Pcan004386.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polistes canadensis
Gene Symbol
dl
Assembly
GCA_001313835.1
Location
NW:288339-295864[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-75 4e-72 240.7 0.1 1 169 18 188 18 188 0.99
2 2 1.8 5.6e+03 -3.8 0.0 38 68 259 291 258 294 0.74

Sequence Information

Coding Sequence
ATGGATCAAGAAAAAATGGAAGTTGATAGAAAGCACATGGCGCAACCTTATGTGGAGATAGTAGAACAACCTGCAAGCAAAAGCTTGCGCTTTCGTTATGAATGTGAAGGTAGATCTGCGGGTAGTATACCTGGAATTAACAGTACACCAGAAAACAAAACTTTTCCTACTATAAGAATAGTAGGCTATAAAGGTCGAGCTGTGGTAGTTGTATCTTGTGTAACAAAAGATTTACCATACAGACCTCATCCCCACAATCTTGTTGGCAAAGAAGCATGTAAACAAGGCATCTGTACGCTTGAAATTACATCTGATAACATGACTGTAACTTTTGCTAATTTGGGTATCCAATGtgtcaagaaaaaagacaTAGAGGAAGCACTCAAAATCAGAGAAGAAATTCGTGTCGATCCTTTTCGAACTGGTTTTGAACATAGAAAACAACCTACTAGCATCGATCTTAATGCAGTGCGACTATGTTTCCAAGTATTTTTGGAAGGAAcacgaaaaggaaaatttacTCATCCATTACAACCCGTAGTATCAGATCctatttttgataaaaAGGCAATGTCCGACCTTTCGATCAACCATTTAAGTCATAATAGAGCTCCTTCTTGCGGAGGTATGAAAATGATACTTTTATGCGAGAAAGTAGCTAAAGAAGACATACAAGTTAgattttttgaagaaaaaaatggacatGTTTTTTGGGAAGGATATGGAGATTTCGCACCCACGGATGTCCACAAGCAGacGGCGATCGTGTTTAAAACACCTAGTTACCGTATTCTACAAATAGAAGAACCAGTACAAATTTACATCCAATTGAAGAGGCCATCAGATGGTGTAATAAGTGAACCACATCCATTTGAAATGTCACCATTGGATACAGGTATGCCTGCTTTCTGGTCTTTGCGAAAAGCATTTGCTCGAAAAAAAGTAGATTACAGTACATTTGGTAAAATTTTAACGACCGAGGCTACATTGTTTCCCAATGTAATACCAAAAGTGCCTTGTAATAttgatgaatataataataatagtttagacacaaaaaaatcaaataataaaatttcagtaCTACGTGCTTTGAAtgacttatataatattagaaatactACAAATTCTTACAATGGAAGTACTGACATTGATcaaaacaatgtaaaaaatgttgaatgttttatgaaaaattctattgattatgataataatgaaatgcCAATTGACTCTAATAGCACGATTAAAGGAAATGTACAAGTCAATAAGTATATTACTGGTAATGATATTAGTATAgagaataatacattttcaaacGATTATAGAGATACGACGCTTGATAACCAATCagaaattatttctcaaacaaaattagatttaaCAAACGatacaaaatgtttaaataaaaacattgccaactcaaaaaataaatctgatTGGTTTGATTATTCGGAAGTAGGAAAGTGGGTACAAAAAAATCAAGcttctttcaaagaaaaagaaaatacagcTGAGATTAAAAACGAAATGGAAGATGGTAATAAATCGTTGAACGATTTGATATCTCAAGTAGATGAGTTAGATCAAATTTACGCTGATACGCATACGAAATTGTTACAAGCTACTCTTGATCAAAACGTGATTGAAAGATCTATGGATGTCGATGTTTGTGATAATCAAACTTATACTAGTCTTCAAATGGCTATGAAAAATCCaatagaattatttgatatacctgatgaaagaaaatatgaggATGTATCGACTCCAAAACAAGACGTATGTGTATCATTGTCTTCTTCGCCAATAGCAACGAAAAGAGATGTAACacaaaaatttgaagaaaaattaccTCCCCTACCACCAAAACGTATACGTAAAATGTCTTCTATGCCTGTTTTACCACGGCCTACGTCCTCTCAACCAATAATCGAATCTTCCTCTGAAGCTCCAAACAAGAATTTACCTTCTCTTCCTGGTACCTTACCCAAACAATCTAAACAAAGTCTCTTTTCTAAACTATTtgcaaagaaaatgaaaaaagacaaagatatAACTTCCAATGTATCCACGgacaataataatcgtttatttaatgCAGGAGAGAGTGCTTcgtttttgttaaaaagtattCAAGATAATTCTGCAACGCAAATGTCTAGACATAGTATTGCAAGTATTACTAGTAAATCTCTTACGTTAGAAGGTGATGAAACACCACCTTATGGGGTTGACTTAACAGAAGCTGAACATTATGCTCTTTATACTACTATGGCGCCCCATGCAACAGCATCTGAATTCGATGAAAtgtctttttattatagtcCTGTAGAGggaggaaaaatattaacggaaagaaaagaatcttaa
Protein Sequence
MDQEKMEVDRKHMAQPYVEIVEQPASKSLRFRYECEGRSAGSIPGINSTPENKTFPTIRIVGYKGRAVVVVSCVTKDLPYRPHPHNLVGKEACKQGICTLEITSDNMTVTFANLGIQCVKKKDIEEALKIREEIRVDPFRTGFEHRKQPTSIDLNAVRLCFQVFLEGTRKGKFTHPLQPVVSDPIFDKKAMSDLSINHLSHNRAPSCGGMKMILLCEKVAKEDIQVRFFEEKNGHVFWEGYGDFAPTDVHKQTAIVFKTPSYRILQIEEPVQIYIQLKRPSDGVISEPHPFEMSPLDTGMPAFWSLRKAFARKKVDYSTFGKILTTEATLFPNVIPKVPCNIDEYNNNSLDTKKSNNKISVLRALNDLYNIRNTTNSYNGSTDIDQNNVKNVECFMKNSIDYDNNEMPIDSNSTIKGNVQVNKYITGNDISIENNTFSNDYRDTTLDNQSEIISQTKLDLTNDTKCLNKNIANSKNKSDWFDYSEVGKWVQKNQASFKEKENTAEIKNEMEDGNKSLNDLISQVDELDQIYADTHTKLLQATLDQNVIERSMDVDVCDNQTYTSLQMAMKNPIELFDIPDERKYEDVSTPKQDVCVSLSSSPIATKRDVTQKFEEKLPPLPPKRIRKMSSMPVLPRPTSSQPIIESSSEAPNKNLPSLPGTLPKQSKQSLFSKLFAKKMKKDKDITSNVSTDNNNRLFNAGESASFLLKSIQDNSATQMSRHSIASITSKSLTLEGDETPPYGVDLTEAEHYALYTTMAPHATASEFDEMSFYYSPVEGGKILTERKES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01089769;
90% Identity
iTF_01233417; iTF_01234125; iTF_01234797;
80% Identity
-