Basic Information

Insect: Polistes dominula
Gene Symbol: gtf3a
Assembly: GCA_001465965.1
Location: NW:1136720-1143243[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 5.4e-05 0.0033 16.9 0.0 2 23 744 765 743 765 0.97

2 17 5.5 3.3e+02 1.2 0.8 1 19 771 789 771 790 0.91

3 17 0.34 21 5.0 1.2 2 23 798 819 797 819 0.95

4 17 5.6e-05 0.0033 16.9 1.2 3 23 828 849 827 849 0.98

5 17 0.013 0.8 9.4 2.5 1 23 856 879 856 879 0.95

6 17 6.4e-05 0.0038 16.7 0.7 1 23 885 908 885 908 0.94

7 17 0.44 26 4.7 0.9 2 23 916 936 916 936 0.94

8 17 9.4e-08 5.6e-06 25.6 2.1 2 23 942 963 941 963 0.97

9 17 5.8e-06 0.00035 20.0 0.2 1 23 969 991 969 991 0.99

10 17 0.00043 0.026 14.1 2.6 2 23 1003 1025 1002 1025 0.95

11 17 0.0017 0.1 12.2 1.8 1 23 1031 1054 1031 1054 0.95

12 17 0.022 1.3 8.8 3.1 2 23 1075 1097 1074 1097 0.95

13 17 0.00018 0.011 15.3 1.5 2 23 1104 1126 1103 1126 0.96

14 17 2.4e-05 0.0014 18.1 1.1 2 23 1134 1155 1133 1155 0.96

15 17 0.00082 0.049 13.2 2.3 1 23 1161 1184 1161 1184 0.96

16 17 0.22 13 5.6 3.2 2 23 1191 1212 1190 1212 0.96

17 17 0.0065 0.39 10.4 2.6 1 23 1218 1240 1218 1240 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	5.4e-05	0.0033	16.9	0.0	2	23	744	765	743	765	0.97
2	17	5.5	3.3e+02	1.2	0.8	1	19	771	789	771	790	0.91
3	17	0.34	21	5.0	1.2	2	23	798	819	797	819	0.95
4	17	5.6e-05	0.0033	16.9	1.2	3	23	828	849	827	849	0.98
5	17	0.013	0.8	9.4	2.5	1	23	856	879	856	879	0.95
6	17	6.4e-05	0.0038	16.7	0.7	1	23	885	908	885	908	0.94
7	17	0.44	26	4.7	0.9	2	23	916	936	916	936	0.94
8	17	9.4e-08	5.6e-06	25.6	2.1	2	23	942	963	941	963	0.97
9	17	5.8e-06	0.00035	20.0	0.2	1	23	969	991	969	991	0.99
10	17	0.00043	0.026	14.1	2.6	2	23	1003	1025	1002	1025	0.95
11	17	0.0017	0.1	12.2	1.8	1	23	1031	1054	1031	1054	0.95
12	17	0.022	1.3	8.8	3.1	2	23	1075	1097	1074	1097	0.95
13	17	0.00018	0.011	15.3	1.5	2	23	1104	1126	1103	1126	0.96
14	17	2.4e-05	0.0014	18.1	1.1	2	23	1134	1155	1133	1155	0.96
15	17	0.00082	0.049	13.2	2.3	1	23	1161	1184	1161	1184	0.96
16	17	0.22	13	5.6	3.2	2	23	1191	1212	1190	1212	0.96
17	17	0.0065	0.39	10.4	2.6	1	23	1218	1240	1218	1240	0.98

