Pdor013230.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polistes dorsalis
Gene Symbol
PAXBP1
Assembly
GCA_010416905.1
Location
QUOG01000014.1:5030254-5043300[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-28 1.4e-24 86.9 1.7 1 272 538 748 538 750 0.93
2 2 0.1 7.5e+02 -0.8 0.0 41 93 1191 1243 1175 1252 0.83

Sequence Information

Coding Sequence
AtgtcattatttaataaaccaAAACGGAATATACGTCGGCGACCTTTCAATGATGAGGACGAAGATAATGAAAACAGGATGGAAATGGAAGATACTCAACCAGTCAAAGTAAAAGCTAAGAAGAAAGACAAGCCAAAACAAACGCTCCTTAGCTTTGGAGAGGAGCTAGAAGAAGCGGATGATGGAGAAGTTTTTAAGGTGAAGAAATCTTCGAGGAGCAAAAAACTGATGAAACAGCTAGATCacgaaaggagaaaaaagaaaggtgaaGAGAAAATGCAAGCGGACTCTGAGCAAGCAAACATGTCCATTAAACAGGAAAAAGATTTAGAAATAAAGACAGATGATCTAGTAgttaaaataaaaaataccgGACCACTGATTTTAAATGGAAGAGCTGCATTAGCAGCAGGCAAGGACGATTATACATctgatgaagaagatgaatcAGGTTCTCATAAATTTCGAAAATCTACAGATAAAGCTGATACGATGAAAATACTACTTGAGAGTGGTTGTATACCTGACGCTGCTATGATACACGCAGCTAGAAAACGTAGACAAAAGGCTAGAGAATTGGGTACTGATTATATTCCTTTAGATGAACAAAgTGATGAAAAGGGGAAGTCACGGTTAATTAGAGAAGAAGATCATGATAGAAGTGATGATGATTCTCAAGATCGTATTGATATGACTGTCAATACAGAAGCacgagataaagagaagaggagagaagcTTTTCTTGCATCACAGGTTTCAAGCAAACTTTCAGATGAAGAaagtgaaaatgaaaatgaagaagaagaatgggaAGCTCAACAAATTCGAAAAGGTGTTACAGGGGCTCAgATTGCAGCAGTTCATCAAGATTCTATGATACAACAACAATTTACGTTAGGATTAAATGTTAATCAAATGGTTGCACCTGGAGTACCATTAGAAATGGTTATGATGccagcaccaccacctccaccaacTATTCAACCACCAGATCCAACAAAAGTTGTGCCTGTTACACCCCAAgaagttattaataaaatgcgTGCAAGgTTGGATAGTTTAAAAGAAGTATATTCGCGTCATCAATTAGATCAACATCAACTTGAACAGGAATTAGTGCAGACTGTGAAAGAATTGGATGAAGGCGAAGCTCGTGCGCCGCAGCTTGCACAACGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCTTTGGTTATTGGATTGGAGCAACGCTGGCTGGATCTATATGGGGAACGTTCAATAGAACtaatggaaagaagaagacaagaTACGAGAGATCAAGCTGAAGAAATAACGACTGCAGCAAGAGGTCAAGCAATAAGGAGAGGTCCAGAAGTTGAAGCACGTATTCGTCGAGTTACAGAAAGAGAAGGTAGACGAGCACGTCGTAGAAGAGCTAGAGAATTAGCTCCAACATTACCGAAGCATATAGATGGCATGTCCAGTGACGATGAGGTCACTGAACAACAAAATCTTGCATTTAAGCAAGCTAAAgaGGAAATTGATAAAGAaggtaaagaaatatttgccGATGTAATGGATGATTATTGTACCTTGAGAGGTATTCTAACAAAATTGGAATTATGGAGAGAAACTGATATAGATGCTTACATGGAAGCTTACGTATCTTTATGTATACCTAAAATTTTATCACCTCTTATaagattacaattaataacCTGGAATCCTATCatggagAGTGCTGATATAGAAAGGACGAAGTGGTATAATACATTACTGTTATATgcattagataaaaaagaaacagaagatTCATTGAAACGAGATCCTGACGTAAGATTAGTACCGCTCACTGTTGAGAAAGTTGTAATACCTAAATTAACGGCTATTGTGGACAAAATTTGGGATCCAATGTCTACCTCGCAAACATTACGTCTTGTTGGTACAGTGAATCGACTTATTAGAGATTATCCAAATTTGAATGATACAAGCAAACCATTAGAATCATTATTTAATGCTATATTAGAAAAAGTCAAATCGGCTGTTGAAAATGATGTTTTTATACCAATTTTTCCTAAACAAATCTTGGATAACAGGCATCAATTTTTCCAACGACAATTTGCTATGGctgttaaattattaagaaatttattaagttGGCAAGGTCTTCTTGGAGACgctcaattaaaaaatttagcATTGGGCTCTTTATTAAATCGTTATCTATTAGCCGGCTTACGAGTCTCATCTGCaccagatgcacttttcaaagCGAATATGATTATGAGTACTTTACCACGAGCTTGGTTGCAAGGTGAAACAATAGAACATCTTAGAATGTTTGCCACTCTTATTCAACAATTGAGCGAGCAATTAGATCAAGCGAATCCTGCACATAaCATACAACCAATACAGGGTTTATTTACTCCAGAAAAGGAATATAGATATTTGTATAATGCTACCTCTAGTTCAGGTGTCCTATTACCATCAGGTGCTGCATCTTCATGGGGTTTAAATGGAATTCTTGTAATACAAGCAAAAGAAAATGCTGCAGTAATGCAGttgcaatcattgaaaatgaatatCTGGAATGGCAAAAtaggagaaaaaggagaagataTAGATATTAATGAAAGCGCTGCAGACCTTTTAATGCCTTTTGAAGTTACTTATAAAATGGGACTTGTAGAAAATTTTACTATACAAAATGAACCTGTTTGggtaacaaatataaaacgcAGTATAGTAGGCATATTACAATTGGATCTTTCTAATATAGAAAAGCAAGCAGCATTCCATTCTACTGAAATAAATCATTATGGTCAGTGTAACATAGAATATGTTATAAGTACCGAgaataatgatgaaaaaataattagaaaatctttAGATCCACGGACTTGTATAGGTCATCCCTTTCAATTTTGGACAAATGTTCCAAGAATGCAATGTCCTCATTCTGAACAAgATCCTATTTTAAAGTCCAGCGAAAGACTgtattatataagatataacaACACTGTACAAGATATTCTATATATCAATGCAACAGGAGGCATATATGTACAACCATTTCAAAGTTTCGGCGAagcacatttttcttttgcaaaGCAGAATCTTCAATTAATTACGGTACAAGACACAATAAATCCAATTTCATTGTACAATCCACATACCGTAACTTTGCAACACGAACTTCCAGAAGAAGATTTGACGCAAGGTAGAGGAATATTCGATAAAGATACTATTTTTAAAGTtATAGGAAATTTATTAGATCGATTAAGCCAAAGACTTGAAACTCCTGGTTTGGATACAGAAACAGATAATCTACATAATACAACTATTTCTACTCTTCTCTATTATCTTGGAATGTTAGATCGTACAGACTTAGAAATTGCATACAATAATACTTCAGGAACTAGTtacaaagaagaaacaatacgGAATATGTTTCTGGAAACACTTCCACAAATTGGAAGTAAAGAGTCTGCTTTGtttatattcgatttaattcaAAGCAGTAAAGTATCTGATATAACAGCGATACAGCTCTTAACTCAATTACCATTTCATATTCGGAAACCAGACGTACAATTATTAGTCAGTTTACAACCACTTCTGAGtttatcaagaaaaatttCTACAGAAATTCAGAATACAGCGATTCTTTCGTACGGCACattgatttataaaacatGTTTTGTGTCCTGCCCAACTGAAATGCTAGAAGATTATGTACGTCTCTATCTCGATAAATTCACAGaatGTACtgattatgaaaaaaagatgatatgGTTGGAAGGTTTGGCAAATATACAATTAGGAAGAGTAGTTGAATTTTTGGAACCTATCGCAAGTGGGAATAATGCAGAATCACGTCATTTTCGTGTACTTGCAGCTTGGGCATCTCTTCCATCTGCACCTTTCAGACCAGAGATTatatatccTGTATACTGGCCGATGTTGGTAAATAAAACGGAGCATTTAGAAATGAGAATAGCTGCATTgacattattaattgtttctaaTCCAACACCAAGTAGATTAATATCGTTGTATTGGTATATGCAAACTGAGCCAAATAagcatttatataattatttttatacaactCTAAAATCTATGGAGCAGACAACATATCCTTGTTATCTTcacatgGGAAGTATAGCAGCTCAATTTACACGTGTACTTCGTAAACCATCTAATGACGAACTGTTACTTACCggtaattatttgtttgacTACAAAGATTCATATAGAAAGTTTGGAGCCATGATTCATGGCATTGTTATAGCAAATCCTGCTACAAATATACCGGAAGCAATGCATGTTACTTTGAGTAATTATGGAAGTGGTACTACTTTAAATCATGTATCTttgTACATAAAAGCTGAAGGTCTTCTGCATTCCTTATCAACTTATCTTGAAAATCCAACATTAGTTAAAGATGTACTGGGTCGTTATAAATTAGATCAGAAAGAAACTGCACCAAtacatttagaaataattgcaCGAGTTCAACAGAAGACTGTTTTATGCTTAcatttaaatcaaatgaatattgcaaaaatagttaaatatGTAGCTTCGTTGCcagataatatatatcaaatttatcaaaatacagaatttcatattaatcaaCAACGAATCAATATTCCAATAACTATGGAATCAATACAAGTATCTGATATGGGTACAAGTGTAAGACTTGCCATGACAGCAACgtctttattttcaatgagaggaaattttattcattcggATATTGGACGTAATAATCATGTTATATTAAGAACATCCATTCATGGAAGTGAAACAATTTCAAACTACAATCCACTGGTTGATTTGTGGCACGCAGCAGAAAGAGCACAATCTATCCACGGATATCTTCCTATCAATGTTACAATTGGATTAAACGAGAGACCATTTATCACATATTATACACCAGGAgaagattttaaaatgggAATTACTGCTCATGTAAGAACAGTTACCAACATAAGAGGATTTAATGCTCAAAACAAGTTAAAACCTATTTGTCCTAATTGTCCAATATCGTATACAGTTAGGAAAGCATtaccaataaataaattaaagccaataaatttattggaaCTTGAATTTCCTGCATTgggaggaaaaatatttacaaaacttTTTGATTGCGAAAATGCAATATCACGAGAAAGAGTAATAAGTGATATATTATCGTCCCACCAAGCTAATTACCAaatttgGCCAGGCATGGAAGTAGTTTTGGCGGCGGTGcattttttagattattttacatatgtaCCACCAAAAGGTAGTTGCGGATTAACTTTTTATGTAGGACCATCTGATACATTTATGCAAACTCAAatAAAACTTGAatatgtgaaaaataaaaaacatcacATGTTATCTTTGACTAATCGTGAACTTCATTTTCAACGTATTTTGTATCAATGGAATTTAGCTGCTGTTTATGATATGACCAGCTGGATTTCAGACAGTCTTAAAATCAAAGCAACTCAAATTACACCTGATGGGAAAATAGTAAAGTTTTGTATCGAAGCTGATAGAGAAATGGACTGGGAATGGgactttttaaatgttaatccTGCTTCCCCTTCTAAACTAAAATTAGTTCTTGTTTGGGGACCATCTAATAGCGCTAAAGGTAAATGTAGTGGTACGTCAATATTATTCAATGTAATTGGCGAAGTTAGTAAAGAACAAATTGAAGAaagtcaaaaagaaaaatggccGTATGATCAGTGCCGTaaagatttggaaaaaaaaaattttgtaccATACACTGATACTTGTTATGAAACTTCAAAagaattatcaattttaaggaagtatcaaatttttcttaaatatgaaaatTTACCAGAGCCTTTGTCCAAAATCGTTTCGAAGTTAAGAGTTACATATGATCTACTTGGTGGAAATAGTCATTATACCAATAATTCtggacaattttttttaagtgcAGTCTTTCCTAAAGAATCTGAAAGTAGTGTACTGGAATTAGATTCAGACAAAGTGACTATacaatataattctaatttcataaacaattttttaatgcgAACACGAATCCATAAATATATAGACagtgttctttttcattcattttttaGCACATGTATTATAGAACCAAATATTGTACGATCAATTTACAATACCACAATTGTATTTAACTCtagcaaaaatattttattacttggTCAATGTTACGATGATAATCCAAGATTTGCTCTTAGAGCTTTAAGAAcgaacaataatttaataaatatacttattacCGATGAGACAGGTACAATAAAGATAGTTCAACATTTAAATGGAGGACATATATATAATGCTACATCATACGTACCGTTAGAAAAGTATACATATCAAAATTTTGGACCTAAATGGATAAAATTGCACGATCGGTCtgttgatatattatttcctaatattcttttatatatgcattGGACGAAACAACAAGTTGTCCTTTTTTTCCCAACTTATTTAACTGAATTCAGTTGTGGTATGTGTACAGTTAATAGCCTTGTTACAAGTCATATATATGAAGAATTATAa
