Pdom001179.1
Basic Information
- Insect
- Polistes dominula
- Gene Symbol
- pnr
- Assembly
- GCA_001465965.1
- Location
- NW:1534047-1598139[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-18 3.7e-15 54.3 3.2 1 34 162 194 162 196 0.97 2 2 2e-19 2.7e-16 58.0 5.8 1 35 221 254 221 255 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGTGGCGGGTACGGCGCAGGCTCCGACTATCAGCAACAGTctcagcaacaacaacagcaacatgGACAACAACTGCAAGCCCCCGTTTACGTACCTTCGTCCAGACCAGCAATCCCTTCTGCAGCCACGGCAGCACAATATCATTCCTTCGCTGGTTCTGCATCACCTGCCTGggaGAAAACAGCGTCCTGGCAACATGGCGTCGAAACATACGCTGCTCATCATGCATTGGCTGGTCACACGAGTGCTTCCAGTGCAACGATGGGTCCACACACGGGACATGCTCATCCTCATGCTGGCCACCCTCACACGGCACACCCTCATTCTACCCTTGCAGCGGCTGCACCATTTTATGCCCAAAACGTTGCGATGATGTCCTCATGGCGTGCTTATGATGGTGCTGGTTTTCAACGTGCTTCGCCATATGacacGGCGATGGATTTTCAATTTGGCGAGGGTAGAGAATGCGTCAATTGCGGAGCAATTTCTACGCCGTTGTGGCGGAGGGACGGTACCGGTCATTATCTTTGTAACGCATGCGGGCTTTATCACAAGATGAACGGTATGAATCGACCGCTCATCAAACCATCAAAACGCCTGATATCTGAATTTCAGACGGCAACGAGACGGCTAGGATTATGCTGCACAAATTGTGGTACAAGAACAACTACATTGTGGAGGCGTAACAACGATGGTGAACCGGTGTGCAATGCATGCggattgtattttaaattacacgGTGTTAACAGACCATTGGCAATGCGAAAGGATGGAATACAAACGCGTAAAAGAAAACCGAAAAAAACGCCAGAACCAAATGCTAGATCCAATACGACGGAACACGAAACTACAGCGTCTAGTACGTCATCACCATCGATGGGTTGGTTTTACAATTTgacgaatttttttaatttaaaactaaataagcacacatattattatctttggaataaaatgaacaaattgatCACGATTGTTAACAGATCCTAA
- Protein Sequence
- MFHGGGSGGYGAGSDYQQQSQQQQQQHGQQLQAPVYVPSSRPAIPSAATAAQYHSFAGSASPAWEKTASWQHGVETYAAHHALAGHTSASSATMGPHTGHAHPHAGHPHTAHPHSTLAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARSNTTEHETTASSTSSPSMGWFYNLTNFFNLKLNKHTYYYLWNKMNKLITIVNRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01214468;
- 90% Identity
- iTF_01515156;
- 80% Identity
- -