Pcan008912.1
Basic Information
- Insect
- Polistes canadensis
- Gene Symbol
- usf1
- Assembly
- GCA_001313835.1
- Location
- NW:433332-436335[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.031 1.4e+02 1.8 0.0 11 38 93 121 92 127 0.83 2 2 6.7e-08 0.00031 19.9 0.6 17 46 173 202 170 207 0.94
Sequence Information
- Coding Sequence
- ATGCGATATCAAGAAGCGCTAGCATATAGAGTGGTTCAAGTCAATGGTAATTCAAGCAATAATGAAATAGAACTGCCTGTAGGACAAGCAGGAAACAATACCGTACAAGTTTTAACATCTCCTTTAAATGGACAGTTTTATGTCATTGGCAATGCTAATGATGTTTTCACTACGGCTCAAACATCTAGGTCTTTAGTTCCTAGGACTACTACTCTTCAAATAGAAACACCACGAAATTGTACTACCGGCTTAAAAAAGAGAGATGATAGAAGAAGAGCAACACATAATGAAGTTGAACGTCGGCGTAgagataaaatcaataattggATAGCAAgattaggaaaaataataccCGAATGTAATGCGACCAGCAATACTACTGGAAGTGGTAATAGTGGAGAAGGAAAGGCAAACTATGAAACCCAGAGCAAAGGAGGGATTTTAGCAAAGGCTTGTGAGTATATAGGCGAATTACGTGCAGCTAATCAAGGATTGGGTCAATGTTTACGAGATAATGAGAAATTAAGACAAGAAATAACTGCTTTAAAGCAGCTTATTTCGCAACTGAAGCGTGAAAACCTACAACTTCGAACACAGTTGTCTTCATCGTCAGGGACAAGTGCTGATGTTCATTTAAGTTCGTAA
- Protein Sequence
- MRYQEALAYRVVQVNGNSSNNEIELPVGQAGNNTVQVLTSPLNGQFYVIGNANDVFTTAQTSRSLVPRTTTLQIETPRNCTTGLKKRDDRRRATHNEVERRRRDKINNWIARLGKIIPECNATSNTTGSGNSGEGKANYETQSKGGILAKACEYIGELRAANQGLGQCLRDNEKLRQEITALKQLISQLKRENLQLRTQLSSSSGTSADVHLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070773;
- 90% Identity
- iTF_01513187;
- 80% Identity
- iTF_01232138;