Pcan006063.1
Basic Information
- Insect
- Polistes canadensis
- Gene Symbol
- dsx
- Assembly
- GCA_001313835.1
- Location
- NW:91597-150694[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-15 3.8e-12 45.0 11.9 3 44 28 69 27 72 0.93 2 2 1.7e-16 4e-13 48.1 12.4 3 47 185 229 183 229 0.97
Sequence Information
- Coding Sequence
- ATGGATCACGCGAATCAAGCTGAAACTGACCTTATGAAAAATAACGCGTTTTCGAACAAGTCTACAGGCTCGCGCATAACGAGAAATTGTTCGCGATGTCGAAATCATGGATTAAAAGTTTCCCAGAAGGGCCACAAGAAGGATTGTATGTACCGAAATTGTGTTTGCGTATTTTGTAAACTTTTTTCGCCTCGACGGAGCACGAAGTCAAGACGTATTCGACTAAAAACTCCCACTTTAGACAAGGATTCAACATCACTCTCAATAGACTGGTGGTCCTTTGTCGGCTCGTGGCCACAATCCGCGAAGAATCTCAAGGGAAGTTAtgacagcagcagcagcgacTTGTCGGTCAGCAATCACGAAAGCAACGAAACTCAAGACGGGAACAACGATGTTACCAGAATTACTTCCTCAACGAAACCAGTATCTTCTAAAAAGTTGCCTTCAGCAACAAAGTCCTTGCCGCAATGGCAGAACGGGACGGATTCTAATGTATCTTCGGATGCATCTTCTTCGACTTCGAACAACGGCAACATCTTGCGTACAGCAAAGACGTGCTCACTCTGCCGCAATCACAATATTGTCAATATTTATAAGGGTCACAAGAGGTATTGCCAGTATCTATATTGTTTTTGTCCACCTTGTTGTAAAACCCGTAAGAACCGGAAAATAATGGCGGCACAAACTGCAGTTAACAGGGCACGTATCCAAGACGAGGCACAAATAGAAAAGTTATATAAGCTGATGAAGCCGAAAATACCTCCGCAACAAGTAAATCATGTACCAACTATTTCACAACCAGCGTGGAGCGTCGAAGGCAATTATGGTGGCGATGGCATTAACAATTTAGTTAATACTCCGACTCTGAGAAAAGTGCCAATTGATCCAATGAATCCTTTTTTGATCGATTCGATTCAATCAGAACCTGgcGTCGACGTCGAAATTATATTAGCACGCAGCATGACTCTTCTGCAACAATTCCAAAATCCTTGGGATATTCTGACACTCTTGTATGTTACTGTGAAGTATGCCGGTGCAAATCTCTACGAGGCTATCAGACGTATTCATGAAGCAAACAACGATATACAAAGCTTGGAACTTAACACGGTGAAAAACTTGTGGAGCGACAATAGGTTATACTATCCTGAATTCATACCGAAGACAGATATCACAGATGCGCCAACTTACGAAGGTGAAGCACCGTTCATTGGAGATCCGACCTCTCAAGTTTCTGAACACTTCACATCACAACCGCACCTCAAAAACACCCACATACCGACAAACAACAGCTCTTCGGAACATTATACCAAGTAG
- Protein Sequence
- MDHANQAETDLMKNNAFSNKSTGSRITRNCSRCRNHGLKVSQKGHKKDCMYRNCVCVFCKLFSPRRSTKSRRIRLKTPTLDKDSTSLSIDWWSFVGSWPQSAKNLKGSYDSSSSDLSVSNHESNETQDGNNDVTRITSSTKPVSSKKLPSATKSLPQWQNGTDSNVSSDASSSTSNNGNILRTAKTCSLCRNHNIVNIYKGHKRYCQYLYCFCPPCCKTRKNRKIMAAQTAVNRARIQDEAQIEKLYKLMKPKIPPQQVNHVPTISQPAWSVEGNYGGDGINNLVNTPTLRKVPIDPMNPFLIDSIQSEPGVDVEIILARSMTLLQQFQNPWDILTLLYVTVKYAGANLYEAIRRIHEANNDIQSLELNTVKNLWSDNRLYYPEFIPKTDITDAPTYEGEAPFIGDPTSQVSEHFTSQPHLKNTHIPTNNSSSEHYTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01234365;
- 90% Identity
- -
- 80% Identity
- -