Pbar003127.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- Myb
- Assembly
- GCA_000187915.1
- Location
- NW:1497418-1517997[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.8e-14 3.2e-11 42.4 0.1 1 45 89 138 89 139 0.86 2 3 4.5e-22 3e-19 68.1 2.4 1 46 145 191 145 191 0.98 3 3 8.7e-21 5.8e-18 64.0 0.3 1 44 197 240 197 242 0.96
Sequence Information
- Coding Sequence
- ATGATGGATATAATTCCGAATGAATTGCTCGTGCAGAATGGATTGCCGATCAACACCGTGGAGATACCGACCACCTATCACTCGTCCTTCTACTCCCCACCGGTTACAGAAGCCTCTCGATCTGGTTACGATTCTAGCAGCGGCGGAGAATCTGACAACGAGTACAGCACGTTAGTTAGCCAAGCAGTTAATCAAGCACAAAATCAAGCGGAAAATCAAGTTCCCATTACTGTCACAAATTACGGACAAGGGAAACACATAAATAAAGGACGATGGACCAAAGAAGAAGACGCTTTATTGAAGCAACTAGTAAGCGGCGCGGAACAACTCGGCACTGGTTTGCGATGGGACATTATAGCCAGCCAGTTTCCAGATCGGAGCGACGTGCAGTGCCAACAGAGGTGGGCGAAGGTCGTGAACCCGGAGCTGGTCAAGGGTCCGTGGACGAAGGAGGAAGATAACAAAGTGGTTGAacttgtacaaaaatatgGTCCGAAAAAGTGGACGTTAATAGCGCGGCATCTTAAAGGCCGAATTGGCAAACAGTGCCGAGAACGATGGCACAACCATTTGAATCCGGGGATAAAGAAAAGTGCGTGGACGGAGGctgaagataaaataattgtcgaAGCTCATCGTAGAGTCGGTAATCAATGGGCCAAGATCGCCAAACTCTTACCAGGCAGAACTGATAATGCGATCAAGAATCATTGGAACAGCACGATGAGACGGAAATATGAAGGTGATGAAGGCAGAATTACGACTAAAGGCAGAGGGAAGAGAAAAAGTACACAAAGCATTACCGATACACTTCTTCTGGAAGATGACCAGAATCAGATGAAGGTTGCCTCAACTAGCGGCAATAGTTCGACGATAGCGGCGAATAACTCGCAAACTCTTAACATCCAGCAATTGGATTGGGTCAGAGGCTGGGAACAAACTCTAGGGGGATACCAGGATGCGCTGCAACTAAATAGACATACGCAGGACAGCGAAAAATGCGCGTTTCCGTCCAAGAGATCGTCGCGAGCGAAAATCGAAACAGTCTCGTCGTTACCTAAaTATTTCAATCTGCAACAAATACAAAACGAAACTGGTTCGAAGAgttcagatataaaattgataccAATGCCGGACTTGGAGGATATACCTGAGCAGCATGTGGAAAAGAAGAGCAGTCCGCCACCTATATTACGTAGACGTAAAAACGCGCACAGTTTGCTACAGAGGATAGACATTTCCGACAATGCGAATCAGTCGGATTACATCATAACGGGTCAACAAGTGCAAACGGGAAACATTACTCCTTCGACTCCTATCAAGCAACTTCCATTCAGTCCTTCGCAATTCCTGAATAGTCTCAGTCCGGAGACATCCTGGCCACGCGCGAGTACCCCTAAAGCGAGCAGTCCTGGTCCGCTTACAACACCGCAGCCTACCGGTTTCCGACGAAGTCAAAATGacGGTAATACACCAAGAACACCGACGCCATTTAAAAACGCTTTGGCCGAGCTCGAGCGACGAACCGGAGCGGCACAGTTGCCTGCTACTCCTAGTCGTCTGGATGCTCTGACCGAGATAATAAAACAGGAGACCGACCGCGAGAGTCTAGTTGGAACGAGTGCGATTCATGAGCAAGACTCAGGTTATAGTAGCATGATACGAAGACGCGGTAAAGAGAACAGTGCACCAGGAGGAAAGCGCGCGCGCAAGGCTCTTTCTCAAGCTTGGGCACAGGACAGCTCCGACATGAGTTTTCTTGTGGAGACGCCAaGTAAAAGTTTGGATGCTTCTACGTTATTTTCGCCTGCATCTATGGCGCTGGAAGATAGTTTCTTGACAGCAGGAACTAGTCCCACAAAGACTCCCCACGACTTTATGTCCGTACAACGGAAGCCGAATGCCAAGAGAGCGATCACATTCGACGCATTCGACTGTATCGTCAGCCCTCTGCCTCTCAGGCCGGTGAAACGCATCAAGGCACAATTGGAAGCGCAATGGGTAACGGTGGCATGCGGTCGTACTCGCGATCAACTTGAGATGACTCGTGCCGCCCGACGTTTTCTGAGTAGTCACGGATACCTGCCGTTGCGCCCGCGTTCTCTGAATTTctga
- Protein Sequence
- MMDIIPNELLVQNGLPINTVEIPTTYHSSFYSPPVTEASRSGYDSSSGGESDNEYSTLVSQAVNQAQNQAENQVPITVTNYGQGKHINKGRWTKEEDALLKQLVSGAEQLGTGLRWDIIASQFPDRSDVQCQQRWAKVVNPELVKGPWTKEEDNKVVELVQKYGPKKWTLIARHLKGRIGKQCRERWHNHLNPGIKKSAWTEAEDKIIVEAHRRVGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEGDEGRITTKGRGKRKSTQSITDTLLLEDDQNQMKVASTSGNSSTIAANNSQTLNIQQLDWVRGWEQTLGGYQDALQLNRHTQDSEKCAFPSKRSSRAKIETVSSLPKYFNLQQIQNETGSKSSDIKLIPMPDLEDIPEQHVEKKSSPPPILRRRKNAHSLLQRIDISDNANQSDYIITGQQVQTGNITPSTPIKQLPFSPSQFLNSLSPETSWPRASTPKASSPGPLTTPQPTGFRRSQNDGNTPRTPTPFKNALAELERRTGAAQLPATPSRLDALTEIIKQETDRESLVGTSAIHEQDSGYSSMIRRRGKENSAPGGKRARKALSQAWAQDSSDMSFLVETPSKSLDASTLFSPASMALEDSFLTAGTSPTKTPHDFMSVQRKPNAKRAITFDAFDCIVSPLPLRPVKRIKAQLEAQWVTVACGRTRDQLEMTRAARRFLSSHGYLPLRPRSLNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00129669;
- 90% Identity
- iTF_01228943;
- 80% Identity
- -