Basic Information

Insect: Polietes domitor
Gene Symbol: -
Assembly: GCA_947397865.1
Location: OX377621.1:172053215-172055631[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00052 1.7 10.4 1.2 6 44 245 277 244 277 0.92

2 11 0.035 1.2e+02 4.6 0.9 14 39 283 305 278 310 0.76

3 11 0.00033 1.1 11.1 0.1 17 43 321 344 317 345 0.92

4 11 0.0091 30 6.5 0.0 15 44 358 384 351 384 0.87

5 11 0.16 5.3e+02 2.5 2.1 18 44 400 423 397 423 0.94

6 11 0.003 9.8 8.0 1.1 14 44 434 461 428 461 0.89

7 11 0.0039 13 7.7 1.6 15 43 482 507 473 508 0.88

8 11 0.00021 0.68 11.7 0.6 17 44 525 549 518 549 0.85

9 11 1.7e-05 0.056 15.2 0.7 14 43 564 590 556 591 0.89

10 11 0.0031 10 8.0 1.9 6 43 601 633 600 634 0.82

11 11 9.1 3e+04 -3.1 2.9 15 34 638 657 631 663 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00052	1.7	10.4	1.2	6	44	245	277	244	277	0.92
2	11	0.035	1.2e+02	4.6	0.9	14	39	283	305	278	310	0.76
3	11	0.00033	1.1	11.1	0.1	17	43	321	344	317	345	0.92
4	11	0.0091	30	6.5	0.0	15	44	358	384	351	384	0.87
5	11	0.16	5.3e+02	2.5	2.1	18	44	400	423	397	423	0.94
6	11	0.003	9.8	8.0	1.1	14	44	434	461	428	461	0.89
7	11	0.0039	13	7.7	1.6	15	43	482	507	473	508	0.88
8	11	0.00021	0.68	11.7	0.6	17	44	525	549	518	549	0.85
9	11	1.7e-05	0.056	15.2	0.7	14	43	564	590	556	591	0.89
10	11	0.0031	10	8.0	1.9	6	43	601	633	600	634	0.82
11	11	9.1	3e+04	-3.1	2.9	15	34	638	657	631	663	0.73

