Pcal032918.1
Basic Information
- Insect
- Pogonomyrmex californicus
- Gene Symbol
- ATFC
- Assembly
- GCA_017141365.1
- Location
- JAEVLP010005052.1:162526-169081[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3 8e+03 -2.2 0.5 31 56 122 147 117 153 0.64 2 2 8e-15 1.2e-11 45.3 13.7 2 60 301 359 300 364 0.95
Sequence Information
- Coding Sequence
- ATGTCATCCAATCTGGACCAGGAGATGTGGTCGTGGAAGTACGAGCCGGTGTCCCCCAGTGGGACACCACCGCTAGAGGTTGATGAGGATTTGTTTTTATTCAATGATCAGTCTGTAGATGTTTCTAACAATGCTGCGGAAATTGTTATGTATGATGATCAACCTTCCCGTGCACAAGTGGCAAAAAAGCTTTTAGAAGAATTGGACGAATGGATTAAAGAAGAGCCCTTCTCGGATTGGCTAGAAGAAAAGGTAGAGCTGCCTATATACGATCAATTATTGGAGAACAGCCAAACCAAATCTCCGTCAATCATCTACCCAATTATCGTGAAGGCATCGCAGCAACATCACCACCACCAACAACAACAACAACAACAACAGCATCATGACAATACACAGACCCTTTTGCAGGAGTTTGAAACGGTTTTGGGTGATGTCGAAGCTTGCCATCAGATCGTCCCGCCAAACAGCTCGACGCTCACTCCTCCACAATCACCCCCGCATAAAGCGATCAATGTGGACACACAGCTGCTAGTCACCCTGCAGCCTGTACAACCATTATTTGATGGCAATCAATCGATATACAATATCGTTCCAACAGAAGAACCACTGTATGCGAGTGATACGCCGCGTCAGTGGAATGCTGAAGATATATCGCTAAGTCCACTCGGCGGGGACGATGTTGCGAACGACTTAGCAGTGGTGGATGAATATGTTCGGTCGCACACCAAGGATATACCGTCACCCTCAAGTCCATGCAGTTCCGGTGGCAGTTGTACCTCGGCCGAAGATTCCGCTGACGATCCCGATTGGAGTTTCGAAACTGAAAGAAGAAATTTCAAACAATCAGTTCACGATTCTTCGAAACATCGTCATAAACCATATTCTCGATCCTCCCTCGAAGACAAGAAGGTGCGGAAGAAAGAACAGAATAAGAACGCGGCCACGCGTTACAGACAGAAAAAGAAACAAGAAATTAGGGAAATACAAGGCGAAGAACGTGAACTGACAGAACAAAATGAGAAATTGAAAAATCGAGTGAAAGAAATTGAACAAGAAATAAAATATCTCAAGGGATTCATGAGGGATCTGTTAAAAGCTAAGGGTCTTCTTAAGTAA
- Protein Sequence
- MSSNLDQEMWSWKYEPVSPSGTPPLEVDEDLFLFNDQSVDVSNNAAEIVMYDDQPSRAQVAKKLLEELDEWIKEEPFSDWLEEKVELPIYDQLLENSQTKSPSIIYPIIVKASQQHHHHQQQQQQQQHHDNTQTLLQEFETVLGDVEACHQIVPPNSSTLTPPQSPPHKAINVDTQLLVTLQPVQPLFDGNQSIYNIVPTEEPLYASDTPRQWNAEDISLSPLGGDDVANDLAVVDEYVRSHTKDIPSPSSPCSSGGSCTSAEDSADDPDWSFETERRNFKQSVHDSSKHRHKPYSRSSLEDKKVRKKEQNKNAATRYRQKKKQEIREIQGEERELTEQNEKLKNRVKEIEQEIKYLKGFMRDLLKAKGLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00127201;
- 90% Identity
- iTF_01228150;
- 80% Identity
- -