Basic Information

Insect: Polistes canadensis
Gene Symbol: znf423
Assembly: GCA_001313835.1
Location: NW:8503-58933[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 5.9e-06 0.00037 19.9 1.5 1 23 145 167 145 167 0.98

2 22 0.091 5.7 6.7 4.3 1 23 173 195 173 195 0.98

3 22 7.7e-07 4.8e-05 22.7 4.1 1 23 201 223 201 223 0.99

4 22 0.00016 0.0099 15.4 0.2 1 23 229 251 229 251 0.99

5 22 0.0021 0.13 11.8 2.0 1 23 407 430 407 430 0.96

6 22 0.098 6.1 6.6 0.0 2 23 441 463 440 463 0.88

7 22 0.29 18 5.1 0.1 3 23 526 546 525 546 0.97

8 22 0.00036 0.023 14.3 0.3 1 23 558 580 558 580 0.96

9 22 0.0058 0.36 10.5 0.4 1 23 589 612 589 612 0.93

10 22 2.7 1.7e+02 2.1 0.2 1 23 617 640 617 640 0.91

11 22 9.8 6.1e+02 0.3 0.2 10 23 672 686 671 686 0.93

12 22 0.22 14 5.5 0.5 2 23 714 735 714 735 0.96

13 22 0.0039 0.25 11.0 0.3 1 23 740 763 740 764 0.94

14 22 2.4 1.5e+02 2.3 0.1 2 23 828 851 827 851 0.81

15 22 1.9e-05 0.0012 18.3 1.1 2 23 868 890 867 890 0.97

16 22 0.78 49 3.8 0.6 1 12 899 910 899 922 0.76

17 22 9.2 5.7e+02 0.4 0.1 2 23 930 951 929 951 0.94

18 22 0.0013 0.081 12.5 0.2 2 23 1114 1136 1113 1136 0.96

19 22 0.62 38 4.1 0.3 1 23 1147 1170 1147 1170 0.93

20 22 2 1.2e+02 2.5 0.4 2 23 1183 1204 1182 1204 0.93

21 22 0.04 2.5 7.8 0.0 2 23 1213 1235 1212 1235 0.93

22 22 0.079 5 6.9 3.1 1 23 1242 1265 1242 1265 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	5.9e-06	0.00037	19.9	1.5	1	23	145	167	145	167	0.98
2	22	0.091	5.7	6.7	4.3	1	23	173	195	173	195	0.98
3	22	7.7e-07	4.8e-05	22.7	4.1	1	23	201	223	201	223	0.99
4	22	0.00016	0.0099	15.4	0.2	1	23	229	251	229	251	0.99
5	22	0.0021	0.13	11.8	2.0	1	23	407	430	407	430	0.96
6	22	0.098	6.1	6.6	0.0	2	23	441	463	440	463	0.88
7	22	0.29	18	5.1	0.1	3	23	526	546	525	546	0.97
8	22	0.00036	0.023	14.3	0.3	1	23	558	580	558	580	0.96
9	22	0.0058	0.36	10.5	0.4	1	23	589	612	589	612	0.93
10	22	2.7	1.7e+02	2.1	0.2	1	23	617	640	617	640	0.91
11	22	9.8	6.1e+02	0.3	0.2	10	23	672	686	671	686	0.93
12	22	0.22	14	5.5	0.5	2	23	714	735	714	735	0.96
13	22	0.0039	0.25	11.0	0.3	1	23	740	763	740	764	0.94
14	22	2.4	1.5e+02	2.3	0.1	2	23	828	851	827	851	0.81
15	22	1.9e-05	0.0012	18.3	1.1	2	23	868	890	867	890	0.97
16	22	0.78	49	3.8	0.6	1	12	899	910	899	922	0.76
17	22	9.2	5.7e+02	0.4	0.1	2	23	930	951	929	951	0.94
18	22	0.0013	0.081	12.5	0.2	2	23	1114	1136	1113	1136	0.96
19	22	0.62	38	4.1	0.3	1	23	1147	1170	1147	1170	0.93
20	22	2	1.2e+02	2.5	0.4	2	23	1183	1204	1182	1204	0.93
21	22	0.04	2.5	7.8	0.0	2	23	1213	1235	1212	1235	0.93
22	22	0.079	5	6.9	3.1	1	23	1242	1265	1242	1265	0.97

