Pmer005760.1
Basic Information
- Insect
- Polistes metricus
- Gene Symbol
- retn
- Assembly
- GCA_010416925.1
- Location
- QUOH01000023.1:428908-570612[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-25 1.7e-21 76.1 0.0 2 89 287 372 286 372 0.96
Sequence Information
- Coding Sequence
- ATGGAGATGAGCGACGATTATCAAGACATGGTTAATCCTGGTGGAGGGATGGCAAATCTACAACCCATGGGGGAACACCATCAGCAAACGCCTGAGAGCTCACCGTCGAATCAAGAGGAGGAGTTATCGGATCCGGATTTGCAGGATCAAGAAAGTGGGGAAGAGTTACCCCCACGACCAAGGGTTGCAGTTCACCCTTCGGTTTTACCATCAAATACATCCGGAACTcctttatcaaatttaaacaaCCTTATGAACTCCCACAATCCGCAGTTTCTCGCCAAACTGAGGATGGAAgCGGAGGCCGATATATTAACAACAAAGAACAGCTTGGAGGTGTTGCAGGCTGCTATGAACAACGGTGTATTGAATTTGCAAGGGTTCCCATTACCCATATTGCCATTACCTAGCATGGGAATTGGTGGAATGATTCCACAAACGCCATCCGTAGCCACCACCTTGCCTATGAGCATTGGTGCAGAGGGTTGTTCTGGTACAGCAACAACGACGCAACAAGTGTTAAATGTGCCGATAGGTATTGGCCACCTGGATACAACTTCTAGCCCTTCCCGTTCGAGTGATTCTCCACGTTGTGGGTCAAGAAATGGCCCAGATTCTGCAACTAATTATTCGCTCAACGtcagcagcagtagcaacGGCGTCAACAATAAcagtcatcatcatcattcccACAACAGTAGTACTAGCAATAGCagcaacaataacaacaacaacaacaacaataacaacaacaatagtcagaataataataatcatcctCAGAATGGTCAGCAACCGAATAATTGGAACTTCGAAGATCAATTTAAACAGTTATACGAGCTCAGTGACGACCCAGGCCGACGAGAATTCTTGGACGATTTATTCAGCTTCATGCAAGGTCGTGGTACCCCGATAAATCGATTACCAATAATGGCCAAATCAGTATTGGATCTTTACGAGCTTTTTAATCTCGTGATAGCACGCGGCGGTTTGGTTGatgttataaacaaaaagcTTTGGCAGGAAATCATCAAGGGTCTCCAACTACCATCTAGCATCACTTCCGCCGCGTTTACTTTACGCACGCAATACATGAAATATCTTTACGAGTACGAATGCGCTAGAAAAAATTTATCCACCCCTGCCGAATTGAAATTAGCAATCGATGGTAATCGTCGCGAAGGACGTAGGAATACATATGTACAATTTCCAACCGGATCCGGTAACGACGGTCAAAGAAATCAATCAACGCCATTGTCAATGCGTTCGAGAATGTCACCTAATGCTATGCAATTACACCCACAAATTTCACCGCTTTCTTTGGTAACAGCGGCCGCAGTTACGTCAGCACAATCGATGGTCAATGGTAACTCGGTGCATCCGTCATTGGTGCAACATTCCCAGATATCCCAACTTCCTCAAGCGTCGTTGAACCATGCACAAAATATATCCCTTACGAGCGTAAATGCGACCGAATTCGAAGCACGAATGGCCGAATACATTAGGATTTATCATAGGGATAAATTTGTTGCAACGACGGGATCGTCACCACCGATAATATCTCAGCCAGCACTTGCGCATCATGCCTCTTTATCACCACAAGCATCACAATCCTCGTTGCAACCTGTGCCAAGCCCAGAACCACAAAGAGAAGCATTGGATCTTGGAGTTAGGTCATCATCTGTATGTTCCTCACCTTCTGTAGCCTGTGGACGAAGCCCTTTATCTTCGACCAGTATTTCACGAAAAAGGGATTCGGATTCAGTTACGTCTGCCCGAAAAAGGCGACTATCCGAAGTGGATGAATCTCCGGACATGGTTCAACCCTCAACTTCGTCTACCTCGAGAAACATCAAAATTTGCACAGAAACTAACAACGATGATGGTTCATTGAACGTCAGTCTTACAATAGAAGATGCAACTTATCGAGGAGTCCTATTTTTTGATTCAGGATCAAGATCAAAATCTAATTCGTCTAGTTCTAACAGTCCACCAACGACTAATGACAAATAA
- Protein Sequence
- MEMSDDYQDMVNPGGGMANLQPMGEHHQQTPESSPSNQEEELSDPDLQDQESGEELPPRPRVAVHPSVLPSNTSGTPLSNLNNLMNSHNPQFLAKLRMEAEADILTTKNSLEVLQAAMNNGVLNLQGFPLPILPLPSMGIGGMIPQTPSVATTLPMSIGAEGCSGTATTTQQVLNVPIGIGHLDTTSSPSRSSDSPRCGSRNGPDSATNYSLNVSSSSNGVNNNSHHHHSHNSSTSNSSNNNNNNNNNNNNNSQNNNNHPQNGQQPNNWNFEDQFKQLYELSDDPGRREFLDDLFSFMQGRGTPINRLPIMAKSVLDLYELFNLVIARGGLVDVINKKLWQEIIKGLQLPSSITSAAFTLRTQYMKYLYEYECARKNLSTPAELKLAIDGNRREGRRNTYVQFPTGSGNDGQRNQSTPLSMRSRMSPNAMQLHPQISPLSLVTAAAVTSAQSMVNGNSVHPSLVQHSQISQLPQASLNHAQNISLTSVNATEFEARMAEYIRIYHRDKFVATTGSSPPIISQPALAHHASLSPQASQSSLQPVPSPEPQREALDLGVRSSSVCSSPSVACGRSPLSSTSISRKRDSDSVTSARKRRLSEVDESPDMVQPSTSSTSRNIKICTETNNDDGSLNVSLTIEDATYRGVLFFDSGSRSKSNSSSSNSPPTTNDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01232210;
- 90% Identity
- iTF_01232210;
- 80% Identity
- -