGTTGATAAAGTTGCGAAATCAAAatgttga
- Protein Sequence
- MPKSKEYVSSDSDSDSEVEQVKKKQRTEKGEKAVPSKKSKKETKEVEEPKNNEEDVWDLGGRRQVNVRNFKGKLFVDIREMYLDKEGDLKPSKKGICLNMIQWRKFMSIVEEVDKVAKSKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01234354;
- 90% Identity
- iTF_01233665;
- 80% Identity
- iTF_01234354;