Sequence Information

Coding Sequence: ATGTCCAGAAGAAAGCAGGCGAAGCCACGATCCTTAaaacGGGACGAAGAGTGGGATGATGCCAACGAACAGAATGTCCTGGAGGCGTCTGAACAGGATAACGAAACTGCTCCGATTAAACcCGAGGATgaagacgaggaagaagaagaagaattacaaCGAGCTTTTAGTCGACATTCCGAAGATTATTTGCAAGACGGTAGACCATCGTCCGTACAGGGGCCAGATCTGGAAAATCAGAATAGCCTCGACAGCGAGGCTTTGGGTACCGGAAGTTCCTCTTGGCACAGCGAAGATGGCGGACCAAGTTCtcgaagaggaagagaaacgcCATCCTCTTGCGCTACGCCAACTTCTGCCAGTTTTCCGTCGGAGCCAGAAATCGATGGGGAAGTTGGAATTGGTACCGACGGTAACAATCCAACTGCACCTTATCCTTGCCAATTCTGTGATAGGACTTTTCCACGATTGAGTTATCTCAAGAAACATGAACAAAGCCACGGTGACCAAATGCCGTACAGATGCAGTTGGTGTGAGAGATTGTTCAAGCATAAGCGGAGCAGAGATCGTCATGTGAAGCTGCACACAGGGGATAGAAGATATCGGTGTTCTCATTGTGAGGCAGCCTTTTCTAGGAGcgatcatttaaaaatccaCATGAAAACTCACGACACACAAAAGCCATACCAGTGTACAGCGTGTTCAAGAGGATACAATACAGCAGCCGCATTGACTTCTCACATGCAATCGCATAAAAAACATCACCAAGGAACGAGTCACAATAGCAACAAGCTTCAAGATTCGGATTATGGCAGAAGAAGCGTTTCTTCTCACAGTACTTCTTCTCCGCCGGTACCGAGTTCGCCCTCGCCTTCCTTAAACTTAAGTTTAAATCCGAAAAATACCTTGAAGACACCACTAGGAACTTCTTGTAGCGCCTCGACAACGCCGATATTAAGTTCCCCATTGAAATTGGCTTGTATGTATTGCACAAGAGATTCCTTTAGTTGTATGCAACAATTACAAATGCATGTTCACACGATGCACCAAGCGATTCTGAGCGGAGAAAATCTTGTGGTAGCACCGTCCCCAAATAGGACGACTGATTCGGCTGTCGATTGTTCCCGTGATAAAACATTGGATCGAACCGATAATAATTCCAAGGATCAAGAGAAAAAGTATGACGAAAGATCGTTGGAAAaggattataaaaatacttttacttGTTGCCAATGTACCATGAAATTTTCGAGTTTAGCTACGTTAAGAGATCATTTGATTTCTATACATAGAACCGATGCTTTTGGTACGTCATTGATAATGTGTCCTCTTTGTGGTATACCATGTAGCTCTGCAGCAGCTTATGCTGAACATTACGTTCTTCAACATTGTGAGAATCGTCGAATAGCTCCACAAAATCCTCAAGAATATATGGATCCAAAATTGAATGGAGTTTACGATACGAAAAGTATGATATTACAAAAGAATAGAGAACAACCTTCGATAGAACCAGCAGATCTTACTAGCAAACACCTTAAATCCTCTGAGAGCAATTACACTTCTAGTACACTTCTTTGTGGTCAATGTGGTGCAGCTTTGAAGGATTTTGAATCTTTCCGAGAACACGTTGCTAGACACTTGCAAGCTGATCAACGAAACGAAATAGCGAGATACCTCTGTCCAAAATGTGATACGAGTTTTCAAGATAGAGAAGATATGTTAGCACATTTAACGAAGCATTATTTGGGCCAAATTAGTAAGGAATACGCTTGCTCTGCTTGCAAGAAGCTCTATCCGCATCCAGATTTACTTCAAAGGCATCTTTTAGATAGTCATGCTAATCATCTTTACAGGTGTGCACTTTGCAGAGATACCTTTGATTCTAGGGTAGCGATTCAAGTACATTTTGCTGTTAAGCATAGTCAAGAATGTAGAATATACAGATGTAATGCTTGTACAATAccaaataatgaaaattcacCTGGAAGTGTACCCGCTGAAGGTCGAAGTTTCTTCAGAAGCGAAAGCGAGATGGCTAATCATGTTAGAAACGTTCATGCGCCACCAGCCGTGATGAACAATAGTCCAGTTGTCACAAGTCCAGCTTCTACGCCAGGAATGACAGTCAATTCTGGACCGAGATGTGTCTTTTGCGGAATCTACTGTAGCTCCGAACTCGAATTACAGCTTCATTTGGCAAGCCATTCGACTAGTCTTTATAGATGTCCTATTTGCAGAGAAGGCTTTGCTGTTGAATTCTTATTGGATAGACATATTACTCAAGTACATCATACTGGCGAACATCAATTAAATGTTCGAAATAATTCACGAGAAAATGGACGGCTTCATCGTCAGGCTAGATCTCAAGAAGAAGTCAAATCGCAGAAGAGAGGACGTTCGCCAGCGTCGAGTAACAACAACTCTTTGAATCAACGtgacaataacaacaaaaggCCAAACTTCGGTGCATCGGGAGGACAACAATGTGAGCTATGCGAGCGTGGTGAATTCGCAAACGAAGCTGAACTGCAAGCTCACAAAAAGTTAGCTCACGCATCTTCAAAAGTTCCAAGCAAAAGTTCTTTATCAAGTCTGAGCATGACTTGTGCTTATTGCGGGGAAGTCTGTCGATCAAGAAACGAGCTGGAATCTCATATGAGAATGCAACATACTTCGACCGAGCCTGGTGGTCGACACAAGTGTAATATATGTGACGAAGTCTGTCCCTCGGGCGCTATTTTAGCTGAGCACAAGCTTCAGAAACATTGTAAGATTCAATTAAGCGATACTTGTGTCGTTTGTCGTGGAAATTTATCAAACGAAGCATTATTCCTTGAACATGTACAAAGACACAGCTTAGAAAATGTAGATCCTCAACAAAGGCTGGACAATTCTTTGCCTCATCTTCCAGCACCATGCGTTGTTTGTAGACAAACTCTTATCAGCGATTTGGAATGTCGTCTTCATGCTCGTCATCATCTTAGAACATTCACTAGTTCGCCAAATACGAGTTCCAGTCCAAGTCCTAAACAAAAACTACTCAATCCAAGTTGTTGCCTTTGCCTACGAGAATTCTCTACCGAAGATTTTGTCACCCTTCCTCCCAATCACATCAGTGGAGGACAATCTCTTAAAGTCTGTAAATCTTGCTATGTGAGGTATTCCCAAGGTCTACCAATTCTGAGTTCACCTTATGAACATGTTCGTAATGCTAAGTGCGAACGTTCTTGGATCCCTAATAAAGATCTACAATGGAATGGTTCCAAAGATAGATGGGATTCTGATCGTAGTTTTAAAACTGAAAATCGTTCGATTAATGATCCGAATGGCGATACTAAAAGGTGTGAAGAGTGCGGGGTGAAATTTGAAAATCCTGAAGAAGCAAAAAAGCACAAAATTACTTTACATAATAAAACATACGATAATGAATCCAATACGTACACGTGCATACAATGCCAGatgTCATTTCCAAGTGAAACTATGATACAGCAACACGTAACTAAAGAACATTTAGAAGTATCAGGAAAAGGAACTGTTGATACTTTGAGATGTCATTTATGTCTGTTCGAAGCAAATAGTCCTCTCCAATTGCAGAGCCATTTGATAGAGCATACGTTTGCTGGATGTGCTGCTCTCAATTGTTATATCTGCCAAGCTCTTTTCACCGTGCCTATTGCTCTGCAGaaTCATATGTTGCAAGAACATGGTTTGAATGCACGGCCTTACGATTGTTCTAAATGTACCTCAAAGTTCTTTTTCAAAGCTGAATTAGATCATCACATAATAACGTTCCATCGTATCGAAGAAAATTCTACAATATCTGAAACAGTGAAAGAGATGATAGGAGAAACGAAAAATCCAATTAATAATGAGGATCGtaaattcgatgaaaatattacgataaaagaagaattattacAAGAAActgaggaagaggaggaagaagaagcagcggaagaagaagaagaaggagatgaagaagaagaagaagaagaagacgacgacgaagaagttAACGTGGATGGACAATTTGAACAAGACAAGATGGCTAAAGAAGAATCAgcgcaaaaaaaaacagttttGAAAACGGAAGTCAATAAACAGATAGAATCTGAAAAAGTAGAAACGTGA