Sequence Information

Coding Sequence: ATGTCCTCGCCCACTCTTTGCCGTTTGTGCGTCAATGATTGCAGCGACTGTAAAAGCCTCTACCATGACAACGGTCATGGCAATGATTTGTATGCTCTGACACTGAAATATTTCCATCCCAAGATAGTGGACCTGGACAAGGCGAAACATCTCACTGGCATCTGTGCACAGTGTTGTCTGCACATTTATGACTTTCACACTTTCGAAAAGTCCGTTCTGCAGGCCCAACAGGAACTCGAGGAGGACTGCAAGAGTGTTGTGGTAAAATGGGAAGCTGTAGATAATACGGAGGAAATCCTAAGCGATCATACTCCGCCCAAGGTTAAAAGAGAGTTGATACATTTGTCAGAGGCGGAGGAGGAGGAAGAAGAAATAGAAGCTGGAGCGATAGATAGAAGTCAGTTCGGTGTGGAGGAGACCAAAACACAAGCGAACGCTTCTTCTGATCCCACTATATCGGCTGTAAATAGCCAGATTGTTTGCAAGCAGGGAATACAATTTGAATTGATTGATGTTTCGCAAGGCTCTTTACAAGGCCACTGTGGGAGCCGAACCACCGATGCTATACCCGAACAGTTGTCCGAAATATCTCTGCCAAAATTGGAACTTATCGATGTTCCACCAGATGGCGAATTTAATACGGATGATGAAATGCCACTGACGAATTATGTGGGGGATATTAAGAAGAAAGCTGCCAACTCCCAATGCCACCTTTCACACGCAGCTGACTTTTATTTTGACAAATCTACGAAAATGTTCAAGTGTATGTTATGCCCGAACACGTATCCCTTTAAGAGTTCCATAAAACACCATGTCGTCAGCCAACATCAGCAACCTGCCACATCCAGGCTCAAATTCAAGTGCGACCTTTGCGAAAACTCCTTTTCACATAAAAATCAATTGACGAAGCACATGGGCCTGCACCATACTCCCGCGCGAGGAGGTAGCAAGCCCCCGTCGTTCAAGTGTAGTTTTTGTGAGAAGATCTATGCCTTTCAAAATAGCCTGCAGCGGCATATGAAGAAGCAACACGCTGCACAGTACATGGTGACTGATTACGATGCCGCAACGAACAGCTTCAAATGTCGATTTTGCGGCGACTCTTTTCTGCAAAAGACCGAGTTAACGGCACACACTGAACGGCAGCATCCCGAACAAGTAGTGAATTTCCAAGCTGAGGGCAATCCTTCGCCCTTCAAATGTGATCTGTGTGGTTGCTGTTTCAACGTAAAGAATGGCCTGAAAATGCACCAGACGAGGAAACATCCCGAAGTGTTCCGGTCAGAGAGGCCCGAACCGAACGAAATGTTCCAGTGCCACTTATGTGATTGCACTTACAAACTCAAGCGCAGCTTAAAGCTGCACATGGAGAGTAAACATCCGGAAAGTCTCTCGTATGAAATCACCTCCTACGATCTGGACTCTGCCTACGATGAAACCACAAAGCTCTACAAATGTCACTTGTGCGGCAATTCTTTTCGCCACAAAAATACCCTTTCCTTCCACCTGCGCTCCAAACATGCCCAACAAACGGATGAGACTGTGTCCTCCCAAGATGCCTCAAGGCCAAGGCTGAAGTGCAACTGGTGCAACATCTCGTATTTATCCAAACGTGGCTTGAGGCGGCACATGAAGTCGCAACATCCCGACAAGATTAGGAAGAAACTGCAATTTGAATACGACGACACCACGCAGAGATTCAAGTGTACGCTGTGCGAACACTCCTACAAGGACAAGAGTAACTTGAGAGCCCACATCAGGACGCGACACACAGACGACCAGGATGTACAAAATCCCGACTACGCTTACGACGAGTCCAGGAAAATGTTCAACTGTAAACTGTGTGGCAACTCTTATATGTACAAGAACAAAGTGCTATTACATTTGATACGGCAGCATAACAAGTCTGGCACGATTTTTGGTTGCACTCAATGCAGCAAGGAGTTTGTTACCAAGTTGGGCCTGAAGTGCCACAACAAAATCCATCATGCCCCGTCGGGTGTGTATTCTTGCCAGGAATGCGGCAAGAATTTCAAGAAATTATTCCCTCTGCGACGCCACATGTACTACCATAAGGTTCAGCCCAAGCACAAGTGCTCGGTTTGCGGCAAAGCCTTTAAGAGTCCCTATCAATTGCGTATACATATGAAGAGGAGTGCTCATCATCATGAGAAGAAAGTTATACAAGGAATGCCCAAAAATGAATGTGTGGGCGAGCCACAGACCACAAAAATTAAGCTTGAACCCAAGGATCCACTGGGAGCTGGAGTTTGCCTTGAACAAGAGAGTATTCCAGGCATTTCTAATGAGCTGGAGACCGCAATAGTTAAAGTAGAACCTATAGAAGCACTGGGAGTTTGA
Protein Sequence: MSSPTLCRLCVNDCSDCKSLYHDNGHGNDLYALTLKYFHPKIVDLDKAKHLTGICAQCCLHIYDFHTFEKSVLQAQQELEEDCKSVVVKWEAVDNTEEILSDHTPPKVKRELIHLSEAEEEEEEIEAGAIDRSQFGVEETKTQANASSDPTISAVNSQIVCKQGIQFELIDVSQGSLQGHCGSRTTDAIPEQLSEISLPKLELIDVPPDGEFNTDDEMPLTNYVGDIKKKAANSQCHLSHAADFYFDKSTKMFKCMLCPNTYPFKSSIKHHVVSQHQQPATSRLKFKCDLCENSFSHKNQLTKHMGLHHTPARGGSKPPSFKCSFCEKIYAFQNSLQRHMKKQHAAQYMVTDYDAATNSFKCRFCGDSFLQKTELTAHTERQHPEQVVNFQAEGNPSPFKCDLCGCCFNVKNGLKMHQTRKHPEVFRSERPEPNEMFQCHLCDCTYKLKRSLKLHMESKHPESLSYEITSYDLDSAYDETTKLYKCHLCGNSFRHKNTLSFHLRSKHAQQTDETVSSQDASRPRLKCNWCNISYLSKRGLRRHMKSQHPDKIRKKLQFEYDDTTQRFKCTLCEHSYKDKSNLRAHIRTRHTDDQDVQNPDYAYDESRKMFNCKLCGNSYMYKNKVLLHLIRQHNKSGTIFGCTQCSKEFVTKLGLKCHNKIHHAPSGVYSCQECGKNFKKLFPLRRHMYYHKVQPKHKCSVCGKAFKSPYQLRIHMKRSAHHHEKKVIQGMPKNECVGEPQTTKIKLEPKDPLGAGVCLEQESIPGISNELETAIVKVEPIEALGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231849;
90% Identity: iTF_01231849;
80% Identity: iTF_01231849;