Pdom045147.2
Basic Information
- Insect
- Polietes domitor
- Gene Symbol
- bab1
- Assembly
- GCA_947397865.1
- Location
- OX377621.1:21115102-21116952[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-17 7.6e-14 52.9 0.0 1 43 58 101 58 103 0.95 2 2 4.6 1.8e+04 -2.7 0.5 3 13 197 207 195 211 0.79
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCTCACGCGTGGATGGGTGGCGGTGGTAGCTCAGGTTCATCGATAGCAGCAGACAGCTATCAATACCAGTTGCAGTCGATGTGGCAGAAATGCTGGAATACCAATCAAAATCTTATGCATCATTTGCGCTTTAGAGAACGCGGTCCCCTAAAATCATGGCGGCCCGAAACAATGGCCGAGGCCATATTCAGCGTTCTCAAGGAGGGTTTGTCGCTATCACAGGCCGCCCGTAAATACGACATTCCCTATCCCACGTTCGTTTTGTACGCCAATCGCGTGCACAATATGCTCGGCCCGTCCATAGATGGTGGGCCCGATCTTAGACCCAAGGGACGAGGACGTCCGCAGCGTATACTGTTGGGCATCTGGCCGGATGAACATATCAAGGGAGTCATTAAGGCCGTGGTCTTTCGCGAAGGCAAAGATATGAAAGACGAGGGCATAGCGCACATGCCGTACGGGCGTCATTCGCCTATTTTTCCATTTCAGGAAGCCAATCTCAGTTATCCGGGCGTAAGTGCACAATGCCCGAACGGCATGCCCACACCCACGCCGACGGGAGACCAGATGTCGCAGGAAGCGACGGCAGCTGCCGTGGCGGCGGTGGCCCATAATATACGGCAGCAAATGCAAATGGCGGCCGTGCAACAGCAACAGCAGCAGCAACAACAACAGCAGCAACATGTTGAAGGTCCCACGGGCCCCAGTCTTTTCAATCTCCCGCCGCATTTGGCCAGCAGTGGAGCACTGCCGGTGCCCTCCGGACCCGGGGGCATGATTCTGCCCAAGGCTAGCATTTCACCAGCACTGAGTGCGTCCTCCGGCACGGGGGCGATGTTGGGCCCCCGACATGCTCCCTCTCCCTGCGGCCCAGCATTGCCGGTTATAACACAGCTGCCACCGGGCATGGCGGCCGCTTTACATATGGCTGGCTCTCCTGCATCACGATGTGATCCCAATACACTTCTAAGTCAACAGCAGCAGCATCAGCTGCAACAACTGCATCTGCAGCAACAGCACGCCATGCACCAGCAACAGCAGCAGCAACAACACAAACATCATCAGCATCCGCACCAGCACCAACATCAACAACATCAACAACAACATCAACAACAACATCAGCATCAATTATCTTATGGTTCGCACCATCTATCCTTAAGTCATCCTTCCAATCCGACGCCGGTGGGCAGCTCATCATCCATCCATTCGCATCTGCAGCATACCTCAACGGCCACAACGACGGCATCTTCCACCAAATCATCATCGTCCACAGTGTCGCCGCTGAGGCGGGCCAGCCCGCACAGTGTTTCTCCGCTCACGGAACTAGGTCTCGAAATGGCCTTTAAGCCCGCCCGGCCATTTTCACCGTCGCGTCTATTCGCCGATGATATAGCCGACATCGTTGGTGTACCACCGCCTGCTTCTTCGTCTTCTTCTTCCTGCACACCAGCATCAGCCACCGTGACTACGGCAACAATAACAGCGGCCAGCTCGTACAGCCTACCGACAGCGTCGTCATCGGCCATCGATTCGACGACATCGGCTTGCGTGTCATCGGCGCCATCGGGCACGGCAGCGACCGCTGCCACAACAGCAGCTACCGTCGTATCTTCCGCCAGCAGCAGCAACATAAGTTCCACGGGCATCAAACTCGAACCCATCACTACAAGTAGCGACTAA
- Protein Sequence
- MMENSHAWMGGGGSSGSSIAADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKAVVFREGKDMKDEGIAHMPYGRHSPIFPFQEANLSYPGVSAQCPNGMPTPTPTGDQMSQEATAAAVAAVAHNIRQQMQMAAVQQQQQQQQQQQQHVEGPTGPSLFNLPPHLASSGALPVPSGPGGMILPKASISPALSASSGTGAMLGPRHAPSPCGPALPVITQLPPGMAAALHMAGSPASRCDPNTLLSQQQQHQLQQLHLQQQHAMHQQQQQQQHKHHQHPHQHQHQQHQQQHQQQHQHQLSYGSHHLSLSHPSNPTPVGSSSSIHSHLQHTSTATTTASSTKSSSSTVSPLRRASPHSVSPLTELGLEMAFKPARPFSPSRLFADDIADIVGVPPPASSSSSSCTPASATVTTATITAASSYSLPTASSSAIDSTTSACVSSAPSGTAATAATTAATVVSSASSSNISSTGIKLEPITTSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00679402;
- 90% Identity
- -
- 80% Identity
- -