Pfus009506.1
Basic Information
- Insect
- Polistes fuscatus
- Gene Symbol
- Epn2
- Assembly
- GCA_010416935.1
- Location
- QUOI01000002.1:8807393-8820053[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00016 0.013 15.7 1.7 2 23 316 337 315 337 0.97 2 11 9.7e-05 0.0077 16.4 2.8 1 23 345 368 345 369 0.96 3 11 0.00085 0.067 13.4 2.8 1 23 414 436 414 436 0.97 4 11 1.9e-06 0.00015 21.7 2.0 2 23 497 518 497 518 0.98 5 11 2.6e-05 0.002 18.2 1.0 1 23 523 546 523 546 0.96 6 11 2.5e-05 0.002 18.2 0.4 1 23 584 606 584 606 0.98 7 11 1.2e-06 9.5e-05 22.4 0.9 1 23 616 638 616 638 0.96 8 11 2.7e-05 0.0021 18.1 1.4 1 23 644 666 644 666 0.99 9 11 1.7e-05 0.0014 18.7 0.2 1 23 672 694 672 694 0.98 10 11 0.00013 0.01 16.0 4.6 1 23 700 722 700 722 0.98 11 11 0.00063 0.05 13.8 0.3 1 21 728 748 728 749 0.94
Sequence Information
- Coding Sequence
- ATGGAATTGTCAGATGATGGGAGAGGCATTAAAAACTTTGAAGATGCACGAATTAATGTAAACGAAGATTGTCGAATCTGTTTACAAAAGTCCAACGGAGCATGTCAACTTTTTCCAAACAACAAAGGCTTTTCTCAGAAACTAATGGCAATTGCTGGTGTGCAGgTAAAAGAAGGAGATGGATTGCCATCGGTAATATGTTTCGATTGTTCTCAACTTCTTGACATATCCTACAACTTTCGAAGTCAAATACAAAAGACAGATACAAAATTACGTGAAATATTGAAACTCGGATCATGTACAGCAAAAgatattgaaaatgaattgaaagtagaagatcatttttctaatatcatAGCAGATGCAATATTACAAAGAAAAGTTACAAATCATATTGGCAATGATAATAAAGATGGTGAGGATGATGATAATGGTAATAGAGAGTGCAGTAGTAATATCCATGAGCCATCTATACAAATTGATGTACAAAGTTTTCCTAATGATCAACATGATTTCGCTTccgaaataattaatgataatatagaTTCCAATGACAAGTGCAATTCAGTAATTGAActagaaaataaacaagaacCATACAAAGTTatagaaaacataaaattacCTCAAAGTTGTGAAAGCATtacaaataagataaatagTGTAACATGTCATTCGTCTAATTTAATAACAGAAACAGAATGTATTAAAGAAGAATTGTTAcgtgaaaaaaatgtatcagaAAGTAATAATTCCATCGACCAAAGCACTGTAAGACAAGAACAAATATTCaaacttgaaataaaaaatgagttAGAAAAGTTAAACTATAATACACTTATAGAAAGTTCATCCAAAAGTATTAATATtcaagaagaaggaaaaccTATCTATAATTGTAGTGATGATGAGGAAAAACCTTTAATTAGCAGAACTACAAGACAGAAATGTTCACAATGCATTAAATCATTTACTACACGTTTAGCTTTACAAAGACACATGAAAGTACATAAACATAAAGCAGAATTACGTTACGTTTGTTACATATGTgataaacaattttcaaatattactaAATTAAAGAACCACATTAATAATAGACATCATGtacgttttaataataagaaaagagagaaagagaatagtgACAATAAAGATGTACATTTAAAAGCAGGggatattgataataattgtaataattctaTGGATAATACtaaaactgaaaaaaaaaattgtaaatttatatgtaaagtTTGTTCCAAGCAATTTACATATCAAAAATCTTTTTTGACACATGCTAAAAGTCATCCAGAATACAATCCTGaagatttaaatgatttttctagTGAAACTGGAACCCAGTTGaatgaaatcaaaaataaatctgtactaaaacaaaatgaatcaGACGATGGAAATAATGACGACGTTGATGATATTGATAACGACGATGacaatgataatgataatttacCAATGGAGAGTCCTCAATGTACACAATGTGGAAAATTATTTGCAACCAAAAGAAATCTTAAAAGGCATATTTCTACTCACAGTGGTTTGAAATACAATTGTTCGACTTGTGGAAAAGTCTTTTCaagaatagataaattaaaagacCACGAACAATCAAAGCATAAGGATGAAATATTTGGAAACTCAGAAGAAGAGAATGAAGATGACAcagataatgaaaataaagttaatGATGGTTCTAATGAACGAAAAAagGGTAGGCATAATAGACCACATAAATGTGCTCTCTGTCCAAAAGCATTTGCTCAACAGCAATCTTTAGCTAATCATATAGAAAGACATAAACGTACTAAAGATAGTCAAAAGCGATTTTTGTGCGAAGTTTGTAGCAAATGTTTTGCTCAAAGTGGTTCACTGGTTGCTCATATGCGTACTCATACTGGCATTAAACCatatgtatgtaatgtttGCAGTAGAGCTTTCACTAAAAGCACATATCTGCAATTACATTCAAGGACTCATAGCGGAGAAAAGCCTTATATTTGTCAATATTGTAGTAGAGCATTTGCACGTGCCAATACTTTAGCCAGGCATATAACGATGCACACGGGAGAAGCTAAATATCACTGCCAGATTTGTACTAAGTCTTTCAGACGATTAACTTCTTTAAAtgaacacacatacacgcatactgGTCAAAGACCATATGCATGTAAAATATGTACAAAAAGATACAACAATGCAGGTTCTTTGTATGcacatacaaaaaaatgtaaagctCAGCAATTGTCTAACTCTACAACAACTTTTACTGTTTCAATGGATAATACATTGCAACAAAGTAGTGGACCCACATCACAGGTTTTAATCTATTctcaaagaaaattattagagGATGCTACTGTTGGTCAAATAACACCAACTCCGCAATACATGATTGCTAATGTACATAATCAAAAAGCCTTATCTACAAATATTATGCAACCATTTACGGTTGAGGATCCAAATGGTTTTATTCTGATTTGGAGAATATTGGGAGTTTTCTATATTTCTGGACAAGACGTAGTTTCATCAACACCAGCGGCGAAACTTGACATGCCAACAATGGCTATGCAAAAGATGAGAAGACAAGGCCAAGATGTCATGCAAATGAACTTAGCTGGTATTAGGCGAGATATTGTAAATCTTGCTCATAATTATAGCAGTGCACAGAAAGCTGTAAGAAAAGCTACCAGTAATGATCCTTGGGGTCCAAGTAGTACTCTTATGGCAGAAATAGCTGATTTGACATATAATGTTGTGGCCTTTACTGAAATTATGCAAATGTTATGGAAAAGACTTAATGACCATGGTAAAAATTGGAGACATGTTTACAAAGCTTTGGTACTTTTAGAGTATCTTATAAAAACTGGTACAGAAAAAGTTGCACAACAAtgtaaggaaaatatttttgccaTTCAAACGTTGAAAGatttcCAACATATGGAAGGACATAAAGATCAAGGTATTAATGTGCGAGAGAAAGCAAAACAGTTAGTGGCCTTATTAAAAGATgatgaaagattaaaaaatgaaagagctAGAGCATTGAAGGCCAAAGAGAGATTTGCTCAAACAGTTAGTGGTTTTGGAAGTGATGGTTTAGATACAATGTCACCTGTAAGCAGCGATTTTCAAGATTGGGAGCCTTGTAATTTGACCGAATCAGCATCACGACCTGAATTAGAAGCAGCTAGACCGCAAACAGTGGGCGAAGAAGAACTACAACTGCAGCTAGCACTTGCTATGTCAAGAGAAGAAGCAGAACAAGAGGAACAACGACGGCGAAGTGATGACGTTCGATTACAATTAGCACTAAGTCAAAGCCAGCAGGATTTCAAAGCACCACAAACTGAAAAGCAAAGTCATATGCTTGATTTACTAGATGTAAATCTAGGCGAAGCTAGCGGCTCTTCTGCGCAGAATGATCCTTGGAGTATTCCGGTTACAGCTCCACCTCCAAGACCTcagacTCAAAATGATCCTTGGAGTATACCAACAACAAGCAATAATTCACCTGCAATAGATCCATGGGCTCCTGTCACATCTCAAAAGCAggCTGTTGTTAACGATCCATGGAAAGCACCTGCTCCATCTCCATCAGCAGTAGTTACTCCTCGCTCGGCAGATCCTTGGTCGCCAGCACCAACTGCTAATGAACCTGAGGCATCTAAAATTGAAgTTCGccaagataaaatattatcttcatCTCCAACCTTCAATAACCCAACTTTAACACAAAATATTGGTTTTACGGCGCAATCACCACAAAACATCggttttaatttatcaaatccCGCAAATGCTGCCTTCGGTACTATGAGCAACGGCTTTAAGGATCCTGGCTCTACTTTTAGCAATTTTCCTTCTCAAACTCATGGTAGTTCGGCTACAAGTCCATTGAGCGAGCTTGATGAATTTGATGTAATCAGTCAGAGGAACAAACTTGGAGGTGGTTCACAAACTACAAACAAtgGGACTACATTATCTTCAGATCCATTTGATTTAAGTGGTATAGGTGAATCTTTACCTCAGAGCACTGGTGCAATTAAAAAGACGCCACAATCCTTTCTTGGTGAAAATTCTGCTCTTGTAAACTTGGATAATCTTGTCAGCACTTCTACAATTAAAACAGTTACTCCAACACCAACAGgtaattga
- Protein Sequence
- MELSDDGRGIKNFEDARINVNEDCRICLQKSNGACQLFPNNKGFSQKLMAIAGVQVKEGDGLPSVICFDCSQLLDISYNFRSQIQKTDTKLREILKLGSCTAKDIENELKVEDHFSNIIADAILQRKVTNHIGNDNKDGEDDDNGNRECSSNIHEPSIQIDVQSFPNDQHDFASEIINDNIDSNDKCNSVIELENKQEPYKVIENIKLPQSCESITNKINSVTCHSSNLITETECIKEELLREKNVSESNNSIDQSTVRQEQIFKLEIKNELEKLNYNTLIESSSKSINIQEEGKPIYNCSDDEEKPLISRTTRQKCSQCIKSFTTRLALQRHMKVHKHKAELRYVCYICDKQFSNITKLKNHINNRHHVRFNNKKREKENSDNKDVHLKAGDIDNNCNNSMDNTKTEKKNCKFICKVCSKQFTYQKSFLTHAKSHPEYNPEDLNDFSSETGTQLNEIKNKSVLKQNESDDGNNDDVDDIDNDDDNDNDNLPMESPQCTQCGKLFATKRNLKRHISTHSGLKYNCSTCGKVFSRIDKLKDHEQSKHKDEIFGNSEEENEDDTDNENKVNDGSNERKKGRHNRPHKCALCPKAFAQQQSLANHIERHKRTKDSQKRFLCEVCSKCFAQSGSLVAHMRTHTGIKPYVCNVCSRAFTKSTYLQLHSRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICTKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHTKKCKAQQLSNSTTTFTVSMDNTLQQSSGPTSQVLIYSQRKLLEDATVGQITPTPQYMIANVHNQKALSTNIMQPFTVEDPNGFILIWRILGVFYISGQDVVSSTPAAKLDMPTMAMQKMRRQGQDVMQMNLAGIRRDIVNLAHNYSSAQKAVRKATSNDPWGPSSTLMAEIADLTYNVVAFTEIMQMLWKRLNDHGKNWRHVYKALVLLEYLIKTGTEKVAQQCKENIFAIQTLKDFQHMEGHKDQGINVREKAKQLVALLKDDERLKNERARALKAKERFAQTVSGFGSDGLDTMSPVSSDFQDWEPCNLTESASRPELEAARPQTVGEEELQLQLALAMSREEAEQEEQRRRSDDVRLQLALSQSQQDFKAPQTEKQSHMLDLLDVNLGEASGSSAQNDPWSIPVTAPPPRPQTQNDPWSIPTTSNNSPAIDPWAPVTSQKQAVVNDPWKAPAPSPSAVVTPRSADPWSPAPTANEPEASKIEVRQDKILSSSPTFNNPTLTQNIGFTAQSPQNIGFNLSNPANAAFGTMSNGFKDPGSTFSNFPSQTHGSSATSPLSELDEFDVISQRNKLGGGSQTTNNGTTLSSDPFDLSGIGESLPQSTGAIKKTPQSFLGENSALVNLDNLVSTSTIKTVTPTPTGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01233149;
- 90% Identity
- iTF_01233149;
- 80% Identity
- -