Protein Sequence: MSRRKQAKPRSLKRDEEWDDANEQNVLEASEQDNETAPIKPEDEDEEEEEELQRAFSRHSEDYLQDGRPSSVQGPDLENQNSLDSEALGTGSSSWHSEDGGPSSRRGRETPSSCATPTSASFPSEPEIDGEVGIGTDGNNPTAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCERLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKHHQGTSHNSNKLQDSDYGRRSVSSHSTSSPPVPSSPSPSLNLSLNPKNTLKTPLGTSCSASTTPILSSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGENLVVAPSPNRTTDSAVDCSRDKTLDRTDNNSKDQEKKYDERSLEKDYKNTFTCCQCTMKFSSLATLRDHLISIHRTDAFGTSLIMCPLCGIPCSSAAAYAEHYVLQHCENRRIAPQNPQEYMDPKLNGVYDTKSMILQKNREQPSIEPADLTSKHLKSSESNYTSSTLLCGQCGAALKDFESFREHVARHLQADQRNEIARYLCPKCDTSFQDREDMLAHLTKHYLGQISKEYACSACKKLYPHPDLLQRHLLDSHANHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTIPNNENSPGSVPAEGRSFFRSESEMANHVRNVHAPPAVMNNSPVVTSPASTPGMTVNSGPRCVFCGIYCSSELELQLHLASHSTSLYRCPICREGFAVEFLLDRHITQVHHTGEHQLNVRNNSRENGRLHRQARSQEEVKSQKRGRSPASSNNNSLNQRDNNNKRPNFGASGGQQCELCERGEFANEAELQAHKKLAHASSKVPSKSSLSSLSMTCAYCGEVCRSRNELESHMRMQHTSTEPGGRHKCNICDEVCPSGAILAEHKLQKHCKIQLSDTCVVCRGNLSNEALFLEHVQRHSLENVDPQQRLDNSLPHLPAPCVVCRQTLISDLECRLHARHHLRTFTSSPNTSSSPSPKQKLLNPSCCLCLREFSTEDFVTLPPNHISGGQSLKVCKSCYVRYSQGLPILSSPYEHVRNAKCERSWIPNKDLQWNGSKDRWDSDRSFKTENRSINDPNGDTKRCEECGVKFENPEEAKKHKITLHNKTYDNESNTYTCIQCQMSFPSETMIQQHVTKEHLEVSGKGTVDTLRCHLCLFEANSPLQLQSHLIEHTFAGCAALNCYICQALFTVPIALQNHMLQEHGLNARPYDCSKCTSKFFFKAELDHHIITFHRIEENSTISETVKEMIGETKNPINNEDRKFDENITIKEELLQETEEEEEEEAAEEEEEGDEEEEEEEDDDEEVNVDGQFEQDKMAKEESAQKKTVLKTEVNKQIESEKVET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01233858; iTF_01233187; iTF_01234544; iTF_01235218; iTF_01090182; iTF_01513686; iTF_01515022; iTF_01514362; iTF_01512380; iTF_01513016;
90% Identity: iTF_01233858; iTF_01233187; iTF_01234544; iTF_01235218;
80% Identity: -