Basic Information

Insect: Polistes canadensis
Gene Symbol: bab2
Assembly: GCA_001313835.1
Location: NW:275441-328586[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.5e-13 3.2e-10 38.6 0.0 1 39 382 421 382 425 0.90

2 4 1.5e-12 2e-09 36.1 0.1 2 39 437 474 436 477 0.94

3 4 3.5e-19 4.6e-16 57.3 0.0 1 45 491 536 491 536 0.97

4 4 6.4e-19 8.4e-16 56.5 0.1 1 42 543 585 543 586 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.5e-13	3.2e-10	38.6	0.0	1	39	382	421	382	425	0.90
2	4	1.5e-12	2e-09	36.1	0.1	2	39	437	474	436	477	0.94
3	4	3.5e-19	4.6e-16	57.3	0.0	1	45	491	536	491	536	0.97
4	4	6.4e-19	8.4e-16	56.5	0.1	1	42	543	585	543	586	0.97

Sequence Information

Coding Sequence: ATGGTAAGCGGCGGAATGGCTGGGCAGCACTACTGCCTACGTTGGAACAACTACCAATCCAACATGACATCCGTTTTCCATCAACTCCTGCAAAACGAGGCCTTCGTAGACGTCACCCTGGCATGTAACGAAGCTTCGTTGAAGGCACACAAGGTAGTCCTATCGGCCTGCAGTTCCTACTTTCAGAAACTCTTACTCTCAAATCCATGTAAACATCCAACTATCATCATGCCACAGGACGTATGCTTCAGCGATCTCAAATTCATCATAGAATTTGTCTACAGAGGAGAGATCGATGTATCTCAAGCAGAACTACAGTCGCTTTTGAAAACGGCCGACCAATTGAAAATCAAGGGCCTCTGTGAAGTACCTGAAAGTAAGGACGGGCCACCATCAGTGAGTTTAAGCTCACCACCGAGAGAACCTGGTTCACAAAGATTCAACTTTACCAGGTTGAAGAGACCTTATCCAAGGTATAAGAGAACGAGGACATCATTTGAGCCTCGTGCCACTGATTCTAGGCATTACGATAGAtataaagaggaagaggacaGTGATAGTTACCATCGCAAAAATAAAGAGAATCGCAGGGACTGGCAGGTAGAAGATGAAGAGTGCACGGAGGTGGCAGCGGCAGCAGCAGTAGTTCTGGAAAGCTGCCAACGTAACAGTAACAATAGCACCAACAACGCTAACGgtacaaacaacaacaacaataacgGTGACATGTTCTGTCACACAGGGCTAGGTCATTACGGTCATCACCCAGATCCTGAGGTAGATCTGCCTCCAGAAACACAGCCCACACCACCTAGCGCTACTTTGGTCGGTACCACCATCACTCATTTGCGAGACTCTGATCATCATTCGACTGAGATACAAAATTGCGATACAGTGAAGATCAAGTTCGAAACCCTGCACACGATGGATTCTTCGGACACGATCGATATCGACAGTCATATGTCGGACAGAGCTAGTGTAAGCTCAAAAAATGCTGCGGACAGCGATAatatgatgatgataacgCCTGAACTTCTCGGACTCATGCCCTCTGGCAGTTCGATTCATTCGGACTCGGGTGAAAATAATTCGAGAGGTCATTCTGGACAGTCGAGTTCACATCATCATGGTAATAAATCATGGACACAGGAGGACATGGATGCTGCGTTGGAAGCATTAAGAAATCACGATATGAGTCTTACGAAAGCATCTgCTGCATTTGGAATCCCATCAACGACGCTCTGGCAAAGAGCTCATCGTTTAGGAATCGACACGCCAAAAAAGGACGGACCTACGAAATCCTGGAGCGACGAGAGTTTGAATAATGCATTGGAAGCACTAAGAACAGGAACGATCTCAGCTAACAAGGCATCGAAAGCTTTTGGTATACCTTCCAGTACACTTTACAAAATAGCAAGAAGAGAGGGTATTAGATTAGCTGCACCCTTTAACGCGAGCCCAACTACCTGGACACCTGCCGATTTGGATCGTGCATTAGAAGCAATAAGATCTGGTCAGACCTCTGTTCAGAGAGCTTCCACGGAATTTGGTATTCCTACGGGAACTCTCTATGGTAGGTGTAAGAGAGAAGGGATTGAACTCAGCAGAAGTAATCCCACACCTTGGAGCGAGGATGCTATGACCGAAGCTCTAGAAGCTGTCAGGCTAGGTCACATGAGCATCAATCAAGCAGCTATTCATTACAATTTACCATATTCCTCCTTGTACGGACGTTTTAAAAGAGGCAAATACGAGGAACCGGTAGTCGGTGATTTGTCACAGGACGGCACCAACTCACACTTTCATCAAAGTCCTACGCAGAATCACTCATCTACGATTCCCGATCAAATGTCTTATCAGGGTAGCTGA
Protein Sequence: MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESKDGPPSVSLSSPPREPGSQRFNFTRLKRPYPRYKRTRTSFEPRATDSRHYDRYKEEEDSDSYHRKNKENRRDWQVEDEECTEVAAAAAVVLESCQRNSNNSTNNANGTNNNNNNGDMFCHTGLGHYGHHPDPEVDLPPETQPTPPSATLVGTTITHLRDSDHHSTEIQNCDTVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSIHSDSGENNSRGHSGQSSSHHHGNKSWTQEDMDAALEALRNHDMSLTKASAAFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWTPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDLSQDGTNSHFHQSPTQNHSSTIPDQMSYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_00391429;
80% Identity: iTF_01232478;