Basic Information

Insect: Polistes dorsalis
Gene Symbol: mecom-b
Assembly: GCA_010416905.1
Location: QUOG01000012.1:2221672-2237072[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.039 2.7 8.3 0.5 2 23 145 167 144 167 0.93

2 9 0.028 2 8.8 0.1 1 23 174 197 174 197 0.94

3 9 3.4e-05 0.0024 17.9 0.3 1 23 203 231 203 231 0.95

4 9 3.9e-06 0.00027 20.9 2.6 1 23 237 259 237 259 0.95

5 9 2.4e-05 0.0017 18.4 5.0 1 23 265 287 265 287 0.99

6 9 0.00047 0.033 14.4 0.7 2 21 295 314 294 315 0.95

7 9 5.6e-09 3.9e-07 29.9 1.2 1 23 685 707 685 707 0.99

8 9 2.9e-07 2e-05 24.4 1.7 1 23 713 736 713 736 0.97

9 9 9.6e-05 0.0067 16.5 3.7 1 23 742 764 742 764 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.039	2.7	8.3	0.5	2	23	145	167	144	167	0.93
2	9	0.028	2	8.8	0.1	1	23	174	197	174	197	0.94
3	9	3.4e-05	0.0024	17.9	0.3	1	23	203	231	203	231	0.95
4	9	3.9e-06	0.00027	20.9	2.6	1	23	237	259	237	259	0.95
5	9	2.4e-05	0.0017	18.4	5.0	1	23	265	287	265	287	0.99
6	9	0.00047	0.033	14.4	0.7	2	21	295	314	294	315	0.95
7	9	5.6e-09	3.9e-07	29.9	1.2	1	23	685	707	685	707	0.99
8	9	2.9e-07	2e-05	24.4	1.7	1	23	713	736	713	736	0.97
9	9	9.6e-05	0.0067	16.5	3.7	1	23	742	764	742	764	0.99

