Pdom000591.1
Basic Information
- Insect
- Polistes dominula
- Gene Symbol
- nfxl1
- Assembly
- GCA_001465965.1
- Location
- NW:3078554-3084556[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.7 8.1e+03 -3.9 1.3 15 19 126 130 125 130 0.81 2 19 0.14 6.8e+02 -0.5 0.8 4 10 161 167 160 167 0.95 3 19 5.5e-08 0.00026 20.0 15.1 1 18 175 191 175 192 0.98 4 19 3.6e-09 1.7e-05 23.8 12.0 3 18 230 245 229 246 0.95 5 19 0.43 2e+03 -2.0 1.2 5 10 270 275 270 275 0.94 6 19 0.1 4.9e+02 -0.0 14.3 1 17 281 305 281 308 0.71 7 19 0.00019 0.89 8.8 6.2 1 18 335 352 335 353 0.96 8 19 0.0068 32 3.8 7.6 1 12 387 398 387 398 0.94 9 19 1.2 5.7e+03 -3.4 1.7 6 10 408 412 408 412 0.97 10 19 2.2e-07 0.001 18.2 11.2 1 19 418 436 418 436 0.92 11 19 1.1 5e+03 -3.2 0.6 6 10 465 469 464 469 0.86 12 19 5.6e-05 0.27 10.4 8.9 9 19 484 494 482 494 0.91 13 19 0.00025 1.2 8.4 5.9 1 12 504 514 504 514 0.96 14 19 0.85 4e+03 -2.9 5.8 14 18 546 550 546 551 0.89 15 19 9.7e-05 0.46 9.7 3.8 1 12 587 598 577 598 0.91 16 19 1.6 7.7e+03 -3.8 3.7 15 18 611 614 610 618 0.54 17 19 0.0024 11 5.2 11.2 4 19 628 643 626 643 0.92 18 19 2.3e-06 0.011 14.9 10.2 1 16 688 702 688 708 0.89 19 19 1.4 6.5e+03 -3.6 0.6 6 10 738 742 737 742 0.86
Sequence Information
- Coding Sequence
- ATGCAAAAGTTTAAGCAAGCtcaagtagaaaataaaatgtctatTAGACGACATTTAGAAGCGATTGCTTCTCTTGATTCGAGTAGTGAAGACGAAGACATTATATGTGAGGAAGATATACAAAGGACGTTAGATGAAGTTTTATCAGCTTATAATGGTGAACGTTTAAACACAGAAAAGATTATGTCGTAtttgattaacatttttcaatctGGTGGTGCTATATGTTTAATATGTATTTCAACAGTAAAAAGAACAGATCCCATATGGAActgttataaatgttattctttTATGCATTTGACGTGTATTTTACATTGGATACGAGATACTCTAGCCCATAAACATGAACAAGGAATTAAACCAACTTGGACGTGtcCAAAATGTAGAGCAGaatatgaagaagatgaaattcCAAAAGTCTACAAATGTTTCTGCAACAGCGTTGAAAATCCGTCTAATCAAACATGGATTGTTCCGCATTCTTGTGGAGAAACTTGTGGGAAATATTTGGAACCTAACTGTGGAcataaatgtgtattgttaTGTCATCCTGGACCATGTCCACCTTGTGCAAAAACGGTggtaattaattgttattgtgGAAAGCAGCCTGCCCGTCCATTGCGATGTAATATAAGTGGTTGGAGTTGTAATAAcatatgcaataaaaaatacgatcgATGTAACCATACTTGTAAAGAAATTTGCCATGCTGGAGATTGTCCACCATGTATGGAAATTCTACTAACGGATTGTCGTTGTAAAAGTAGTaggcaaaagaaaaattgcaatGAAGTTACTTGGACTTGTAATAAGCCTTGTAATAGGCTATTGTCTTGCAAAATACATACCTGTGAAGGTATTTGTCATTCTATTAACGATTGTGGAGATTGTCCAAAGAAATTTAGAACTTGCCCCTGTGGTAAAAACCGATATACAGTTTCATGTAAGGAACAACAATTACTCAAATGTGGAAATACTTGTGGAAAATTACTAAATTGTGGTTTACACTTTTGCAACATGACAtgtcattttgaaaaatgcgGTCAGTGCTTGGAGATGGTCAGAAAATCGTGTAGATGTGggaattttacaaaagaaatagcTTGTGGGAAAGAATTTcactgtaataaaaaatgtactcAAAAAAGACTTTGTGGAAGACATCTgtgcaataaaaaatgttgCGATTGTTTAGTAAAAAATACCTTTAATATATGTGAAAAAGTATGCAACAATCTTCTTAATTGTCAGAAACATAAATGTCTAGCAGCTTGTCATAGTGGACCTTGCTACCCATGCTCTCGTTCTGATATAATTCAATGCAAGTGtggtaataaaaagataatagtaCCTTGtggaagcaaaagaaaaattaaaccaCCACATTGTAATAAACCATGTAAAGTACGCTCTATTTGTATTCATCCTGAGAGAGAGATCCATAAGTGTCATCAAGGTCCATGTCCGCCATGTAAGAAAATTTGTGgtttaattcataaaaaatgtGGACATAAATGTTTAGCTGTTTGTCATAGTAAGGTTTGGGTCAAAACGAGCTTAAATAGTATACAAGGAGAGCCCAAAGGTCcatgggaaaaagaaagatatatgatGGAATTAAAAACATTGCCTTGTCCCCCTTGTGAATTTCCTATTGAAGTAGAATGCTTAGGTGGACACGAAACACGTACATTGCCTTGTTATATCGCTAAAGCCGATTCTTGTGGAAGACCATGTGGTCAGTTACTAGAATGTACAAATCACACTTGCGAATTAATGTGCCATGATGTAAAATCATCAGAAGGAATGATTGGTAATACACAATGTATGCCATGTGAAAGACCATGCTCGTTTGCACGTCCCAAAGAATGTTTGCATAAGTGTTTAAAATCTTGTCATCCCGCACCATGCGACTTATGTCAACAATTAGTACGTATTTCTTGCCATTGTGGCatcagtattttatatagacGTTGCATAGATCTAACATCCGCAACAGTCAAGCAACGCGAAGAGCTGTTAAAGTGTGGAAATCAATGcccaaaaaatTATCCATGTGGTCATAGGTGCAATGATATTTGTCATCCTGGATTATGTAAAAAGCCAGATGCATGtaataagaaagtaaaacTATGGTGTAAATGTAAACGCATTAAAAAGGAATATGTTTGTTCTGttatacaagaaaagaaaattgtagtTGAATGTGATAGTGTTTGTCAGTCacttattaatgaaaaagataaagctaacaaaatcaaagaaatacAACGTAAACGCGAAGAAGAATTACGTAATCAGGAAGAAATCGAAAAATtccaaagaaaatttaaaccaCGACGAAAAGCAAaggataaattgaaaaaagaattagcgAATTCAAACGAGGAAAATAGTAAAACATTCATATTGGTTTTGATAACAACCATTTCTATAGctattataagtattattgtaatttatgcTAActtaagttaa
- Protein Sequence
- MQKFKQAQVENKMSIRRHLEAIASLDSSSEDEDIICEEDIQRTLDEVLSAYNGERLNTEKIMSYLINIFQSGGAICLICISTVKRTDPIWNCYKCYSFMHLTCILHWIRDTLAHKHEQGIKPTWTCPKCRAEYEEDEIPKVYKCFCNSVENPSNQTWIVPHSCGETCGKYLEPNCGHKCVLLCHPGPCPPCAKTVVINCYCGKQPARPLRCNISGWSCNNICNKKYDRCNHTCKEICHAGDCPPCMEILLTDCRCKSSRQKKNCNEVTWTCNKPCNRLLSCKIHTCEGICHSINDCGDCPKKFRTCPCGKNRYTVSCKEQQLLKCGNTCGKLLNCGLHFCNMTCHFEKCGQCLEMVRKSCRCGNFTKEIACGKEFHCNKKCTQKRLCGRHLCNKKCCDCLVKNTFNICEKVCNNLLNCQKHKCLAACHSGPCYPCSRSDIIQCKCGNKKIIVPCGSKRKIKPPHCNKPCKVRSICIHPEREIHKCHQGPCPPCKKICGLIHKKCGHKCLAVCHSKVWVKTSLNSIQGEPKGPWEKERYMMELKTLPCPPCEFPIEVECLGGHETRTLPCYIAKADSCGRPCGQLLECTNHTCELMCHDVKSSEGMIGNTQCMPCERPCSFARPKECLHKCLKSCHPAPCDLCQQLVRISCHCGISILYRRCIDLTSATVKQREELLKCGNQCPKNYPCGHRCNDICHPGLCKKPDACNKKVKLWCKCKRIKKEYVCSVIQEKKIVVECDSVCQSLINEKDKANKIKEIQRKREEELRNQEEIEKFQRKFKPRRKAKDKLKKELANSNEENSKTFILVLITTISIAIISIIVIYANLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01232705; iTF_01235402; iTF_01234709; iTF_01234038; iTF_01513850; iTF_01513156; iTF_01515172; iTF_01512531; iTF_01090371;
- 90% Identity
- iTF_01234709;
- 80% Identity
- -