Basic Information

Insect: Polistes fuscatus
Gene Symbol: ham
Assembly: GCA_010416935.1
Location: QUOI01000001.1:3711336-3746449[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.044 3.5 8.0 0.5 2 23 344 366 343 366 0.93

2 9 0.031 2.5 8.5 0.1 1 23 373 396 373 396 0.94

3 9 1.1e-08 8.7e-07 28.8 0.2 1 23 402 425 402 425 0.98

4 9 4.3e-06 0.00034 20.6 2.6 1 23 431 453 431 453 0.95

5 9 2.7e-05 0.0021 18.1 5.0 1 23 459 481 459 481 0.99

6 9 0.00041 0.033 14.4 0.7 2 21 489 508 488 509 0.95

7 9 6.2e-09 4.9e-07 29.6 1.2 1 23 879 901 879 901 0.99

8 9 3.3e-07 2.6e-05 24.1 1.7 1 23 907 930 907 930 0.97

9 9 0.00011 0.0085 16.2 3.7 1 23 936 958 936 958 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.044	3.5	8.0	0.5	2	23	344	366	343	366	0.93
2	9	0.031	2.5	8.5	0.1	1	23	373	396	373	396	0.94
3	9	1.1e-08	8.7e-07	28.8	0.2	1	23	402	425	402	425	0.98
4	9	4.3e-06	0.00034	20.6	2.6	1	23	431	453	431	453	0.95
5	9	2.7e-05	0.0021	18.1	5.0	1	23	459	481	459	481	0.99
6	9	0.00041	0.033	14.4	0.7	2	21	489	508	488	509	0.95
7	9	6.2e-09	4.9e-07	29.6	1.2	1	23	879	901	879	901	0.99
8	9	3.3e-07	2.6e-05	24.1	1.7	1	23	907	930	907	930	0.97
9	9	0.00011	0.0085	16.2	3.7	1	23	936	958	936	958	0.99