Sequence Information

Coding Sequence: ATGTTGGATAGAAGGTTAGAgtgtgatggtggtggtagtggtgatgATGATAGGGCGGATATATCCAAGATCGACGGTCCGTTAAACGCAATGTTCCGGATCCGAAAGCTTGCGGTTAGAATAGTTGGAAGTGGATCGAAAGGATGGTTGGATGCTTCTCACGAAAGTAGAAATTGGTTGAAATATATTCGCAGTACTGCCAGTCCGCATTTGGTCAATTTGAAACACATTCTTATTGGTGGAGagattatttacgAGACCATTCGGGACATCGCTATTGGCGAAGAACTATTTCTAGGACTTCGTGAACCACTCCAATTGCAGGACATCCTCGGTGAAAATATACCCGAAGATAGAAGCGACAGAGAAACTGCTTCGCAACACAGTGGCACGGTAGATGAAGATCGAGAAGACGAAGAGGAATCTGAAACTAGATGTACTGTCTGTGACAAACCCTTTCAAGAAATAGACTTATTAGACGAACACCTGGTGACTTGTCACAGATATCCAGCGAAACAACATCAGTGCAGTGACTGTCCTCGTGGTTACGCTTGGCGTGGGCTTTTAGTACGTCATCGTGCAATCGTTCACGGTGATCGGAGGAATTATCCTTGCGAGAATTGTCCTAGGTCGAACACCCGGCAGGTATTTACGGACCCGTCTAATCTCCAACGTCACATCCGTTCCAATCACGTCGGTGCTAGGAGTCACGCATGCACCGAGTGCGGCAAAACTTTCGCCACGAGTTCGGGATTGAAGCAGCACACTCATATTCACAGCAGCGTTAAACCATTCCAGTGTGAGGTTTGTTTCAAGGCGTACACGCAGTTCTCCAATCTCTGCCGACACAAGCGTATGCACGCGGATTGTCGCATGCAAATAAAGTGCGTCAAATGTGGCCAATCATTCAGCACGGTAACGTCATTGTCGAAGCATAAACGTTTCTGCGATTCAACGACACCGACAGGCCCACCAGGAACGATGCCACAATTACCGTCATCAGCACCTAGTCCATTCCTCGTTTATCCCAGACCACCGGTTAGTCTACCAGGTGGTTTACCATTCTATCCACCTAGTCTGATGGCACCTTACCCTGGAATATTCCCAAATGCTCCTAATTTTCTCAACTCACCTTTAATATTTCCACCTAAACTCGACGAAACAGAGAAACCTAGTAGAAGCGAGAGTCCAAGAAAGGAACGTTTCACCCCACCACGAGTTCATTCGCAACACAGTAAAATCTCACCGTCGGCTGGCGAGGAAGCAACCTCTTTGTTCAGGCCGTCGCCAGCTAGACCACTCGTTCAACAACAACCCACCTCGGAATCCGAAGAGGATCAAAGCAAACGTCGAGACAACGTTGGGAAAAgtaacgagaagaaaatgGAAATCGAAACATTGAACAATGCGTCCTCGACGGAAGAATCTACCGATCAGCCATTGGATCTGAGGGTGCAAACGAAAAAACAGGACGTTTTTATCGACGATAAAATGAGTGTAAGTCAATCCTCGACACCGGTTCCGATCGAGGAACCTCCGCCATTACCACCACCGCCTATAGATCCACCCAGAAATGAGGAAGAAAATGTTGTACCGGTTCCACAAATGGCTGTTATAGAACCAAAAGACGTGCCGAGTAGTCCGCGACTAAGAACAAGTCTTTCTACGGATCAACCACCAACGAACACCCCTCCACACATGGCCTATCCCAGACCATATCATCCAATGATTCTGGAGGCCATGATACAGTACCGTCCACCTGGAAACACTTTCCCTTCGTTCCCAGGTGGACCTCCAACAGCAGGAGGTGCCTCGGCAGAGTCGAGATTGTTACCACCTCTTCCACCATTCGTGCCACCCCGTGGACTTCCTTTTTTAGGGACATACATGAACGGGCTCAGCGGCGCCAGGCCAGGTGGGGGATTCGACCTGCTAGCCAGGCCACCGATGGGTGCGTTCCCCGGTGTGAAACCATTTCAAGATGCCGTGATGCCAccccatcaccatcaccatcatcatcatcatcacgcCCACGGTAAAATCAAGGATAGATATTCTTGTAAATTTTGCGGCAAAGTATTTCCACGATCGGCCAATCTTACCAGGCATTTGCGTACGCATACTGGCGAGCAACCGTACAAGTGCAAATACTGCGAAAGATCGTTCAGTATATCGAGTAATCTACAACGACACGTTAGAAACATACACGATAAGCAACGACCGTTCAAATGTGTACTATGCGAAAGATGTTTCGGTCAACAAACTAATTTGGATCGACACTTGAAGAAACACGAAGCTGACGATGGTAGCGGTGTAGTTGCGGTTGCTGATTCACCTGGTAGCAGTAACGAAAACGAACGGGAAGATGCTTATTTCGACGAGATTAGAACGTTTATGGGTAAAGTTACTTACAATGGTGAACCGTACCATTTACAACCACATCCATATTTATCCGGTCGAACGCACGAAATGAACGAATCCAAAATGGAAATTGAATACGACGAAGACGAGGATAGCGAAGAAGGTGCTTCGCCATTGGAAGAAACTGATAATCTTTCTCCCTTGGAGACCAAGGATTCGCCATCCCCATCTCAATACGATCTCAAATTGAGGGACAAACaggaattattaaacaataacaCGGCCGAACCAGTCATTGAAATCTCCACATAA
Protein Sequence: MLDRRLECDGGGSGDDDRADISKIDGPLNAMFRIRKLAVRIVGSGSKGWLDASHESRNWLKYIRSTASPHLVNLKHILIGGEIIYETIRDIAIGEELFLGLREPLQLQDILGENIPEDRSDRETASQHSGTVDEDREDEEESETRCTVCDKPFQEIDLLDEHLVTCHRYPAKQHQCSDCPRGYAWRGLLVRHRAIVHGDRRNYPCENCPRSNTRQVFTDPSNLQRHIRSNHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCGQSFSTVTSLSKHKRFCDSTTPTGPPGTMPQLPSSAPSPFLVYPRPPVSLPGGLPFYPPSLMAPYPGIFPNAPNFLNSPLIFPPKLDETEKPSRSESPRKERFTPPRVHSQHSKISPSAGEEATSLFRPSPARPLVQQQPTSESEEDQSKRRDNVGKSNEKKMEIETLNNASSTEESTDQPLDLRVQTKKQDVFIDDKMSVSQSSTPVPIEEPPPLPPPPIDPPRNEEENVVPVPQMAVIEPKDVPSSPRLRTSLSTDQPPTNTPPHMAYPRPYHPMILEAMIQYRPPGNTFPSFPGGPPTAGGASAESRLLPPLPPFVPPRGLPFLGTYMNGLSGARPGGGFDLLARPPMGAFPGVKPFQDAVMPPHHHHHHHHHHAHGKIKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCVLCERCFGQQTNLDRHLKKHEADDGSGVVAVADSPGSSNENEREDAYFDEIRTFMGKVTYNGEPYHLQPHPYLSGRTHEMNESKMEIEYDEDEDSEEGASPLEETDNLSPLETKDSPSPSQYDLKLRDKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01090161;
90% Identity: iTF_01234516;
80% Identity: -