Pbar003280.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- ATFC
- Assembly
- GCA_000187915.1
- Location
- NW:1202446-1210797[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3 2.7e+03 -2.3 0.4 32 56 122 146 115 152 0.64 2 2 7.2e-15 3.7e-12 45.3 13.7 2 60 300 358 299 363 0.95
Sequence Information
- Coding Sequence
- ATGTCATCCAATCTGGACCAGGAGATGTGGTCGTGGAAGTACGAGCCGGTGTCCCCCAGTGGGACACCACCGCTAGAGGTTGATGaggatttgtttttattcaatgATCAGTCTGTAGATGTTTCTAACAATGCTGCGGAAATTGTTATGTATGATGATCAACCTTCCCGTGCACAAGTGGCAAAAAAGCTTTTAGAAGAATTGGACGAATGGATTAAAGAAGAGCCCTTCTCGGATTGGCTAGAAGAAAAGGTAGAGCTGCCTATATACGATCAATTATTGGAGAACAGCCAAACCAAATCTCCGTCAATCATCTACCCAATTATCGTGAAGGCATCGCAGCAACATCACCACCaccaacaacaacaacaacaacagcatcATGACAATACACAGACCCTTTTGCAGGAGTTTGAAACGGTTTTGGGTGATGTCGAAGCTTGCCATCAGATCGTCCCGCCAAACAGTTCGACGCTCACTCCTCCACAATCACCCCCGCATAAAGCGATCAATGTGGACACGCAACTGCTAGTCACCCTGCAGCCTGTACAACCATTATTTGATGGCAATCAATCGATATACAATATCGTTCCAACAGAAGAACCACTGTATGCGAATGATACGCCGCGTCAGTGGAATGCTGAAGATATATCGCTAAGTCCACTCGGCGGGGACGATGTTGCGAACGACTTAGCAGTGGTGGATGAATATGTCCGGTCGCACACCAAGGATATACCGTCACCCTCAAGTCCATGCAGTTCCGGTGGCAGTTGTACCTCGGCCGAAGATTCCGCTGACGATCCCGATTGGAGTTTCGAAactgaaagaagaaatttcaaacaatCAGTTCACGATTCTTCAAAACATCGCCATAAACCATATTCTCGATCCTCCCTCGAAGACAAGAAAGTGCGGAAGAAAGAACAGAATAAGAACGCGGCCACACGTTACagacagaaaaagaaacaggAAATTAGGGAAATACAAGGCGAAGAACGTGAACTGACAGAGCAAaatgagaaattgaaaaatcgagTGAAAGAAAttgaacaagaaataaaatatctcaaaggATTCATGAGGGATCTGTTAAAAGCTAAGGGTCTTCTTAAGTAA
- Protein Sequence
- MSSNLDQEMWSWKYEPVSPSGTPPLEVDEDLFLFNDQSVDVSNNAAEIVMYDDQPSRAQVAKKLLEELDEWIKEEPFSDWLEEKVELPIYDQLLENSQTKSPSIIYPIIVKASQQHHHHQQQQQQQHHDNTQTLLQEFETVLGDVEACHQIVPPNSSTLTPPQSPPHKAINVDTQLLVTLQPVQPLFDGNQSIYNIVPTEEPLYANDTPRQWNAEDISLSPLGGDDVANDLAVVDEYVRSHTKDIPSPSSPCSSGGSCTSAEDSADDPDWSFETERRNFKQSVHDSSKHRHKPYSRSSLEDKKVRKKEQNKNAATRYRQKKKQEIREIQGEERELTEQNEKLKNRVKEIEQEIKYLKGFMRDLLKAKGLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00127201;
- 90% Identity
- iTF_01228771;
- 80% Identity
- -