Pneb044761.1
Basic Information
- Insect
- Polia nebulosa
- Gene Symbol
- -
- Assembly
- GCA_951329385.1
- Location
- OX589607.1:8870466-8872891[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00059 13 6.8 1.8 127 176 15 64 9 66 0.75 2 10 0.00015 3.3 8.8 7.6 115 171 52 108 44 115 0.58 3 10 0.00012 2.7 9.1 6.5 119 171 112 164 103 170 0.58 4 10 0.00044 9.8 7.2 8.9 114 173 156 215 150 227 0.76 5 10 6.2e-05 1.4 10.0 6.1 113 173 197 257 190 262 0.85 6 10 7.3e-05 1.6 9.8 10.2 114 177 240 303 234 317 0.76 7 10 8.4e-05 1.9 9.6 4.2 123 176 305 358 301 365 0.51 8 10 1.5e-05 0.34 12.1 6.4 120 175 358 413 355 419 0.72 9 10 4.1e-05 0.93 10.6 5.1 115 170 416 471 410 474 0.90 10 10 7e-05 1.6 9.9 2.9 120 172 470 522 467 529 0.80
Sequence Information
- Coding Sequence
- ATGGAGGCGAAGGTGACGGGACGAGCTCGACTCCTACCGGACATCAAAGAACTACAGAGGAACATCAATGACCTACAGAGGAACATCAATGGCCTACAGAGGAACATCAATAAACAACAGGGGAACATCAAAGAACTGCAGAGGAACATCACAGAACTAAAGAGGAACATCAAGGAACTACAGAGGACCATCAGTGACCTACAGAGGAACATCAATGAACTACAGAGGAACATGAAAGAACTACAGAGGAACATCAATGACCTACAGAGGAACATCAATGGCCTACAGAGGAACATCAATAAACAACAGGGGAACATCAAAGAACTGCAGAGGAACATCACAGAACTAAAGAGGAACATCAAGGAACTACAGAGGACCATCAGTGACCTACAGAGGAACATCAATGAACTACAGAGGAACATGAAAGAACTACAGAGGAACATCAATGACCTACAAAGTAACATCAATAAACTAATGAGGAACATCAAAGAACTACAGAGGAACATCAATGACCTACAGAGGAACATCAATGAACTACAGAGGAACATGAAAGAACTACAGAGGAACATCAATGACCTACAAAGTAACATCAATAAACTAATGAGGAACATCAAAGAACTACAGAGGACCATCAGTGACCTACAGAGGAACATCAATGAACTACAGAGGAACATCAAAGAACTACAGAGGAACATCAATGACCTACAAAGTAACATCAATAAACTAATGAGGAACATCAAAGAACTACAGAGGAACATCAATGACCTACAGAGGAACATCAATGAACTACAGAGGAACATCAAAGAACTACAGAGGAACATCAATGACCTACAGAGGAACATCAATGAACTACAGAGGAACATCAAAGAACTACAGAGGAACATCAATGACCTACAAAGTAACATCAATGAACTACAGAGGCACATCAAAGAAATAGAGAGGAACATCAATAACCTACAGAGGAACATCAATGAACTACAGAGGCACATCAAAGAAATAGAGAGGAACATCAATAACCTACAGAGGAACATCAATGAACTACAGAGGCACATCAAAGAAATAGAGAGGAACATCAATAACCTACAGGGGAACATCAAAGAACTACAGAGCAACATCAAAGAACTACAGCGGAACATCAAAGAACTACAGAGGAACATCAATGACCTACAGAGGAACATCAATGAACTACAGAGGAACATCAAAGAACTACAGAGGAACATCAATGACCTACAGAGGAACATCAATGAACTACAGAGGAACATCAAAGAACTACAGAGGAACATCAATGACCTACAAAGTAACATCAATGAACTACAGAGGCACATCAAAGAAATAGAGAGGAACATCAATAACCTACAGAGGAACATCAATGAACTACAGAGGCACATCAAAGAAATAGAGAGGAACATCAATAACCTACAGGGGAACATCAAAGAACTACAGAGCAACATCAAAGAACTACAGCGGAACATCAATGACCTACAGAGGAACATCAATGAACTGCAGAGGAACATCAAAGAACTACAAAGGAACATCATTGACCTACAGGGGAACATTTTAGAACTACAGAGCAACATCAAAGAGTTTGTTTAG
- Protein Sequence
- MEAKVTGRARLLPDIKELQRNINDLQRNINGLQRNINKQQGNIKELQRNITELKRNIKELQRTISDLQRNINELQRNMKELQRNINDLQRNINGLQRNINKQQGNIKELQRNITELKRNIKELQRTISDLQRNINELQRNMKELQRNINDLQSNINKLMRNIKELQRNINDLQRNINELQRNMKELQRNINDLQSNINKLMRNIKELQRTISDLQRNINELQRNIKELQRNINDLQSNINKLMRNIKELQRNINDLQRNINELQRNIKELQRNINDLQRNINELQRNIKELQRNINDLQSNINELQRHIKEIERNINNLQRNINELQRHIKEIERNINNLQRNINELQRHIKEIERNINNLQGNIKELQSNIKELQRNIKELQRNINDLQRNINELQRNIKELQRNINDLQRNINELQRNIKELQRNINDLQSNINELQRHIKEIERNINNLQRNINELQRHIKEIERNINNLQGNIKELQSNIKELQRNINDLQRNINELQRNIKELQRNIIDLQGNILELQSNIKEFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01230256;
- 90% Identity
- iTF_01230256;
- 80% Identity
- iTF_01230256;