Pbar002095.1
Basic Information
- Insect
- Pogonomyrmex barbatus
- Gene Symbol
- lilli
- Assembly
- GCA_000187915.1
- Location
- NW:133762-296042[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0026 28 3.1 9.9 49 137 79 167 15 231 0.71 2 8 5.9e-11 6.3e-07 28.3 2.5 345 443 277 371 261 396 0.76 3 8 0.83 8.9e+03 -5.2 29.2 442 504 470 527 449 558 0.54 4 8 1 1.1e+04 -9.0 18.4 99 183 569 648 530 678 0.31 5 8 0.0061 65 1.8 12.9 425 480 667 722 662 727 0.68 6 8 0.0086 91 1.3 8.6 422 502 759 839 725 848 0.65 7 8 0.016 1.8e+02 0.4 4.0 133 254 1093 1148 978 1172 0.58 8 8 0.016 1.7e+02 0.5 3.4 169 219 1313 1363 1235 1403 0.47
Sequence Information
- Coding Sequence
- ATGCCGAGCCACAAGCCAGCGCAAGCCATGAAGAAGCCGCCACGTGTGGACCGGGAACGGCTTCGGGAGCGAGAGCGACAGGCCCGCGCGGCGATGTCGGTCCAGGCGGAGCAGGCGACTGCGGGAGGCGGTCCTGATACGAGACACCATCATCACCACAACCATACGCATCATCATCCCATGGTCAGCGCGCCGAACCTCTTCCGTGCCCCAGTCAGGgtGAATCCTGATCCAGAAATCCAGTCTAAACTGGGCAACTATTTGTTGGTGAAGCACCTGCTCGACGACTCTAAGCGCCTAATTGGCATCGATGGAATTCCGCCGAGTCCAGCTCCTCCCACCCCGACAAGTCCGCCCTCCACCCACAAGAGTGGTAGCTCTAGTGGTAGTAGCTCCAGCAAGAGGGATTGTTCCCCGTCTTCGGGGCAGGAGTTTAAGAAACCCGGTGGTTTCCGTAGCACGAGTAGCTCGAGCGCGTCTTCCTCTTCGAGCGCGAACCACCAGCAGCGGGGTGGTTTTGTCAAGCCCGCCGACGGAAAGCCGCCCTACGGTGGACGGGGCGGCTATTCCGGCCCGTCTATCAAGCACGGCGGCGGCAGCAATGATCATCGCAGTCATGGTTTACTTCCGGCCAAGGgcccgccgccgtcgtcgtcgtcccaGCCGCACCCACCCTCTCCTGTAGGGAGCAGCGGCACCCTGCCCATTGGCAATTCTAGCGGAAGTGTCGGCAATCCCGGTACCAGTAGTGGCCTCGCGAGCCGCACTCAATTCGCCGGCCGATTGAAGCTGATCGAAGTTAACggATCTAGTTCTCGACCGACGATCGACACTCCGGATGTAGAGAACATTCTGAAGGAGATGACCGTGCCACTCACACCATTGACGGCGATCGCACAGACACCGCGGAAAGAGCACGAGTCCAAGTTCACCTTCAACCCCCATCTGGCTAAGTTGACGGAAGTCACGGCGCCAGAGCCTGCGAAGCCTCAACGCCAGCATGCCCCCAACAGACTGTCTGCCGATCTCGCCCGGGATCTAAGTCTGTCGGACAGCGAGGATGAAGAGAATAAGGAAACATCGTCGAGACCGACGAGAGGAAACAGGACTCCGGATCTCACGGTCGTTGTTTCCATACCTTTATCGCAAATCACGATGTCCAATTCTGAGCATCGCTTGATCTCGCGTCCTTACAGTTTATCGACGCCGTTGACGTCAGCGCCGCCGCCTTTGACAGCCATGTCGCCCATAGTCATGTCACCCGTGGGGTCATGTCCGCTGTCACCCCCACGGACGATATCTGTCAGCCCGCCTAGATACTCGTCGCCTCCGCCGAAGCGGACGACTCCGGAGCGAGTGCTGTCTCCTCCACCTGTTGTCGATCATCCCTTGCAAACCACGTGCTCCCCTATGAATCCGGTCATGGGCCAATCGTCGAGTCCAGCCGAGGCGCCGCAGAGCTCCGGAAGTGCTAGCTCGAGCTCGGATTCTGGCTCGGATTCCGGCTCGGATAGCAGCGACGACtccgaggacgaggacgaccCGACGTCGGCGCCACCGCCGTCCAAAGGGCCAACGACGCCACCCTCGGTTTCACCGAAGCAGGACAATCTGGTCGAGGAACCGCCGCCCGCCGTGGAAGAGCGTCGCTGGGATCTTAGCTCTTTCTTCAATAAAACAGCGGTGCCGCATGGAGAACAAAACTCCGAATCAAAGCCGGCTCAGGATAATGCCAGACGAGAAAACACGCTTGAGACAACGACGGAGACTAGCAGATCGCACAGGGAGCAGTCTCGCGATTGGCAGCTCGATGAGGCCTTGAAGAGGACTCACATGAGTTCTCTCAGCGACAGCGATCACCATTCCGACCAGGACAAAGTTCGTCAGCTGGTCGAGGATAATCGCTCTCAAAGCGAGAAACCGAAGGCAGCCGATACCAGAAAACGCGGGCGACCCAGGAAATCTATCAAGAGCCCGAAACGTGGCCATCGGACGGACGAGAATCTGAAGAAGCAGCACACCACGCAGTCACGCAGGCCATGCAGCCGGACGAGAACGGTTGGTACTCCCAACAAGAAAAGCAACAAGCAACCTAAATCGAAGGAAACGGTGACTACGAGTGACGACGACAGCGATTCGAGATCGCAGAGTGACTCTGACAGCGATCGTCGGCCTACCAAGGTTGTGGTGCCGACAAGAAACGAAAAGAGACCGAGACTGAGTTTGTCGTCCAGCGACGATGAAAGTTCGCCAccgaataagaaaaataataacagtgCCTCCGAAGACGATGCCGCGCGGTGGACAAGAGTGCCTCCCATTAAACGGAACAACCTGTTGGACTCGCCGAAGAAGCAAGATCAGAAAAAGAATTCTGCCAAGGGTAAGCCCAGGCAGTCGAGGAGAGTGACCAACGTTACCGGTGGCTCGGACTCTGATAGCGAATCCGAGGAGGTATCTGTGAGGACCAGCAATTGCATCAAAGTTGCTcgggTACCCCCCAGACCTCGAGCACCACCAACGAGGACAACCTCGCCTGATAACTCCGATAGCGATAATAGTCCGGCGTCGAAGCTACAAGAGGACGACGCCGGCAACGtgcaagataaaaagaaaagcgaCACGCTGCGCCACGTCTTCTCGACGTCAAAAGGCGGCGGGAAGGGTGGTGGGAAAGGTGGGAAAGGTGGGAAAGGCGGTGGTAAATGCGGCATCTACGTGGAAGAGTATACTAGTAATTCTGCTACGCACACGCCGACCGGCGGGGACAGTCCTTACAAAAGACCATCCTCGCGGACGTCGAGTGGTGGTAACAATATTCTTTTACGCTCGCCTCCGGCACTCACTCATGTCAATGGTGTGCCAAGTCTCCTATGCAAGATCGATCTTGGCAGAATATCTTCgcaaatattgcaattatcaAGAGGGCAAGAGCTCAGACAACGCACGGAATTACCTGATACCAGGCCGTCTTCGAGGCAAAGGCCATCCTCCAGTTTGGCGACCTCGCAACCGGCGAGACTTTCCACACCGGAGGAAGGTGAGATCGTCGACACGCCGCCATCGCAACAGATCGTGTCGGATCGCGCGAGGATCCACCCGCGAGGTTCGGACGGACTGCTGGGCGATGGTGATGTCGGCAGAAGTTCACGTTCCGTGATCAAGGGCCAGCCGATATCATCGGACTCGAAGAGCGGCGGTACAGCTCTCGGAGGTGCTGGTAGTGCTAGTGGTACCGGTGCGATCGGTAGCGGTAGCGCGCCCAAGAGAAAACGTAATCCGAGTTGTAGTTCCGTGTCCAGTTTGAGTCCTGTTCAGTGTTCAGTGGACGCGAAAACCAAGAGTTCTTCTGAACATAAAGATAGAAGTCAACGCAAGAGACAACGGAGACATGGCGCGAATGACGGGCTGATGTCCAGTCAGAGTGATATTCATCCGACGAATCACGAAAGGGACGAGAAACAAGATACGAGTTTATTACCGCCACCCCCTCTCCCAGCACAGCGCGTCTACTATTCTTACTTTGATcctcaaaatgaaatattggaGGATCAGGATAGCGTACCCTTATATTTGTGTCTCAGGGACCACGATCAGTACCTGACTGAAGCTAAACGACTAAAGCACAATGCCGATGAGGAAAATGATCTTACGGCACAAGGTATGATGTATCTGGAGGCCGCTCTGTACTTCCTCCTAACTGGCGACGCGATGGAATCAGACCCACTTACGGAAAAAGCCTCGTATACTATGTACAAAGATACCCTCAGTCTTATCAAATACATCTCGTCAAAATTCAAGAGCCAATCCAACAATTCACCCGAGAATAGTATACACACTAAACTCGCCATCCTGAGTCTTTGGTGCCAGTCACGTTTGTATTCCAAGCTCTACAACATGCGAAAACAGGAAGTGAAAGAGGTTCAAAAAATCATCAGCGATTTTAATCAAAAGcaaGCAGCTCAACAATCAGCAGCAGCTCAGACAACGCCCGCTCAGACTGAGGGACAGGGTACACCTTCTCTTTCGCCTACTCCGTCGCCTGCCGGTTCCGTAGGTTCTGTCGGTAGTCAAAGTTCTTCTGGATATAGTAGCGGTGGACAACACCCGACAACGGGTGTCGTCAACGGCCAATATATCAGCGTACCGATGCATGTCTACAACGCAATGTTGAAGCAGAATCAGTATTCAGGTTTACTTACTAACGGACACGACCTGTGGGATCAGGCATTAAAGCAAGCGAAGCAGGAAGAGAACAGAAACTTTTTCATCGACTTGGACCGAAGATTGGGACCCCTGACATCATACAGCTCGTTACGCGAGCTCGTACGTTACGTTCAAGCGGGTATAAAGAAATTGCGAGCTCTCTGA
- Protein Sequence
- MPSHKPAQAMKKPPRVDRERLRERERQARAAMSVQAEQATAGGGPDTRHHHHHNHTHHHPMVSAPNLFRAPVRVNPDPEIQSKLGNYLLVKHLLDDSKRLIGIDGIPPSPAPPTPTSPPSTHKSGSSSGSSSSKRDCSPSSGQEFKKPGGFRSTSSSSASSSSSANHQQRGGFVKPADGKPPYGGRGGYSGPSIKHGGGSNDHRSHGLLPAKGPPPSSSSQPHPPSPVGSSGTLPIGNSSGSVGNPGTSSGLASRTQFAGRLKLIEVNGSSSRPTIDTPDVENILKEMTVPLTPLTAIAQTPRKEHESKFTFNPHLAKLTEVTAPEPAKPQRQHAPNRLSADLARDLSLSDSEDEENKETSSRPTRGNRTPDLTVVVSIPLSQITMSNSEHRLISRPYSLSTPLTSAPPPLTAMSPIVMSPVGSCPLSPPRTISVSPPRYSSPPPKRTTPERVLSPPPVVDHPLQTTCSPMNPVMGQSSSPAEAPQSSGSASSSSDSGSDSGSDSSDDSEDEDDPTSAPPPSKGPTTPPSVSPKQDNLVEEPPPAVEERRWDLSSFFNKTAVPHGEQNSESKPAQDNARRENTLETTTETSRSHREQSRDWQLDEALKRTHMSSLSDSDHHSDQDKVRQLVEDNRSQSEKPKAADTRKRGRPRKSIKSPKRGHRTDENLKKQHTTQSRRPCSRTRTVGTPNKKSNKQPKSKETVTTSDDDSDSRSQSDSDSDRRPTKVVVPTRNEKRPRLSLSSSDDESSPPNKKNNNSASEDDAARWTRVPPIKRNNLLDSPKKQDQKKNSAKGKPRQSRRVTNVTGGSDSDSESEEVSVRTSNCIKVARVPPRPRAPPTRTTSPDNSDSDNSPASKLQEDDAGNVQDKKKSDTLRHVFSTSKGGGKGGGKGGKGGKGGGKCGIYVEEYTSNSATHTPTGGDSPYKRPSSRTSSGGNNILLRSPPALTHVNGVPSLLCKIDLGRISSQILQLSRGQELRQRTELPDTRPSSRQRPSSSLATSQPARLSTPEEGEIVDTPPSQQIVSDRARIHPRGSDGLLGDGDVGRSSRSVIKGQPISSDSKSGGTALGGAGSASGTGAIGSGSAPKRKRNPSCSSVSSLSPVQCSVDAKTKSSSEHKDRSQRKRQRRHGANDGLMSSQSDIHPTNHERDEKQDTSLLPPPPLPAQRVYYSYFDPQNEILEDQDSVPLYLCLRDHDQYLTEAKRLKHNADEENDLTAQGMMYLEAALYFLLTGDAMESDPLTEKASYTMYKDTLSLIKYISSKFKSQSNNSPENSIHTKLAILSLWCQSRLYSKLYNMRKQEVKEVQKIISDFNQKQAAQQSAAAQTTPAQTEGQGTPSLSPTPSPAGSVGSVGSQSSSGYSSGGQHPTTGVVNGQYISVPMHVYNAMLKQNQYSGLLTNGHDLWDQALKQAKQEENRNFFIDLDRRLGPLTSYSSLRELVRYVQAGIKKLRAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01406484;
- 90% Identity
- -
- 80% Identity
- -