Ecya023169.2
Basic Information
- Insect
- Eudasyphora cyanicolor
- Gene Symbol
- bab1
- Assembly
- GCA_963930755.1
- Location
- OZ005735.1:273430752-273432615[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-17 7.1e-14 52.9 0.0 1 43 55 98 55 100 0.95 2 2 5.6 1.3e+04 -2.4 0.6 3 13 197 207 195 218 0.79
Sequence Information
- Coding Sequence
- ATGATGGAAAACTCTCATGCTTGGATGGGTGGTTCAGGCTCATCGATAGCAGCAGACAGTTATCAATATCAGTTGCAATCGATGTGGCAAAAATGTTGGAACACCAATCAAAATCTCATGCATCATTTGCGCTTTAGAGAGAGAGGCCCGCTGAAATCATGGCGTCCTGAAACTATGGCCGAAGCCATATTTAGTGTCCTTAAAGAGGGCCTGTCCTTGTCACAGGCGGCACGTAAATATGACATACCATATCCCACGTTTGTGTTGTATGCCAATCGGGTACACAATATGTTGGGACCATCTATTGATGGCGGCCCGGATCTACGTCCCAAGGGACGAGGACGTCCACAGCGTATACTGTTGGGTATTTGGCCAGATGAACATATCAAGGGTGTAATTAAAACGGTGGTCTTCCGCGAGGGTAAAGATTTGAAGGATGATGCTATAGCAGCGCACATACCATACGGCCGGCATTCGCCTATTTTTCCATTTCAGCAGCAAGAACCAAGTCTCAGTTATGCCGGGGTAAGTGCTCAATGTCCCAATGGCATACCCACGCCCACTCCGACAGGAGATCAGATGTCGCAGGAAGCTACTGCCGCCGCAGTGGCGGCTGTGGCCCACAATATACGTCAGCAGATGCAAATGGCTGCCgcccaacagcaacaacagcagcagcaacaacaacaacagcatcagcaaCATAGCGAAGGTCCAGCGGGTCCAGGCCTTTTCAATCTCCCTCCGCATTTGGCCAGCAGTGGACCACTTCCAGTACCCTCGGGACCCGGTGGCATGATTCTGCCCAAGGCTAGTATTTCACCGGCTCTAAGTTCGACCTCAGGTTCGGGAGCAGTGGGAGCGATGATGGGTCCACGACATGCCCCATCACCCTGCGGTCCGACACTGCCGGTCATGACACAGCTGCCACCGGGGGTGGCGGCAGCTTTACACATGGCTGGCTCTCCTGCATCACGATGTGATCCCAATACACTTCTaagtcaacaacaacagcatcagctACAACAATTGCATCTACAGCAACAACACGCCATGCATCAACAACACCAgcaccaacagcagcagcagcaacagcacaaACATCATCCGCACCAGCACCAACACCAGCTTCCACAACATTCACACCAGCATCAGCACCAATTGTCATATGGTCAACACCATTTATCCTTAAGTCATCCATCCAGCAGTGCGACAGTGATGGGAACGCCTACCTATTCGCATATGCAGCCATCGTCTACGGCAACAACGACGGCCTCTTCCACCAAATCATCATCGTCCACAGTGTCGCCTCTGAGGCGCATCAGCCCGCACAGTATCTCCCCTCTAACGGAACTGGGGCTCGAAATGGCCTTTAAACCCGCCCGAGCATTTTCGCCGTCACGTCTCTTTTCCGATGATATAGCCGACATTGTTGGTGCCGCATCGGCAGCAGCGGCGGCGGCGGCCTCCGCTTCAGCTTCCACCACCTGCACCACATCAGCCACCGTGACTACAGCCACAATACCAGCGTCTAGCGCCTACAGTTTACCCACGGCGTCTTCAGCGGGGGGCTCTGTCGATACGTCAGCATCCATGGCTATATCTTCGTCAGCTGCTTCGGCAGTTTCGACGATGTCCACAACAGCAACAACTGTTGTATCTTccgccagcagcagcaacataagTTCCACGGGCATTAAACTCGAACCCATCACTACAAGtagcgattaa
- Protein Sequence
- MMENSHAWMGGSGSSIAADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFREGKDLKDDAIAAHIPYGRHSPIFPFQQQEPSLSYAGVSAQCPNGIPTPTPTGDQMSQEATAAAVAAVAHNIRQQMQMAAAQQQQQQQQQQQQHQQHSEGPAGPGLFNLPPHLASSGPLPVPSGPGGMILPKASISPALSSTSGSGAVGAMMGPRHAPSPCGPTLPVMTQLPPGVAAALHMAGSPASRCDPNTLLSQQQQHQLQQLHLQQQHAMHQQHQHQQQQQQQHKHHPHQHQHQLPQHSHQHQHQLSYGQHHLSLSHPSSSATVMGTPTYSHMQPSSTATTTASSTKSSSSTVSPLRRISPHSISPLTELGLEMAFKPARAFSPSRLFSDDIADIVGAASAAAAAAASASASTTCTTSATVTTATIPASSAYSLPTASSAGGSVDTSASMAISSSAASAVSTMSTTATTVVSSASSSNISSTGIKLEPITTSSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01374883; iTF_01231506;
- 90% Identity
- -
- 80% Identity
- -