Basic Information

Insect: Polistes dorsalis
Gene Symbol: -
Assembly: GCA_010416905.1
Location: QUOG01000002.1:7679860-7690237[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.2e-05 0.003 17.6 1.4 1 23 449 471 449 471 0.96

2 16 1.5e-05 0.0011 19.1 1.9 1 20 477 496 477 499 0.94

3 16 1.1e-05 0.00074 19.5 1.4 1 23 505 527 505 527 0.98

4 16 6.1e-05 0.0043 17.1 4.4 1 21 533 553 533 555 0.95

5 16 8.2e-06 0.00058 19.9 5.6 1 23 561 583 561 583 0.99

6 16 1.9e-05 0.0013 18.8 5.3 1 23 589 611 589 611 0.97

7 16 7.1e-05 0.005 16.9 6.9 1 23 617 639 617 639 0.96

8 16 2.5 1.8e+02 2.6 0.3 1 9 645 653 645 653 0.89

9 16 4.3e-07 3e-05 23.9 2.9 1 23 655 677 655 677 0.98

10 16 6.3e-06 0.00044 20.2 7.8 1 23 683 705 683 705 0.98

11 16 2e-05 0.0014 18.7 9.1 1 23 711 733 711 733 0.98

12 16 2.6e-05 0.0018 18.3 7.5 1 23 739 761 739 761 0.98

13 16 0.0013 0.088 13.0 8.8 1 21 767 787 767 789 0.94

14 16 9.6e-06 0.00067 19.7 0.4 1 23 795 817 795 817 0.98

15 16 0.023 1.6 9.0 4.5 1 23 827 849 827 849 0.98

16 16 3.7e-07 2.6e-05 24.1 1.3 1 23 855 877 855 877 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.2e-05	0.003	17.6	1.4	1	23	449	471	449	471	0.96
2	16	1.5e-05	0.0011	19.1	1.9	1	20	477	496	477	499	0.94
3	16	1.1e-05	0.00074	19.5	1.4	1	23	505	527	505	527	0.98
4	16	6.1e-05	0.0043	17.1	4.4	1	21	533	553	533	555	0.95
5	16	8.2e-06	0.00058	19.9	5.6	1	23	561	583	561	583	0.99
6	16	1.9e-05	0.0013	18.8	5.3	1	23	589	611	589	611	0.97
7	16	7.1e-05	0.005	16.9	6.9	1	23	617	639	617	639	0.96
8	16	2.5	1.8e+02	2.6	0.3	1	9	645	653	645	653	0.89
9	16	4.3e-07	3e-05	23.9	2.9	1	23	655	677	655	677	0.98
10	16	6.3e-06	0.00044	20.2	7.8	1	23	683	705	683	705	0.98
11	16	2e-05	0.0014	18.7	9.1	1	23	711	733	711	733	0.98
12	16	2.6e-05	0.0018	18.3	7.5	1	23	739	761	739	761	0.98
13	16	0.0013	0.088	13.0	8.8	1	21	767	787	767	789	0.94
14	16	9.6e-06	0.00067	19.7	0.4	1	23	795	817	795	817	0.98
15	16	0.023	1.6	9.0	4.5	1	23	827	849	827	849	0.98
16	16	3.7e-07	2.6e-05	24.1	1.3	1	23	855	877	855	877	0.97