Sequence Information

Coding Sequence: atgcaGAATTCAACTAAGCTTAATAGAGATCATGATTATGGAGAATTAATGACAGAAAATCATGATTATATGAATAGCAGTGGTCAGAAAGatatgttagaaaataatttattaaaaaccaTTTTGAAACCTATTAGGGTATCTTCTTtgacaataaataaagatactTTAGGTGGACAAGTTAaggatataaatgaattaaaaaaaataacacctCGCGTGAAGCTATTGGCTCACGATGTAAATAGTTTGAAGGAATTAACTAAAATTTCTTTGCAAAGTAAATCATTAGAATCAGACAAAATTCAAATGTATGAAAATACTaaggaagaattaaaaaagtacTGCCGAACTTGTGCCGGTTTGAAATTTCCTTTGGTTGATATCTTCAGTGAAAAAGGTATTCAAATGAGGCTAAGTCAACAGATCAAACATTTAGAAGAAATTAATTCTCAAGACAGTTTGTCTACTCAAATGTGTATGGATTGTATTTGCGATTTAAAAATGAGTTATAAGTTTTATATGCAAATTAAAAAAgctgaaattaaattaaaatcgcTTTATGTTACATTAACTGACACAATTGCACGTAACATAGAAGCGGATAAATTACAATCTTTAACTAATAGTCAAAAGATAGTAGAAGAAATTGATGATTGTTCTATGGTGCCCATATCAACGAGCACTGACAACGAAGAATTTGTTCCAAAAATATCTgctatttattcattaaaaaatgaaaaatcatcaaCTCCGGAAAGagaggataaaaataattctgatGTAACATGTAAAATGCAACCTGATATTTTTGAAGACGTTGCAGAAGATCAACATCAAAGCGATGATAATGAATCTATCGAAGAATTTGATCCGGATGATCCCCCATTTCAACCTGATAGTTCGGATGCTGCAGAATCTGATGATGAAATTGAAAACAGTCACACGGATAAAAGACGAAATACGCCTAAAAAGGATAAtacaagtaaagaaaataatcaatcttTTCTGTTACAAAATTCGTCGGGTAGTAATTTGATGCAGAGTCAAGATGATGCAAATCAAGATTCCAATCAaactgtatataaatatgatatggCATTAAAGGCATACGTTAAATTAGATACTCCACAAGacaatttaaattctaaatttcaaattaatcagaagattgatataaaaaatgatgaatttggGAAAGATGCTCCGAAGCaaccaaatatattaaaacgcAGACTTTTGCAGCAAACAAAAAAGgatcatttagaaaataatgatgaatCCAAATGTTCTAATACATCAGACATTATTGAAAATTCGAAAGATTCTAAAATTCCAAAATTAGATATGCAAAATCctttaaatattaacgatACCCAAGAAGATGGAATTATGTACGTCACTGTGAAAGGTTCTAAacctaatgaaatattattagtaaaggttaaaaaaatggataaaccatttgaaaaaaaggacgaaaaaaatgtaactaaaATAAAGTCATTTGATTTTAAGCCGGTTGGTAAAATTTTAAAGAGATATGAAGCTTTAgcgacaaaagaaaagaatttatttacagAACGTTCTAAAAAATTGGacaaaagagaacaaataatagaagagcaaatagaagaatataagaaaaaacgtGAAAAAGTTTTgggtaataaaacaaatttatcaattaaaaatgatgatactCAAAGTCGATATGCAAAACGAGTAGAAAGTTCTGACGATCAAAAAGCTCATATATACGAAGAAAGTAATTCTAATTTAAAGGTAGAATCTGACGTTGATAGTAGTACTATGAATAGTACTATTTTAAAAGGAGAGAATGCTTCAGATGTTTCAGATTCTCAACAGGATCAGTCGGTTTCAGAGAAGGCATATGTGAACACGAAAGAGTATTTATCACGTTTGGCTAAACTTAAGTTAAAATGGGAAGAggcgaaaaaaaagaaagaatatttacaaaaagaaattgatcaaTCTTACACAGAGGGAAACATGGAAAAATTATCACGCATTTTaggagaaaaagacaaaaatttactagaatttcaagattatttaaaacaaagaaaaatagttattACCAGATTAAAAGATGAAGACATTATTTCCCTTTACGAAGATAGAAATAACACGTCTCTTCAAAAAAGTTTACCCGATTTGATCGATGAAACAACACCAGCTGATTATATACCTGAGGAAAATTATTTAGAGTGTGATTATTGTCCTGAAACATTTGCTTCTAAGGAAGTATTAGAAGATCACATAAAAATgcatgattataaaataatgcattACTGCGAAGATTGCATGGAAGAATTTCCTAcaaataaagcaaaaaaaaatcataatgtaatatgttataaaaaattagtatgtaaatattgtaatacaatCTTAGattcgaaaggaaaaaagaggcAGCACGAACAGAAACATTGCGATAATGAGTTTGGTCAATTGTGCGATGTTTGTGGTGAAAAATTCAAACATCAGGGGACCCTAGATCAACATATTAAAACGCAACATATGAAGtgggaaaaaatatttgaatgtaCTAAATGTCCGAAAAAATTTGCGTTCAAACAAAAGTTgagttttcatttaaaatctgTCCATACAACGTTGAGAGCTTATTTGTGTGAAGATTGCGGGGCAGACTTTAAAAATCCTGCCAGTCTGAGACATCACCGTATTCGTAAACACCAACCTGTAGGGAACAAAAGAGAATGTCCAGTTTGTCATAAATTAGTACCATTTTATAGCCTTTCTAAACATATGTATACTCACAAAGCCTATACTATACAATGTCCACATTGTGATAAGATGTTTAAAAATAGTTCTACATTAAAACAACATGTAAGAATACATGAAGATCAACGACAATATCGCTGTGATACTTGCGGTGTTGGATTTAATAGGAGGGATGGATTAAGACTTCATCTGAGAGTTCATGAAAAATCTGATAGTAGAGGATTAAAAGAATGCTCGTGCCAAGTATGTGGCGAAAAATTCCCAAATCATTCTACTTTAGTTATACATAGAAATCGCGAACACAAAGATGGAAGACAATTTACATGTCACATATGTAATAGATCTATGATTTCAGCAAGATCATTAGAATGGCATATGTCTCATATACATAACGAATTGATTCCTGGCCTTGTAAAAGAAAGTGTTGATGgtttacaagaaaaaagagtTTCTTGTTATCATTGCACGAAAACTTTCAAAACAGAAATGATCTTAAGaacacatattaaaaatactcatATGGAGAAAGACCCTATGAAGTGTTTGGATTGCGATATGACATTTACTTCTGAAGTTAGATTAAGGCATCATATGATGGTAACTCACAATAGGCTGGAAGGCACATTAGTGTGTCCTCATTGTCCAAAACGATTTGTAAATCAGCTTAGGTTAAAAACTCATATGATATCTCATTCTGAGGAAAGACCGTATACGTGTGAAATATgtggatttaatttaaagactAAGATACAGCTAATCAAGCATCATCAGAACAGACATAGCGATGAAAGACCTTTACAATGTAGATACTGTCCGTGGAGGTGTAAACAAGTAAGCGCACTTGTTTGTCATGAAAGAACTCATACAAATGAACGACCTTATTCGTGTAGTGTTTGTAGACAACGTTTTAAGTATTTGGGTGATAAGAACAAACATGAAAGGCGTCATGAAAGTTTAGGTGGATCTGGATTTAAACGAATAGTACCTGGAAGAAATATTAAGCACTCTAAAGTTCAAGGAGAAACTTCAGGTTctgaacaagaacaagaacaagagcAAGAGCAAGAAGAATTAACGCACGTAGATTCGCAACTTACAGAAAGCCAATATGAGGAACAATCGTGTCAACCGTTTGAAActaaatttatcaaagaagAAATCGTTAAATTTGAAGAACCTGAAATTCCAGAAGAATATGAGCAAGTTTATGAACAGGATTATGAAGAAACATCGAGAGAAGCTTCTGAAGCTACCGAAGTTATCATGAACATGGAAGATACCACTGTATACACGGAAGAGGTAACTGCAGACAACATTGAGTCAGCAGAAATAATGGCAAACGAAATGATGACTAATGAGATTTTACAAAGTGGAACGGTAGTTCATTTGCAACAACAAGATGACAATGGAAAAATTCAAGTTATTCCTGTTATGCTATCTTTGCCTGATTTGTCTGACACAAATACCGAAGTCAATTTAGCGACAGCATCAATAATATATGACAATTAA
Protein Sequence: MQNSTKLNRDHDYGELMTENHDYMNSSGQKDMLENNLLKTILKPIRVSSLTINKDTLGGQVKDINELKKITPRVKLLAHDVNSLKELTKISLQSKSLESDKIQMYENTKEELKKYCRTCAGLKFPLVDIFSEKGIQMRLSQQIKHLEEINSQDSLSTQMCMDCICDLKMSYKFYMQIKKAEIKLKSLYVTLTDTIARNIEADKLQSLTNSQKIVEEIDDCSMVPISTSTDNEEFVPKISAIYSLKNEKSSTPEREDKNNSDVTCKMQPDIFEDVAEDQHQSDDNESIEEFDPDDPPFQPDSSDAAESDDEIENSHTDKRRNTPKKDNTSKENNQSFLLQNSSGSNLMQSQDDANQDSNQTVYKYDMALKAYVKLDTPQDNLNSKFQINQKIDIKNDEFGKDAPKQPNILKRRLLQQTKKDHLENNDESKCSNTSDIIENSKDSKIPKLDMQNPLNINDTQEDGIMYVTVKGSKPNEILLVKVKKMDKPFEKKDEKNVTKIKSFDFKPVGKILKRYEALATKEKNLFTERSKKLDKREQIIEEQIEEYKKKREKVLGNKTNLSIKNDDTQSRYAKRVESSDDQKAHIYEESNSNLKVESDVDSSTMNSTILKGENASDVSDSQQDQSVSEKAYVNTKEYLSRLAKLKLKWEEAKKKKEYLQKEIDQSYTEGNMEKLSRILGEKDKNLLEFQDYLKQRKIVITRLKDEDIISLYEDRNNTSLQKSLPDLIDETTPADYIPEENYLECDYCPETFASKEVLEDHIKMHDYKIMHYCEDCMEEFPTNKAKKNHNVICYKKLVCKYCNTILDSKGKKRQHEQKHCDNEFGQLCDVCGEKFKHQGTLDQHIKTQHMKWEKIFECTKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCHKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHLRVHEKSDSRGLKECSCQVCGEKFPNHSTLVIHRNREHKDGRQFTCHICNRSMISARSLEWHMSHIHNELIPGLVKESVDGLQEKRVSCYHCTKTFKTEMILRTHIKNTHMEKDPMKCLDCDMTFTSEVRLRHHMMVTHNRLEGTLVCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNIKHSKVQGETSGSEQEQEQEQEQEELTHVDSQLTESQYEEQSCQPFETKFIKEEIVKFEEPEIPEEYEQVYEQDYEETSREASEATEVIMNMEDTTVYTEEVTADNIESAEIMANEMMTNEILQSGTVVHLQQQDDNGKIQVIPVMLSLPDLSDTNTEVNLATASIIYDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01512335;
90% Identity: iTF_01232545; iTF_01234513; iTF_01235190; iTF_01233822;
80% Identity: -