Pcal029733.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- Myb
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010000019.1:70319-77937[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.6e-14 9.9e-11 42.5 0.1 1 45 70 119 70 120 0.86 2 3 4.3e-22 9.2e-19 68.2 2.4 1 46 126 172 126 172 0.98 3 3 8.3e-21 1.8e-17 64.1 0.3 1 44 178 221 178 223 0.96
Sequence Information
- Coding Sequence
- ATGCAGCTGTTAGGGGCGAGGGAAAGGGGAAAAGGCGAGGGTGAAGCAGATTGCACGTCTCGATCTGGTTACGATTCTAGCAGCGGCGGAGAATCTGACAACGAGTACAGCACGTTAGTTAGCCAAGCAGTTAATCAAGCACAAAATCAAGCGGAAAATCAAGTTCCCATTACTGTCACAAATTACGGACAAGGGAAACACATAAATAAAGGACGATGGACCAAAGAAGAAGACGCTTTACTGAAGCAACTAGTAAGCGGCGCGGAACAACTCGGCACTGGTTTGCGATGGGACATTATAGCCAGCCAGTTTCCAGATCGGAGCGACGTGCAGTGCCAACAGAGGTGGGCGAAGGTCGTGAACCCGGAGCTGGTCAAGGGTCCGTGGACGAAGGAGGAAGATAACAAAGTGGTTGAACTTGTACAAAAATATGGTCCGAAAAAGTGGACGTTAATAGCGCGGCATCTTAAAGGCCGAATTGGCAAACAGTGCCGAGAACGATGGCACAACCATTTGAATCCGGGGATAAAGAAAAGTGCGTGGACGGAGGCTGAAGATAAAATAATTGTCGAAGCTCATCGTAGAGTCGGTAATCAATGGGCCAAGATCGCCAAACTCTTACCAGGCAGAACTGATAATGCGATCAAGAATCATTGGAACAGCACGATGAGACGGAAATATGAAGGCAGAGGGAAGAGAAAAAGTACACAAAGCATTACCGATACACTTCTTCTGGAAGATGATCAGAATCAGATGAAGGTTGCCTCAACTAGCGGCAATAGTTCGACGATAGCGGCGAATAACTCGCAAACTCTTAACATCCAGCAATTGGATTGGGTCAGAGGCTGGGAACAAACTCTAGGGGGATACCAAGATGCGCTGCAACTAAATAGACATACGCAGGACAGCGAAAAATGCGCGTTTCCGTCCAAGAGATCGTCGCGAGCGAAAATCGAAACAGTCTCGTCGTTACCTAAATATTTCAATCTGCAACAAATGCAAAACGAAACTGGTTCGAAGAGTTCAGATATAAAATTGATACCAATGCCGGACTTGGAGGATATACCTGAGCAGCATGTGGAAAAGAAGAGCAGTCCGCCACCTATATTACGTAGACGCAAAAACGCGCACAGTTTGCTACAGAGGATAGACATTTCCGACAATGCGAATCAGTCGGATTATATCGTAACGGGTCAACAAGTGCAAACGGGAAACATTACTCCTTCGACTCCTATCAAGCAACTTCCATTCAGTCCTTCGCAATTCCTGAATAGTCTGAGTCCGGAGACATCCTGGCCACGCGCGAGTACCCCTAAAGCAAGCAGTCCTGGTCCGCTTACAACACCGCAGCCTACCGGTTTCCGACGAAGTCAAAACGACGGTAATACACCAAGAACACCGACGCCATTTAAAAACGCTTTGGCCGAGCTCGAGCGACGAACCGGAGCGGCACAGTTGCCTGCTACTCCTAGTCGTCTGGATGCTCTGACCGAGATAATAAAACAGGAGACCGACCGCGAGAGTCTAGTTGGAACGAGTGCGATTCATGAGCAAGACTCAGGTTATAGTAGCATGATACGAAGACGCGGTAAAGAGAACAGTGCACCAGGAGGAAAGCGCGCGCGCAAGGCTCTTTCTCAAGCTTGGGCACAGGACAGCTCCGACATGAGTTTTCTTGTGGAGACGCCAAGTAAAAGTTTGGATGCTTCTACGTTATTTTCGCCTGCATCTATGGCGCTGGAAGATAGTTTCTTGACAGCAGGAACTAGTCCCACAAAGACTCCCCACGACTTTATGTCCGTACAACGGAAGCCGAATGCCAAGAGAGCGATCACATTCGACGCATTCGACTGTATCGTCAGCCCTCTGCCTCTCAGGCCGGTGAAACGCATCAAGGCACAATTGGAAGCGCAATGGGTAACGGTGGCATGCGGTCGTACTCGCGATCAACTTGAGATGACTCGTGCCGCCCGACGTTTTCTGAGTAGTCACGGATACCTGCCGTTGCGCCCGCGTTCTCTGAATTTCTGA
- Protein Sequence
- MQLLGARERGKGEGEADCTSRSGYDSSSGGESDNEYSTLVSQAVNQAQNQAENQVPITVTNYGQGKHINKGRWTKEEDALLKQLVSGAEQLGTGLRWDIIASQFPDRSDVQCQQRWAKVVNPELVKGPWTKEEDNKVVELVQKYGPKKWTLIARHLKGRIGKQCRERWHNHLNPGIKKSAWTEAEDKIIVEAHRRVGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEGRGKRKSTQSITDTLLLEDDQNQMKVASTSGNSSTIAANNSQTLNIQQLDWVRGWEQTLGGYQDALQLNRHTQDSEKCAFPSKRSSRAKIETVSSLPKYFNLQQMQNETGSKSSDIKLIPMPDLEDIPEQHVEKKSSPPPILRRRKNAHSLLQRIDISDNANQSDYIVTGQQVQTGNITPSTPIKQLPFSPSQFLNSLSPETSWPRASTPKASSPGPLTTPQPTGFRRSQNDGNTPRTPTPFKNALAELERRTGAAQLPATPSRLDALTEIIKQETDRESLVGTSAIHEQDSGYSSMIRRRGKENSAPGGKRARKALSQAWAQDSSDMSFLVETPSKSLDASTLFSPASMALEDSFLTAGTSPTKTPHDFMSVQRKPNAKRAITFDAFDCIVSPLPLRPVKRIKAQLEAQWVTVACGRTRDQLEMTRAARRFLSSHGYLPLRPRSLNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00129669;
- 90% Identity
- iTF_01228301;
- 80% Identity
- -