Sequence Information

Coding Sequence: ATGAACAGCGAGCAGCATGCATTGCCAGCGACTACGCAGGCTCAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCATACCCAGGTGGTTTGGCTACTTCGACTGGCCTTGGCAATGTGGGGAATACCCCTCATTCATCCGCGGACCTGCGTGTAGGTACAGCTGTAGCGTTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTGACCAATCTGTTTCCCGGACCGCTACCTCAGGTCTCAGTCTACCACCATTCCCACCACAACTCCTCTCATAGGAGCGGTGGAAGTGGGGAGGCATCTTCCAAAGAGCCAGCCTCCTCGTTGAATCAGGAAATGGCATTGAACTCCAGCTCTCATCATCAATCAACTTCTCAGTCGgctcatcatcaccatcaacCTTCAGTTAGCAGTAGCAACCATCATGGCTCTATGCAGTCCAACTCTCAGATTCCAGTTTCTCTTCCTGGCCTTAATCTAGACGCCCATATCCCGACGAGCGTTAGTCACTTGCAGGCAGCACACGCGCAAATGCAACAACAAATGCAGGCACAACAGCAGCAGCtgcaccagcagcagcaacagcagccccagcagcagcagcaacagcagcagcaatcTCATCACCAAATGCAGAATCATCAAAATGCACAGAACAGTGGACCGACCTCACATAACCAGAACGCCCAAAGGGATGACAACAAAGTCAAGGACGAAGGTGGCAGCTGTACCACCGAGCGCTGTAGCGATAATCAGGTTCACTGTCAAGTTCAATGCGATCTTCAGTTACAACCACCGCAAGACTTACAACAGAGCTTAatgcaacagcagcagcaacaacagcagcagcagcagcagattGGCGTGAATATAAGCGGGAATTCGTCGACGGAGGGTAGCAGCCAAAATAATTCGGAAAAAccggagaaggaaaaggagttGCGGCAGCTTAATATGACGCAatttcAAGTTCCAGACTTAAAACCAGGCGGTCATATGATGGACGTAAGAACAGCCGATGGTTCAGTAGTCAAAATAAGTGCGGGGAATGAACAAGACTTAGCTAAAACACTGGGTGTTGAAATGGTACAAAATATGTACAAGGTAAATGTCGAAGATATTAACCAGCTTTTAGCGTATCACGAAGTTTTCGGCAAATTGCAAAGTGAAATTGCGGCCGGTACTACTTTAGTAGGTAGTACGGTTCCTACGCAAACAGTTACCACGATTCAAAATGGTACGCCAATAGTGCAGCAAGTTCAGTTGAATAAATTTGACATAAAGACTAGCGATGGTGAAGCTACGCCGGGTCCAAGTGCATCGCCAGTTTCGGTCGGCAGTCATGCTTGTGAGATATGTGGAAAGATATTTCAGTTTCGTTACCAGCTTATAGTACATCGTAGATATCACACAGAAAGAAAACCATTTACATGTCAGGTTTGCGGGAAGGCATTTTCAAACGCTAACGATCTAACGCGTCACGGAAAGTGTCATTTGGGTGGATCGATGTTTACGTGCACTGTATGTTTTCACGTCTTCGCGAATGCACCTTCGTTGGAACGGCATATGAAAAGACACGCTACTGACAAGCCTTACAACTGTACGGTGTGTGGCAAGAGTTTCGCAAGAAAAGAGCATTTAGATAATCACACCCGATGCCATACAGGCGAAACACCATACAGGTGCCAATATTGCTCGAAGACATTTACCCGAAAAGAACACATGGTAAATCACGTGCGCAAACACACTGGTGAGACTCCACATCGATGTGATATTTGCAAGAAGAGCTTTACTCGCAAAGAACACTTTATGAACCATGTTATGTGGCATACAGGAGAAACCCCCCATCATTGTCAAGCCTGTGGCAAGAAGTATACGCGCAAAGAGCATCTCGCTAACCACATGCGTTCACACACCAATGACACCCCATTCCGCTGTGAGATATGCGGGGAGACGCCCTTCCGCTGTCAGTACTGTCCAAAAGCATTTACGCGGAAGGATCATCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGAGGAAGGAACATTTGACCAATCACGTGCGTCAACATACAGGCGAATCGCCACATAGATGCCACTTCTGCTCGAAATCATTTACTCGTAAGGAGCACTTGACGAATCATGTACGAATCCACACTGGCGAATCTCCGCACAGATGTGAATTCTGTCAGAGAACGTTCACCAGGAAAGAACATCTCAATAATCATCTCCGTCAACATACCGGAGATTCTTCTCACTGTTGTAACGTCTGCTCTAAACCATTTACGAGGAAGGAACATCTCGTAAATCATATGCGCTGTCATACTGGTGAACGTCCATTCGTATGCACGGAATGCGGCAAGAGTTTCCCATTGAAGGGTAACTTGCTCTTCCACATGCGTTCGCATAACAAAGGAAGCAACGCCGAGAGACCATTTCGTTGCGATCTCTGCCCCAAGGACTTCATGTGTAAAGGGCACTTGGTCTCCCACAGACGATCCCATTCGGACGAACGTCCACACAGCTGTCCAGATTGCGGCAAGACGTTCgtcgaaaaaggaaatatgtTGAGACATTTACGAAAACATGCATCCGAAGGCCCGCCAACGCAAGTCAGCACGCCTTCTGCTATTCCACAATCTGGAGTTTTACCTATACCGACCGCTGCAGTTTTGGTTGGACATCAATTAGCACCACCAGCTCCACCAGTTGTCCCACAACATACCGTAGTTGTACCAACACCACCCGGAGTTCTAGCATCCTATTAA
Protein Sequence: MNSEQHALPATTQAQQEDVNAGQSGRPSYPGGLATSTGLGNVGNTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSGGSGEASSKEPASSLNQEMALNSSSHHQSTSQSAHHHHQPSVSSSNHHGSMQSNSQIPVSLPGLNLDAHIPTSVSHLQAAHAQMQQQMQAQQQQLHQQQQQQPQQQQQQQQQSHHQMQNHQNAQNSGPTSHNQNAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQQQQQIGVNISGNSSTEGSSQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHASEGPPTQVSTPSAIPQSGVLPIPTAAVLVGHQLAPPAPPVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01066407;
90% Identity: iTF_00773969;
80% Identity: -