Sequence Information

Coding Sequence: ATGTTCGAATATTTTGTTCCAGGAAGCAGCGACGAAGGCGATTCGGGGTCAGGAACGATAACCGGAAgaggaggaggaggaggaggtggaggagggaCAGGAATAGAGAGTAATAACGAGATGGAGAAAAATAGTAACagcaataacaacaacaatactaataacaataataatagtagtggAAGTAGTAACAACGCAAGTAACGGAAACCCAACTTACAGAGATTTCAAATCTCTTCAAATGTCTAATGCGATACAGGACATACCAATAGATTACAATACTTCGCAAAATAGGAACAACTATCAacatcatcaacaacaacaacaacagcaacaacaacaacaacagggTGAGTATTTCCCAGCGATGGAAATACAACagaattatgaaaattataagaagGAACAACAGAGGCCACCATCTGTGAGAGATGATGATAGAAGAATGTCCTGGGATTATCTCGACAAACAAAACGATCAACAGAGAGATTATTCGAGAACGAGGAACGAATATCAGGAGACGATAAAGCAAGAGCCAAAGGACCAATTGAGTCAAGAGTGGGTGTCACTCGTACCGGAAGTCGAGGTTGGTGGTTCAGCTCCTGGTGGGCCTCAAGTTCGAGCACGGAAAGATATACCAAGGGGTACCAGATTCGGTCCTTTTTCCTGCAAGTGGGTGAGCGAGCCTTTCAATCCACGTTACGCATGGGAGGTTAGAATAGTTGGAAGTGGATCGAAAGGATGGTTGGATGCTTCTCACGAAAGTAGAAATTGGTTGAAATATATTCGCAGTACTGCCAGTCCGCATTTGGTCAATTTGAAACACATTCTCATTGGTGGAgagattatttacgAGACCATTCGGGACATCGCTATTGGCGAAGAACTATTTCTAGGACTTCGTGAACCACTCCAATTGCAGGACATCCTCGGTGAAAATATACCCGAAGATAGAAGCGACAGAGAAACTGCTTCGCAACACAGTGGCACGGTAGATGAAGATCGAGAAGACGAAGAGGAATCTGAAACTAGATGTACTGTCTGTGACAAACCCTTTCAAGAAATAGACTTaTTAGACGAACACCTGGTGACTTGTCACAGATATCCAGCGAAACAACATCAGTGCAGTGACTGTCCTCGTGGTTACGCTTGGCGTGGGCTTTTAGTACGTCATCGTGCAATCGTTCATGGTGATCGGAGGAATTATCCTTGCGAGAATTGTCCTAGGGTATTTACGGACCCGTCTAATCTCCAACGTCACATCCGTTCCAATCACGTCGGTGCTAGGAGTCACGCATGCACCGAGTGCGGCAAAACTTTCGCCACGAGTTCGGGATTGAAGCAGCACACTCATATTCACAGCAGCGTTAAACCATTCCAGTGTGAGGTTTGTTTCAAGGCGTACACGCAGTTCTCCAATCTCTGCCGACACAAGCGTATGCACGCGGATTGTCGCATGCAAATAAAGTGCGCCAAATGTGGCCAATCATTCAGCACGGTAACGTCATTGTCGAAGCATAAACGTTTCTGCGATTCAACGACACCGACAGGCCCACCAGGAACGATGCCACAATTACCGTCATCAGCACCTAGTCCATTCCTTGTTTATCCTAGACCACCGGTTAGTTTACCAGGTGGTTTACCATTCTATCCACCTAGTCTGATGGCACCTTACCCTGGAATATTCCCAAATGCTCCTAATTTTCTCAACTCACCTTTAATATTTCCACCTAAACTCGACGAAACAGAGAAACCTAGTAGAAGCGAGAGTCCAAGAAAGGAACGTTTCACACCACCACGAGTTCATTCGCAACACAATAAAATCTCACCGTCGGCTGGCGAGGAAGCAACCTCTTTGTTCAGGCCGTCGCCAGCTAGACCACTCGTTCAACAACAACCCACCTCGGAATCCGAAGAGGATCAAAGCAAACGTCGAGACAACGTTGGGAAaagtaacgagaagaaaatggAAATCGAAACATTGAACAATGCGTCCTCGACGGAAGAATCTACCGATCAGCCATTGGATCTGAGGGTGCAAACGAAAAAACAGGACGTTTTTATCGACGATAAAATGAGTGTAAGTCAATCCTCGACACCGGTTCCGATCGAGGAACCTCCGCCATTACCACCACCGCCTATAGATCCACCCAGAACTGAGGAAGAAAATGTTGTACCGGTTCCACAAATGGCTGTTATAGAACCAAAAGACGTGCCGAGTAGTCCGCGACTAAGAACAAGTCTTTCTACGGATCAACCACCAACGAACACCCCTCCACACATGGCCTATCCCAGACCATATCATCCAATGATTCTGGAGGCCATGATACAGTACCGTCCACCTGGAAACACTTTCCCTTCGTTCCCAGGTGGACCTCCAACAGCAGGAGGTGCCTCGGCAGAGTCGAGATTGTTACCACCTCTTCCACCATTCGTGCCACCCCGTGGACTTCCTTTTTTAGGGACATACATGAACGGGCTCAGCGGCGCCAGGCCAGGTGGGGGATTCGACCTGCTAGCCAGGCCACCGATGGGTGCGTTCCCCGGTGTGAAACCATTTCAAGATGCCGTGATGCCAccccatcaccatcaccatcatcatcatcatcacgcCCACGGTAAAATCAAGGATAGATATTCTTGTAAATTTTGCGGCAAAGTATTTCCACGGTCGGCCAATCTTACCAGGCATTTGCGTACGCATACTGGCGAGCAACCGTACAAGTGCAAATACTGCGAAAGATCGTTCAGTATATCGAGTAATCTACAACGACACGTTAGAAACATACACGATAAGCAACGACCGTTCAAATGTGTATTATGCGAAAGATGTTTCGGTCAACAAACTAATTTGGATCGACACTTGAAGAAACACGAAGCTGACGATGGTAGCGGTGTAGTCGCGGTTGCTGATTCACCGGGTAGCAGTAACGAAAACGAACGGGAAGATACATATTTCGACGAGATTAGAACGTTTATGGGTAAAGTTACTTACAATGGTGAACCGTACCATTTACAACCACATCCATATTTATCCGGTCGAACGCACGAAATGAACGAATCCAAAATGGAAATTGAATACGACGAAGACGAGGATAGCGAAGAAGGTGCTTCGCCATTGGAAGAAACTGATAATCTTTCTCCCTTGGAGACCAAGGATTCGCCATCCCCATCTCAATACGATCTCAAATTGAGGGACAAACaggaattattaaacaataacaCGGCCGAACCAGTCATTGAAATCTCCACATAA
Protein Sequence: MFEYFVPGSSDEGDSGSGTITGRGGGGGGGGGTGIESNNEMEKNSNSNNNNNTNNNNNSSGSSNNASNGNPTYRDFKSLQMSNAIQDIPIDYNTSQNRNNYQHHQQQQQQQQQQQQGEYFPAMEIQQNYENYKKEQQRPPSVRDDDRRMSWDYLDKQNDQQRDYSRTRNEYQETIKQEPKDQLSQEWVSLVPEVEVGGSAPGGPQVRARKDIPRGTRFGPFSCKWVSEPFNPRYAWEVRIVGSGSKGWLDASHESRNWLKYIRSTASPHLVNLKHILIGGEIIYETIRDIAIGEELFLGLREPLQLQDILGENIPEDRSDRETASQHSGTVDEDREDEEESETRCTVCDKPFQEIDLLDEHLVTCHRYPAKQHQCSDCPRGYAWRGLLVRHRAIVHGDRRNYPCENCPRVFTDPSNLQRHIRSNHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCAKCGQSFSTVTSLSKHKRFCDSTTPTGPPGTMPQLPSSAPSPFLVYPRPPVSLPGGLPFYPPSLMAPYPGIFPNAPNFLNSPLIFPPKLDETEKPSRSESPRKERFTPPRVHSQHNKISPSAGEEATSLFRPSPARPLVQQQPTSESEEDQSKRRDNVGKSNEKKMEIETLNNASSTEESTDQPLDLRVQTKKQDVFIDDKMSVSQSSTPVPIEEPPPLPPPPIDPPRTEEENVVPVPQMAVIEPKDVPSSPRLRTSLSTDQPPTNTPPHMAYPRPYHPMILEAMIQYRPPGNTFPSFPGGPPTAGGASAESRLLPPLPPFVPPRGLPFLGTYMNGLSGARPGGGFDLLARPPMGAFPGVKPFQDAVMPPHHHHHHHHHHAHGKIKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCVLCERCFGQQTNLDRHLKKHEADDGSGVVAVADSPGSSNENEREDTYFDEIRTFMGKVTYNGEPYHLQPHPYLSGRTHEMNESKMEIEYDEDEDSEEGASPLEETDNLSPLETKDSPSPSQYDLKLRDKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01235195; iTF_01232558; iTF_01233169;
90% Identity: iTF_01235195; iTF_01233169; iTF_01233829; iTF_01232558;
80% Identity: -