Protein Sequence
MSLFNKPKRNIRRRPFNDEDEDNENRMEMEDTQPVKVKAKKKDKPKQTLLSFGEELEEADDGEVFKVKKSSRSKKLMKQLDHERRKKKGEEKMQADSEQANMSIKQEKDLEIKTDDLVVKIKNTGPLILNGRAALAAGKDDYTSDEEDESGSHKFRKSTDKADTMKILLESGCIPDAAMIHAARKRRQKARELGTDYIPLDEQSDEKGKSRLIREEDHDRSDDDSQDRIDMTVNTEARDKEKRREAFLASQVSSKLSDEESENENEEEEWEAQQIRKGVTGAQIAAVHQDSMIQQQFTLGLNVNQMVAPGVPLEMVMMPAPPPPPTIQPPDPTKVVPVTPQEVINKMRARLDSLKEVYSRHQLDQHQLEQELVQTVKELDEGEARAPQLAQRFRYYQELRGYVTDLVECLDEKLPLVIGLEQRWLDLYGERSIELMERRRQDTRDQAEEITTAARGQAIRRGPEVEARIRRVTEREGRRARRRRARELAPTLPKHIDGMSSDDEVTEQQNLAFKQAKEEIDKEGKEIFADVMDDYCTLRGILTKLELWRETDIDAYMEAYVSLCIPKILSPLIRLQLITWNPIMESADIERTKWYNTLLLYALDKKETEDSLKRDPDVRLVPLTVEKVVIPKLTAIVDKIWDPMSTSQTLRLVGTVNRLIRDYPNLNDTSKPLESLFNAILEKVKSAVENDVFIPIFPKQILDNRHQFFQRQFAMAVKLLRNLLSWQGLLGDAQLKNLALGSLLNRYLLAGLRVSSAPDALFKANMIMSTLPRAWLQGETIEHLRMFATLIQQLSEQLDQANPAHNIQPIQGLFTPEKEYRYLYNATSSSGVLLPSGAASSWGLNGILVIQAKENAAVMQLQSLKMNIWNGKIGEKGEDIDINESAADLLMPFEVTYKMGLVENFTIQNEPVWVTNIKRSIVGILQLDLSNIEKQAAFHSTEINHYGQCNIEYVISTENNDEKIIRKSLDPRTCIGHPFQFWTNVPRMQCPHSEQDPILKSSERLYYIRYNNTVQDILYINATGGIYVQPFQSFGEAHFSFAKQNLQLITVQDTINPISLYNPHTVTLQHELPEEDLTQGRGIFDKDTIFKVIGNLLDRLSQRLETPGLDTETDNLHNTTISTLLYYLGMLDRTDLEIAYNNTSGTSYKEETIRNMFLETLPQIGSKESALFIFDLIQSSKVSDITAIQLLTQLPFHIRKPDVQLLVSLQPLLSLSRKISTEIQNTAILSYGTLIYKTCFVSCPTEMLEDYVRLYLDKFTECTDYEKKMIWLEGLANIQLGRVVEFLEPIASGNNAESRHFRVLAAWASLPSAPFRPEIIYPVYWPMLVNKTEHLEMRIAALTLLIVSNPTPSRLISLYWYMQTEPNKHLYNYFYTTLKSMEQTTYPCYLHMGSIAAQFTRVLRKPSNDELLLTGNYLFDYKDSYRKFGAMIHGIVIANPATNIPEAMHVTLSNYGSGTTLNHVSLYIKAEGLLHSLSTYLENPTLVKDVLGRYKLDQKETAPIHLEIIARVQQKTVLCLHLNQMNIAKIVKYVASLPDNIYQIYQNTEFHINQQRINIPITMESIQVSDMGTSVRLAMTATSLFSMRGNFIHSDIGRNNHVILRTSIHGSETISNYNPLVDLWHAAERAQSIHGYLPINVTIGLNERPFITYYTPGEDFKMGITAHVRTVTNIRGFNAQNKLKPICPNCPISYTVRKALPINKLKPINLLELEFPALGGKIFTKLFDCENAISRERVISDILSSHQANYQIWPGMEVVLAAVHFLDYFTYVPPKGSCGLTFYVGPSDTFMQTQIKLEYVKNKKHHMLSLTNRELHFQRILYQWNLAAVYDMTSWISDSLKIKATQITPDGKIVKFCIEADREMDWEWDFLNVNPASPSKLKLVLVWGPSNSAKGKCSGTSILFNVIGEVSKEQIEESQKEKWPYDQCRKDLEKKNFVPYTDTCYETSKELSILRKYQIFLKYENLPEPLSKIVSKLRVTYDLLGGNSHYTNNSGQFFLSAVFPKESESSVLELDSDKVTIQYNSNFINNFLMRTRIHKYIDSVLFHSFFSTCIIEPNIVRSIYNTTIVFNSSKNILLLGQCYDDNPRFALRALRTNNNLINILITDETGTIKIVQHLNGGHIYNATSYVPLEKYTYQNFGPKWIKLHDRSVDILFPNILLYMHWTKQQVVLFFPTYLTEFSCGMCTVNSLVTSHIYEEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01089992;
90% Identity
-
80% Identity
-