Pneb029754.2
Basic Information
- Insect
- Polia nebulosa
- Gene Symbol
- ZFHX3
- Assembly
- GCA_951329385.1
- Location
- OX589599.1:20030455-20039589[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.033 5.7 9.4 4.9 1 23 84 107 84 107 0.95 2 15 0.15 26 7.4 0.0 1 23 114 137 114 137 0.95 3 15 0.0032 0.54 12.6 2.5 2 22 192 212 192 215 0.91 4 15 0.27 47 6.5 0.6 1 23 227 252 227 252 0.94 5 15 0.013 2.2 10.7 1.3 1 23 270 292 270 292 0.97 6 15 0.0033 0.57 12.6 0.3 2 23 299 321 298 321 0.94 7 15 0.0007 0.12 14.7 3.9 1 23 427 451 427 451 0.92 8 15 0.011 2 10.9 0.7 1 22 471 492 471 495 0.89 9 15 0.0011 0.2 14.0 0.2 1 23 542 566 542 566 0.93 10 15 0.47 80 5.8 0.1 3 21 641 659 639 660 0.92 11 15 0.84 1.4e+02 5.0 3.5 2 19 750 767 749 772 0.91 12 15 3e-05 0.0051 19.0 2.9 1 23 1279 1301 1279 1301 0.99 13 15 0.00078 0.13 14.6 0.3 1 23 1386 1408 1386 1408 0.98 14 15 0.0073 1.3 11.5 0.4 2 23 1546 1568 1545 1568 0.97 15 15 0.33 56 6.3 1.6 2 22 1798 1818 1798 1821 0.88
Sequence Information
- Coding Sequence
- ATGTGGTGTTTCCTTAGAAAAGACCCTTTGTCCATTGACAAAAAGCGTCAGAGATCGCGTTTATGCAGACAAGacACTAAGGAGCCTATCGACCAGAAGCCTGAGCTAACTCAGGAGCAAAAGATGATGAGATTTTTGGAACAACATCAGCAGCAacagcagcaacaacaacaacaacaacaacacgtGCAACAACAATCACAGCAAGGTCCAAGTGAGAGGGAGGAGGAGCGCGAGACCCCGGGACCACACACGTGTCCTTATTGTAACTTTAGTTGCTCGAATGAGTCGCGCCTACACGCACATGTCTCCTCCGTACATGGCGATCCCTCGCGACATTTCATTTGTCCTCTGTGCCAAGATGGCTTCAAGGAACGACCAGCCCTCGAACGACACGTCATGCAAATCCATTCCGTTAACTCTGAAGGACTACAGAGATTATTATTACTTGTTGACCAAAGCCATTGGCTGAACGGTGGAGCCCAATCTCAGAGAGACGAATCTCGGCAAGGTGATGATGAACGGGAGATTTCCTCGCCGCGATCAGAGGGCAGTGCTGATGGAGAAACAGAAAGATGCTCAACATGCAACCGCACTTTCAGAAACGTCGATGAGTTGTGTCAACATCAGAATGAGTCTGGCCATCTAGAACTGAAACAAACACCTCAAGGCCCAGGGTATGTCTGCTGGAAGAAAGGATGCAATCGATATTTTGATGCTGCTCATGCGCTACAAAATCATTTTAGAGAAGCGCACGCACGTAACTCCATTGCGAACATGTCAGTGTCTGAGAAACATGTCTACAAGTACCGGTGTAATCAATGTAGTCTAGCATTCAAGACGATTGAAAAACTACAGCTGCATTCACAATACCACGTTATCAGAGACGCCACTAAGTGTGTGCTGTGTGGAAGAAGCTTTAGATCAGTGTTGGCCCTTCAAAAGCACGTTGAGTCGTCCCATCCTGAATTATCTGAAGAAGAGCTAAGTGCATTCAAACGAAGCTTAGCATCGAACCCTTTACTACAAGCTGCCCAGGGCACAGCTCTAGATGCTGCAACTGCAGAGCTCCTACGCAAGGAAGCTCTAAGAACTCCTGACGATGACCTAGCAGATATGGAAGATAGAGATTCTAGCGCAACAGTCGCTGACGAGTCCGGTCATAATGACGCTGAAAACTCAGATGACTCAATTATTTACAAAGATCAACAATTCTTGGAAGATTACTTAAATTCACAAACAATGGCAGAAGACTCATATAATGACCCCAATAGAAAGTACAAATGTCATCGATGCAAGGTAGCATTTACACGCCAATCGTACTTGACATCACATAACAAAACACTTCTCCACAGAAAAGGTGAAAAACTAACTTACCCTATGGAAAAGTACCTTGACCCAAACAGACCGTTCAAATGTGACGTATGCAAAGAATCTTTTACGCAAAAGAACATTTTGTTAGTACACTACAATAGCGTGAGCCATTTACATAAATTGAAGCGAGCTATGCAAGAACAacagaataataataaccctCCCGTGTCGCCTGGGGCAGGCTCTGCGCCCTCTAATTTGACACTCACTCCCAAGAGTACATCGAGTGAGGAGGATGATCGCAAACGGTACAAATGTAACATTTGTAAAGTTGCGTACACCCAAGGAAGCACGCTTGACATTCACATGAGGTCAGTTCTACATCAAACACGCGCGGGCAAGTTGCAAGAGCTCGCCGCGGCCGGCCACGTGGACTTGTCAAGGCCCTTGGTAGAACAGCCGGATCGGACCGACCCCGCCAAAATCTTACAAGACGTGTTGTCGCCGAAAAATACATCCCCTTCATCTACAAGCAGTGGGGGCCCGCGTTCATCGCCCCCTGCGCGCCCAGGTAGTCCGCGATCCCCGCGCACAGGTAATACTGCGTGCGAGCGCTGTCACGGGTCATTTTCAACTGGGGAGCTACTCGAAGCACATCGAGCGACATCATGCCCGTTTGGCGATGCGCGCGCGCACTCGCCGCTAGGTGAGGCTGAAACAGCTGCTCTTGACGAGATGGTGGCCAAGGGCCACACGCCCAAACGCAATTCACAAATGTATAAGCAACTGTTAGAAACTTTCGGTTTCGATCTTGTCATGCAATACAATGAAAATCAGCGCAGAAAAATGCAAGAAGAACGGGAGATGGCGCGCGTACCTAGTCCGCCGCCACCGCCTCCTGAAGAGAAGCCCCCGGATGGTGAAAGTAAATCAACGTGTCAACATTGCAATAAAGAGTTTTCTAGTGTGTTCGTTCTTAAAACTCATTGTGAGGAAGTGCATAAAGACAAAGTACCGCTGGAATTTCTGGAGCAGTTCGCTGAACAGTTCAAATCGGAGTATGAGAGGAAGTCTGGTGCGCCGAACTCACCTCGCGCGGCTTCTCCTGCGCCGCAGGGTGAAAGGTCACCGTCTCCACGTATTGATAACAATGGAAACTTCAGTGAAAATGGGAACGCACAGGGAGATGCGCAAAATGGTGCGTTACTAGCGCAAATGCAAGACATGCAGGCAGCTTTGAACATGATCCAACTGCAGCAGCAGCTGGGGCAACTGCACCCGATGGTAGCTCAAATGCTTACGTTAGGTCTTCCTCTCGGTCTAAACGTAGGCGCACTGGCAGCGATGAACCTCCAACCGCCTCTGGTTCCGCTGATGCTGCCGCCTCCTCCATTCGACACTATGCCCTTCGCTCACGATGCTCAAATGAAACAACAGCAATTATTACAGCAGCAACAGCAGGCTAACGCTGCAGCTGGTCAAAAGAGAGCTCGTACTCGCATCACTGACGAGCAATTGAAGATTTTGCGAGCGCACTTTGACATTAACAACTCGCCCAGCGACGAGGCTATCGCGAAAATGGCCCAACAGTCTGGACTTGCTACAAAGGTAATAAAACATTGGTTCAGGAACACTCTTTTCAAGGAGCGTCAGCGGAATAAGGATTCACCGTACAACTTCAATAATCCACCTTCCACGACACTGAACCTCGAAGAGTATGAAAAGACCGGTGAAGCTAAAGTGACTACTTTGGATTCATCAGCAAGTTCAGATGAAGGCAAGCCACCGCCTGAAAAAAAGGCAAAAATCGAGGACGCCATGATAATACCACAGGAAGTAAAGTCAGAGCCTAATGATGAGCCATCCATGGAAGAGAAATACAACTCGTACGATGATCGCCACCAGGAAGATAAAAGCTTTATCTTTCCTCAAGCGCCGTCACAAAGTCCAGCACCTATAATACATACAAATGACCACCATCACCAAAACAAATCGCGACCGCAAACTCCAACGCATATGTCGCTGAACTCATTGATCCAGTCTCAGTTAGATTCAATTCCGGCTACGAGTATACCACAGCCGCCACATCCGTCGATGCTACCACCAAAAATCAATCCTAACTTCACGTCCCCAAACTCCGCGCCCCCGAACGTCCTACCTTTGACCCCGAATCGCAGCCTCAGTCCTGGCAGGGGACCGGCCGATTTCGGACTTTCCGGGGGCAATTCGAACGGATCCAACAGCTCAACGGGGTCTTCTGGCAAACGCGCCAACAGAACTAGGTTCACCGACTATCAAATAAAAGTATTACaagagttttttgaaaacaatGCCTATCCCAAAGATGATGATCTCGAATATTTATCGAAGTTACTGGGATTGAGTCCGAGAGTAATAGTGGTGTGGTTTCAAAATGCGCGCCAGAAAGCTAGAAAAGTCTATGAAAACCAGCCAGCAGCAGATCCACCTGCAAGCGCCACTGACGAAGCTAATAGATTTCAACGCACTCCAGGTCTTAATTATCAGTGCAAAAAGTGCCAATTAGTATTCCAAAGGTACTATGAACTTATAAGACATCAGAAGACTCATTGTTTTAAAGAAGAAGATGCTAAAAGATCAGCACAAGCACAGGCGGCAGCTGCTCAGGTAGCTGCCACATTGAGTAGTGAGGACTCCAACTCGAGCAATGTTGAGCACCACCCTCCACACGTACCGGTCTCGCCCGCCCCACCCCGCACACCCACTCCTGCGGCGCCCAGCTACCCAGTGTCTCCGGCACCACCAACGCCTTTAACACCCGTCACTCCACTATCACACGCACGTGAAGAAAAAGATGGAAATTTTCAATGTGATAAATGCAACCTAGTCTTCCCTCGGTTTGACTTATGGCGGGAACATCAACTTGTTCACATAATGAATCCAAATTTATTCCCCACATACCCGCCGGATTCCCCTTTTGGGATCCTTCAGCAGCACGCGCAGCTGCAACAGCTAAATGCGTCCCTTGGGAGTGATGAGGCTCGCCATCCTTTAGTGGCGGCCCTTAATCAACAAGTAGCTAAGAGGAAATTCGATGAATATGAAGAAGTGGAAACTGGTGAGCAGCCAAAAGACAAACGCTTACGAACTACTATTCTACCGGAACAACTGGATTACCTCTACCAAAAATACCAAATCGAATCTAACCCGTCACGGAAGATGCTTGAAAACATAGCACGTGAAGTTGgactaaaaaaaagagtggtacAAGTTTGGTTTCAAAATACACGAGCACGTGAGAGGAAAGGACAGTTTCGTGCGCATGCACAAGTGATAAATAAACGATGTCCGTTTTGTCCAGCTTTGTTCAAGGTGAAGAGCGCATTAGAAAGTCATTTGAGCACTAAACACGCAGATCAGTGTGCAAGAGGAGAAATCAACGTAGACGCGCTGCCCGACGAAGAATTAAGTACAGAATCAACACCGAGTTTTGGCTCCCAACAAAGTGACCGGCAGCAAAATTTTTCGCAAGCGGGGGCTCCCATGTTGCCCCCTATTTTTCCACCTTTTCACTCAGACATGGAGAAGTTTATCAAGCAGTACAGTGAGGAGTCAATGAAACGATATGTAAGTGAATTACAAGCGCATGCCGCAGCCCAACAGAACGGTGGCGGAAACAATGAAGGATCTGAGCGACGCCCAGAACATGGAAAATCGGAGATACCTTTAGATCTCAGCAAACCAGTTGATCTGTCACGACCCGGGTCGGACGCCGACGAGCGTTCTGACACAGCTTCTGAGACTATGGAGTTCTACGAGGAAGATGAGCCCACCTCGCCACTACCGGGCCAACAGCAGTCGGCGCGACCTCCTGGCAAACGATACCGAACGCAAATGTCATCCTTGCAAGTGAAGATAATGAAATCGTTATTCGGCGACTATAAAACTCCTACTATGGCCGAGTGCGAGGCGCTCGGGCGGGAAATCGGGCTGCCCAAACGCGTGGTGCAAGTTTGGTTCCAAAACGCACGTGCCAAAGAGAAGAAGGCGCGCCTGGCCGCCGGACTCATGGAGGTGTCCGACGCGCCGCCGCCGGAGGAGTGTCGAGTTTGTGACTTCAAGTACAGTCATAAGTATTCGGTGCAGGACCACGTGTTCACGCGCGGCCACATCGCGGCCGTGCGTGCGCGCCTCGAAagcggcgcgggcggcggcgAGGACAGCACGCTCGCCCTCATGCAGATGGCGGCGCGCCTCGAGAGCGGCATGGGCGGCGACCTGCACAGCGCCTTCCTGCGACCGCAGCTCGCCGGAAACGGTGAGTGCACGACTTGA
