Pors005539.2
Basic Information
- Insect
- Platygaster orseoliae
- Gene Symbol
- pnr
- Assembly
- GCA_030522825.1
- Location
- JAPYZL010018793.1:1-11702[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9 2.8e+04 -3.6 0.0 8 15 69 76 68 78 0.81 2 3 2.7e-18 2e-14 54.5 3.2 1 34 166 198 166 200 0.97 3 3 7.3e-19 5.2e-15 56.4 5.2 1 35 225 258 225 259 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACTCGAGCGGAAGCGGTGGCTACGGCGCGGGTTCCGATTACCAGCAGCAATCccagcaacagcaacaacaacagCAACAGCACGGGCAGCAACTCCAGGCGCCGGTTTACGTGCCGTCCTCGAGGCCCACCATCCCCTCGGCAGCCGCGGCCACGCAGTACCATTCTTTTCCTGCTTCCGCTTCGCCTGCTTGGGAAAAAACAGCGTCGTGGCAGCACGGTGTAGAGAGCTACACGCATCATGCGCTAAGTGGTCACGGGGGTGCGAGCGCAGGTGGCATGGGGCCTCACGCGGGGCACACGCATCCTCACCCGGGTCACCCGCACGCCGCGCACCCACATTCCTCGCTTGCCGCCGCGGCGGCTTCACCTTTTTATGCCCAAAACGTCGCAATGATGTCCTCTTGGCGTGCCTATGACAGCGCTGGATTCCAAAGGGCATCTCCTTACGACACGGCGATGGATTTCCAGTTTGGCGAGGGCAGGGAGTGCGTTAACTGCGGTGCTATCTCGACGCCTCTTTGGCGAAGAGACGGCACCGGGCATTACCTCTGCAACGCTTGTGGCCTTTACCACAAAATGAACGGTATGAACCGGCCGCTCATCAAACCCTCCAAGAGACTCGTCTCTGAATTCCAGAATGCAACTAGGCGATTGGGGCTGTGCTGCACCAACTGCGGAACACGTGCGACAACGCTTTGGAGGCGCAACAACGAAGGCGAACCGGTGTGTAACGCGTGCGGCTTGTACTTCAAGCTCCACGGCGTCAACAGGCCCTTGGCAATGCGCAAGGACGGCATCCAGACGCGGAAGCGGAAGCCCAAGAAGACGCCGGAACCAAGCGCGAGGCCGTCCATCGGAGAACACGAAACCGCGGCTTCGGTCACGTCGTCGCCTACCAATG
- Protein Sequence
- MFHSSGSGGYGAGSDYQQQSQQQQQQQQQHGQQLQAPVYVPSSRPTIPSAAAATQYHSFPASASPAWEKTASWQHGVESYTHHALSGHGGASAGGMGPHAGHTHPHPGHPHAAHPHSSLAAAAASPFYAQNVAMMSSWRAYDSAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSEFQNATRRLGLCCTNCGTRATTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPSARPSIGEHETAASVTSSPTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01233313; iTF_01514507;
- 90% Identity
- -
- 80% Identity
- -