- Protein Sequence
- MWCFLRKDPLSIDKKRQRSRLCRQDTKEPIDQKPELTQEQKMMRFLEQHQQQQQQQQQQQQHVQQQSQQGPSEREEERETPGPHTCPYCNFSCSNESRLHAHVSSVHGDPSRHFICPLCQDGFKERPALERHVMQIHSVNSEGLQRLLLLVDQSHWLNGGAQSQRDESRQGDDEREISSPRSEGSADGETERCSTCNRTFRNVDELCQHQNESGHLELKQTPQGPGYVCWKKGCNRYFDAAHALQNHFREAHARNSIANMSVSEKHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRDATKCVLCGRSFRSVLALQKHVESSHPELSEEELSAFKRSLASNPLLQAAQGTALDAATAELLRKEALRTPDDDLADMEDRDSSATVADESGHNDAENSDDSIIYKDQQFLEDYLNSQTMAEDSYNDPNRKYKCHRCKVAFTRQSYLTSHNKTLLHRKGEKLTYPMEKYLDPNRPFKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQNNNNPPVSPGAGSAPSNLTLTPKSTSSEEDDRKRYKCNICKVAYTQGSTLDIHMRSVLHQTRAGKLQELAAAGHVDLSRPLVEQPDRTDPAKILQDVLSPKNTSPSSTSSGGPRSSPPARPGSPRSPRTGNTACERCHGSFSTGELLEAHRATSCPFGDARAHSPLGEAETAALDEMVAKGHTPKRNSQMYKQLLETFGFDLVMQYNENQRRKMQEEREMARVPSPPPPPPEEKPPDGESKSTCQHCNKEFSSVFVLKTHCEEVHKDKVPLEFLEQFAEQFKSEYERKSGAPNSPRAASPAPQGERSPSPRIDNNGNFSENGNAQGDAQNGALLAQMQDMQAALNMIQLQQQLGQLHPMVAQMLTLGLPLGLNVGALAAMNLQPPLVPLMLPPPPFDTMPFAHDAQMKQQQLLQQQQQANAAAGQKRARTRITDEQLKILRAHFDINNSPSDEAIAKMAQQSGLATKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGEAKVTTLDSSASSDEGKPPPEKKAKIEDAMIIPQEVKSEPNDEPSMEEKYNSYDDRHQEDKSFIFPQAPSQSPAPIIHTNDHHHQNKSRPQTPTHMSLNSLIQSQLDSIPATSIPQPPHPSMLPPKINPNFTSPNSAPPNVLPLTPNRSLSPGRGPADFGLSGGNSNGSNSSTGSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIVVWFQNARQKARKVYENQPAADPPASATDEANRFQRTPGLNYQCKKCQLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAQVAATLSSEDSNSSNVEHHPPHVPVSPAPPRTPTPAAPSYPVSPAPPTPLTPVTPLSHAREEKDGNFQCDKCNLVFPRFDLWREHQLVHIMNPNLFPTYPPDSPFGILQQHAQLQQLNASLGSDEARHPLVAALNQQVAKRKFDEYEEVETGEQPKDKRLRTTILPEQLDYLYQKYQIESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLSTKHADQCARGEINVDALPDEELSTESTPSFGSQQSDRQQNFSQAGAPMLPPIFPPFHSDMEKFIKQYSEESMKRYVSELQAHAAAQQNGGGNNEGSERRPEHGKSEIPLDLSKPVDLSRPGSDADERSDTASETMEFYEEDEPTSPLPGQQQSARPPGKRYRTQMSSLQVKIMKSLFGDYKTPTMAECEALGREIGLPKRVVQVWFQNARAKEKKARLAAGLMEVSDAPPPEECRVCDFKYSHKYSVQDHVFTRGHIAAVRARLESGAGGGEDSTLALMQMAARLESGMGGDLHSAFLRPQLAGNGECTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01230332;
- 90% Identity
- iTF_01230332; iTF_00236930; iTF_00236472; iTF_00710855; iTF_00711231; iTF_00786253; iTF_00785838;
- 80% Identity
- iTF_01230332;